Miyakogusa Predicted Gene
- Lj2g3v1549970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1549970.1 Non Characterized Hit- tr|I1L582|I1L582_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51172
PE,86.39,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; helicase superfamily ,CUFF.37404.1
(708 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 1127 0.0
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 395 e-110
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 332 8e-91
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 332 9e-91
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 331 2e-90
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 305 1e-82
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 197 3e-50
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 160 4e-39
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 160 4e-39
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 160 4e-39
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 160 5e-39
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 2e-13
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 2e-13
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 8e-11
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 67 8e-11
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 3e-10
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 4e-10
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 63 1e-09
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 63 1e-09
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-09
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-09
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-09
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 1e-08
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 2e-08
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 4e-08
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 5e-08
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 57 6e-08
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 1e-07
Medtr6g007530.1 | DNA helicase, putative | LC | chr6:1634549-163... 55 3e-07
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 54 7e-07
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 54 7e-07
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 53 9e-07
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 53 9e-07
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 3e-06
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 3e-06
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 3e-06
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 4e-06
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 5e-06
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/705 (78%), Positives = 599/705 (84%), Gaps = 23/705 (3%)
Query: 4 MDNYDVQEELLNIEVEIQDVQDQINALIERQERLYERKSELSDILEACRESGNQVNNVAQ 63
M+NY+V EEL N+E EI+DVQ++I ALIE+QERLYERKSEL+ IL+AC+ES NQVNN A
Sbjct: 1 MENYEVLEELHNVEAEIEDVQEKIRALIEKQERLYERKSELNSILDACKESENQVNNAAS 60
Query: 64 TT-VENWNGPFQWDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLC 122
++ VENWNG F+WDS+ADDLRLNIFGISSYR NQ+EI+NA+LSGRDVLVIMAAGGGKSLC
Sbjct: 61 SSAVENWNGTFEWDSQADDLRLNIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLC 120
Query: 123 YQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEK-FIYKALEKGE 181
YQLPAVLR+G+ALVVSPL+SLIQDQVMGLTALGIPA+ LTSTTSK++EK +I +
Sbjct: 121 YQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRAR 180
Query: 182 GELKILYVTPEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGIL 241
G+LK+LYVTPEKI+K + I EAHCCSQWGHDFRPDYKNLGIL
Sbjct: 181 GDLKLLYVTPEKITKKQE------------------IYEAHCCSQWGHDFRPDYKNLGIL 222
Query: 242 KVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 301
K QFPNVPMVALTATATQRVQNDLVEMLHI RCVKFVSTVNRPNLFYMVKEKSSV KVV+
Sbjct: 223 KTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVV 282
Query: 302 DEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRW 361
DEIAEFIQESYPN ESGIVYCFSRKECEQVAKELRERGISA HYHADMDVN REKVHMRW
Sbjct: 283 DEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRW 342
Query: 362 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRP 421
SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSEC+LYFRP
Sbjct: 343 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 402
Query: 422 GDAPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFPN 481
GD PRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAF
Sbjct: 403 GDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFSC 462
Query: 482 EVTQVDVSGHAKLMVSLLQDMQGNDQRATMLQLFDKMKIKQKELGTELKRXXXXXXXXXX 541
EV +VDVS HAKLMVSLLQD+Q +DQR+TMLQL +KMK KQKE+G+ LKR
Sbjct: 463 EVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKTKQKEIGSYLKREEMEQLILHL 522
Query: 542 XXXXXXXXXFQHTPYATNAYVAVGPLAKQILQGKKTVKLEIYAEERTKAGVRSLKRCHGS 601
FQHT Y+TNAY+ VGPLAKQILQGKKTVKLEI EE+TKA R LKR G
Sbjct: 523 LLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEISTEEKTKASAR-LKRSLG- 580
Query: 602 SSSGXXXXXXXXXXXXASVHGGILPHSVLSTQQISLLCSQKPNLLEQLEKVIGKLKTEKY 661
SSG +S HGGILPHSVLSTQQISLLCSQKPN LE+LEK IGKLKTEKY
Sbjct: 581 -SSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEELEKAIGKLKTEKY 639
Query: 662 GKRILEQIEKYSDFKPTDEQVTDGRAAKRSKTKKNLVVIDSSEDE 706
G +IL QI KYSDF+ TDEQV DGRAAKRSKTKKNLV+I++SEDE
Sbjct: 640 GNKILAQIVKYSDFELTDEQVNDGRAAKRSKTKKNLVLIETSEDE 684
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/470 (44%), Positives = 288/470 (61%), Gaps = 30/470 (6%)
Query: 57 QVNNVAQTTVENWNG-PFQWDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAA 115
+VN + + + W+ F W E + +FG S+R NQRE++NA +SG DV V+M
Sbjct: 373 EVNYIEGSGDKRWSSRDFSWTKELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVLMPT 432
Query: 116 GGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYK 175
GGGKSL YQLPA++ GI LV+SPL+SLIQDQ+M L IPA L++ +++ I +
Sbjct: 433 GGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANLEWAEQQEILR 492
Query: 176 ALEKGEGELKILYVTPEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY 235
L + K+LYVTPEK+++S + ++E H LS I IDEAHC SQWGHDFRPDY
Sbjct: 493 ELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFRPDY 552
Query: 236 KNLGILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSS 295
+ LG+LK +FPN P++ALTATAT V+ D+V+ L + CV F + NRPNL+Y V K+
Sbjct: 553 QGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT- 611
Query: 296 VGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNARE 355
K +++I +FI+E++ + E GI+YC SR +CE+VA++L+E G YH MD + R
Sbjct: 612 --KKCLEDIDKFIRENHFD-ECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPDQRA 668
Query: 356 KVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSEC 415
V +WS +++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C
Sbjct: 669 HVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQECGRAGRDGQRSSC 728
Query: 416 VLYFRPGD-----------APRQSSMVF------YENSG------LQNLYDIVRYCQSKR 452
VLY+ D A QS+M NSG +NL +V YC++
Sbjct: 729 VLYYSYSDYIRVKHMLSVGAVEQSNMTSGYSRFNATNSGRLLETNTENLLRMVSYCENDV 788
Query: 453 QCRRSAFFRHFAEPL--QECNGMCDICAFPNEVTQVDVSGHAKLMVSLLQ 500
CRR HF E C+ CD C + DV+ AK +V L++
Sbjct: 789 DCRRLIQLVHFGEKFDSSNCHKTCDNCVKITSFVEKDVTEIAKQLVELVK 838
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 332 bits (851), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/427 (41%), Positives = 245/427 (57%), Gaps = 44/427 (10%)
Query: 87 FGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQD 146
FG +R Q E + AVLSGRD +M GGGKS+CYQ+PA+ ++GI LVV PLI+L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 147 QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIEK 206
QVM L GI A L+ST + + + I++ L G+ ++LYVTPE I+ + FMSK+ K
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLV 266
H G LSLI+IDEAHC S WGHDFRP Y+ L L+ P+VP++ALTATA +VQ D+V
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 267 EMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPN-----KESG--- 318
E LH+ + ++ NRPN++Y V+ K + + +SY + K G
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEVRYK------------DLLDDSYSDLSDRLKSMGDVC 264
Query: 319 -IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGM 377
I+YC R C+ ++ L +RGIS YHA ++ R V W ++K +V+V TVAFGM
Sbjct: 265 AIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGM 324
Query: 378 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENSG 437
GI++ DVR V H ++ KSME +YQESGRAGRD LPS +LY+ D R+ NSG
Sbjct: 325 GIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDD--RRRMEFILRNSG 382
Query: 438 -----------------LQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQE--CNGMCDICA 478
L +V YC+ CRR F E + C CD C
Sbjct: 383 NKKSQSSSSQEESTRMSLTAFNQMVEYCEGS-GCRRKIILESFGEQVTTSLCGKTCDSCR 441
Query: 479 FPNEVTQ 485
PN V +
Sbjct: 442 HPNLVAR 448
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 332 bits (851), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/427 (41%), Positives = 245/427 (57%), Gaps = 44/427 (10%)
Query: 87 FGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQD 146
FG +R Q E + AVLSGRD +M GGGKS+CYQ+PA+ ++GI LVV PLI+L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 147 QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIEK 206
QVM L GI A L+ST + + + I++ L G+ ++LYVTPE I+ + FMSK+ K
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLV 266
H G LSLI+IDEAHC S WGHDFRP Y+ L L+ P+VP++ALTATA +VQ D+V
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 267 EMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPN-----KESG--- 318
E LH+ + ++ NRPN++Y V+ K + + +SY + K G
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEVRYK------------DLLDDSYSDLSDRLKSMGDVC 264
Query: 319 -IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGM 377
I+YC R C+ ++ L +RGIS YHA ++ R V W ++K +V+V TVAFGM
Sbjct: 265 AIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGM 324
Query: 378 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENSG 437
GI++ DVR V H ++ KSME +YQESGRAGRD LPS +LY+ D R+ NSG
Sbjct: 325 GIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDD--RRRMEFILRNSG 382
Query: 438 -----------------LQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQE--CNGMCDICA 478
L +V YC+ CRR F E + C CD C
Sbjct: 383 NKKSQSSSSQEESTRMSLTAFNQMVEYCEGS-GCRRKIILESFGEQVTTSLCGKTCDSCR 441
Query: 479 FPNEVTQ 485
PN V +
Sbjct: 442 HPNLVAR 448
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 331 bits (848), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 249/416 (59%), Gaps = 22/416 (5%)
Query: 80 DDLRLN---IFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALV 136
DD+ L IFG S R Q + A L+ +D ++M GGGKSLCYQLPA L+ G+ +V
Sbjct: 187 DDIELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVV 246
Query: 137 VSPLISLIQDQVMGLT-ALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
VSPL+SLIQDQ++ L GIPA L S + + + L K + K+LYVTPE+I+
Sbjct: 247 VSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLLYVTPERIA 306
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
++ F+ ++ H G+L+ +DEAHC SQWGHDFRPDY+ LG LK FP VP++ALTA
Sbjct: 307 GNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKQNFPRVPVMALTA 366
Query: 256 TATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNK 315
TAT V+ D++ L IP + + +RPNL Y V K+ K + ++ + + + + +
Sbjct: 367 TATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKT---KEPLKQLGQLLMDRFKS- 422
Query: 316 ESGIVYCFSRKECEQVAKELRER-GISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVA 374
+ GIVYC S+ EC V+K L E+ I A +YHA + R V +W + ++ ++ T+A
Sbjct: 423 QCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIA 482
Query: 375 FGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMV--- 431
FGMGI+K DVRFVIH+++SKS+E+YYQESGRAGRD LP+ C+ ++ D R M+
Sbjct: 483 FGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMIRNG 542
Query: 432 -FYE----NSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECN-----GMCDIC 477
Y+ + + + +YC+ K +CRR HF E N CD C
Sbjct: 543 QGYKKESFKTAMAQAKKMQQYCELKDECRRQTLLEHFGESFDRKNCKYGSSPCDNC 598
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 305 bits (781), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/432 (41%), Positives = 255/432 (59%), Gaps = 29/432 (6%)
Query: 85 NIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLI 144
+ FG S+R QRE++ ++ RD LV+MA G GKSLCYQ+P ++ +VVSPLISL+
Sbjct: 10 DYFGFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISLM 69
Query: 145 QDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGE-GELKILYVTPEK-ISKSKRFMS 202
QDQVM L GI A L+S +++D Y K E G+ IL++TPEK + F S
Sbjct: 70 QDQVMALKQRGIKAEYLSS--AQKD----YTVQSKAERGQFDILFMTPEKACTIPTSFWS 123
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
+ K +SL ++DEAHC S+WGHDFR +YK L L+ +VP V LTATAT++V+
Sbjct: 124 NLLK----EGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVR 179
Query: 263 NDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYC 322
D+ L + V + +RPNLFY VK+ + G+ IDE+ E + + N S I+YC
Sbjct: 180 FDITNSLKMNNPYVVVGSFDRPNLFYGVKQFNR-GQSFIDELVEEVSKEVANGCSTIIYC 238
Query: 323 FSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKP 382
+ K+ EQ+ K L E GI+A YH MD +RE+ H + +++Q++V T+AFGMGI+KP
Sbjct: 239 TTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKP 298
Query: 383 DVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFY------EN- 435
++R VIH+ K++E+YYQESGR GRDG+ S C LY+ D + FY EN
Sbjct: 299 NIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRSDFAKGD---FYAADLKSENQ 355
Query: 436 --SGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQ-ECNGMCDICAFPNEVTQVDVSGHA 492
+ +++L +YC S CRR HF E + E G CD C + Q D+S A
Sbjct: 356 KRAVMESLLAAQQYCLSA-TCRRKFLLEHFGEKISAERCGNCDNCKVSKQ--QRDLSREA 412
Query: 493 KLMVSLLQDMQG 504
L+++ + G
Sbjct: 413 FLLMACIHSCNG 424
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 191/338 (56%), Gaps = 16/338 (4%)
Query: 86 IFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQ 145
I G S+R Q E + VL+G+ ++I+ G GKSLCYQL A++ GI LVVSPL++L+
Sbjct: 271 IHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMI 330
Query: 146 DQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIE 205
DQ+ L L I L+S + E+ L +G +K+L+V+PE+ ++ F+S I
Sbjct: 331 DQLRQLPPL-ISGALLSSAQTFEESSETLNQLR--QGTIKVLFVSPERF-LNEEFLSVI- 385
Query: 206 KCHHAGRL--SLISIDEAHCCSQWGHDFRPDYKNL--GILKVQFPNVPMVALTATATQRV 261
+G L SL+ IDEAHC S+W H+FRP + L +L ++A+TATAT
Sbjct: 386 ----SGGLAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTT 441
Query: 262 QNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVY 321
+ ++ L IPR + R NL V S + + D + + +S IVY
Sbjct: 442 LDAIMSALDIPRTNLIQNAHLRDNLCLSV---SLIKNRMKDLLVLMKSSPFAEVKSIIVY 498
Query: 322 CFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINK 381
C + E +Q+++ L + I A YH+ + R V + +NK++V+V TVAFGMG++K
Sbjct: 499 CKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDK 558
Query: 382 PDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
DV VIH+SL S+E Y QE GRAGRDG S C L++
Sbjct: 559 RDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFY 596
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 18/253 (7%)
Query: 75 WDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIA 134
W +A L FG SS + Q+E ++A + RD LV+ A G GKSLC+Q+PA+L +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 135 LVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKI 194
+V+SPLISL+ DQ + LT GI A L S + D KA+ G I+Y+ PE +
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGS--GQPDNTVEKKAM---RGMYSIVYICPETV 262
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFP-------- 246
R + ++K ++L +IDE HC S+WGHDFRP Y L +L+ F
Sbjct: 263 ---LRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLK 319
Query: 247 -NVPMVALTATATQRVQNDLVEMLHIPRCVKFV-STVNRPNLFYMVKEKSSVGKVVIDEI 304
++PM+ALTATAT+RV+ D+++ L + + V ++ RPNL +MVK + +
Sbjct: 320 FDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVKHSRTSWASYEKDF 379
Query: 305 AEFIQESYPNKES 317
E I+ NK++
Sbjct: 380 HELIKVYGGNKKA 392
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I+Y +RK+ ++AK L + G+ A Y+A + + H + N L+V+V T+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF----RPGDAPRQSSMVFYE 434
I+K +VR +IH+ +S+E YYQE+GRAGRDG ++C+LY +P P + S +
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 435 NSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPL--QECNGMCDIC 477
+ + L D RY + CR +F E Q+C +CD+C
Sbjct: 630 QAYIM-LSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCL-LCDVC 672
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 18/253 (7%)
Query: 75 WDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIA 134
W +A L FG SS + Q+E ++A + RD LV+ A G GKSLC+Q+PA+L +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 135 LVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKI 194
+V+SPLISL+ DQ + LT GI A L S + D KA+ G I+Y+ PE +
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGS--GQPDNTVEKKAM---RGMYSIVYICPETV 262
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFP-------- 246
R + ++K ++L +IDE HC S+WGHDFRP Y L +L+ F
Sbjct: 263 ---LRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLK 319
Query: 247 -NVPMVALTATATQRVQNDLVEMLHIPRCVKFV-STVNRPNLFYMVKEKSSVGKVVIDEI 304
++PM+ALTATAT+RV+ D+++ L + + V ++ RPNL +MVK + +
Sbjct: 320 FDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVKHSRTSWASYEKDF 379
Query: 305 AEFIQESYPNKES 317
E I+ NK++
Sbjct: 380 HELIKVYGGNKKA 392
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I+Y +RK+ ++AK L + G+ A Y+A + + H + N L+V+V T+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF----RPGDAPRQSSMVFYE 434
I+K +VR +IH+ +S+E YYQE+GRAGRDG ++C+LY +P P + S +
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 435 NSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPL--QECNGMCDIC 477
+ + L D RY + CR +F E Q+C +CD+C
Sbjct: 630 QAYIM-LSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCL-LCDVC 672
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 18/253 (7%)
Query: 75 WDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIA 134
W +A L FG SS + Q+E ++A + RD LV+ A G GKSLC+Q+PA+L +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 135 LVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKI 194
+V+SPLISL+ DQ + LT GI A L S + D KA+ G I+Y+ PE +
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGS--GQPDNTVEKKAM---RGMYSIVYICPETV 262
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFP-------- 246
R + ++K ++L +IDE HC S+WGHDFRP Y L +L+ F
Sbjct: 263 L---RLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLK 319
Query: 247 -NVPMVALTATATQRVQNDLVEMLHIPRCVKFV-STVNRPNLFYMVKEKSSVGKVVIDEI 304
++PM+ALTATAT+RV+ D+++ L + + V ++ RPNL +MVK + +
Sbjct: 320 FDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVKHSRTSWASYEKDF 379
Query: 305 AEFIQESYPNKES 317
E I+ NK++
Sbjct: 380 HELIKVYGGNKKA 392
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I+Y +RK+ ++AK L + G+ A Y+A + + H + N L+V+V T+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF----RPGDAPRQSSMVFYE 434
I+K +VR +IH+ +S+E YYQE+GRAGRDG ++C+LY +P P + S +
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 435 NSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPL--QECNGMCDIC 477
+ + L D RY + CR +F E Q+C +CD+C
Sbjct: 630 QAYIM-LSDCFRYGMNTSCCRAKILVEYFGEDFSHQKC-LLCDVC 672
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 18/253 (7%)
Query: 75 WDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIA 134
W +A L FG SS + Q+E ++A + RD LV+ A G GKSLC+Q+PA+L +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 135 LVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKI 194
+V+SPLISL+ DQ + LT GI A L S + D KA+ G I+Y+ PE +
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGS--GQPDNTVEKKAM---RGMYSIVYICPETV 262
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFP-------- 246
R + ++K ++L +IDE HC S+WGHDFRP Y L +L+ F
Sbjct: 263 ---LRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSLK 319
Query: 247 -NVPMVALTATATQRVQNDLVEMLHIPRCVKFV-STVNRPNLFYMVKEKSSVGKVVIDEI 304
++PM+ALTATAT+RV+ D+++ L + + V ++ RPNL +MVK + +
Sbjct: 320 FDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMVKHSRTSWASYEKDF 379
Query: 305 AEFIQESYPNKES 317
E I+ NK++
Sbjct: 380 HELIKVYGGNKKA 392
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 68/104 (65%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I+Y +RK+ ++AK L + G+ A Y+A + + H + N L+V+V T+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPG 422
I+K +VR +IH+ +S+E YYQE+GRAGRDG ++C ++ G
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCSKFYYTG 613
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 53/348 (15%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLR----------DG-IALVVSPLISL---IQDQV 148
L GRD++ I G GK+L Y LPA++ DG I LV++P L IQ +
Sbjct: 129 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEA 188
Query: 149 MGLTALGIPAHKLTSTTSKEDEKFIYKALEKG------EGELKILYVTPEKISKSKRFMS 202
A + ++ ST IY + KG + ++I+ TP R +
Sbjct: 189 TKFGA----SSRIKSTC-------IYGGVPKGPQVRDLQKGVEIIIATP------GRLID 231
Query: 203 KIEKCH-HAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRV 261
+E H + R++ + +DEA G D P + I+ P+ + +AT + V
Sbjct: 232 MLESNHTNLRRVTYLVLDEADRMLDMGFD--PQIRK--IVSQIRPDRQTLYWSATWPKEV 287
Query: 262 QNDLVEMLHIPRCVKFVSTVNRPN-----LFYMVKEKSSVGKVVIDEIAEFIQESYPNKE 316
+ + L+ P V S + N +V EK K+V ++ E I +
Sbjct: 288 EQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLV--KLLEDIMDG----S 341
Query: 317 SGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFG 376
+++ ++K C+Q+ ++LR G A H D R+ V + + K ++ T
Sbjct: 342 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAA 401
Query: 377 MGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
G++ DV++VI++ S+E Y GR GR G +F +A
Sbjct: 402 RGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANA 449
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 41/342 (11%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLT 162
L+GRD++ I G GK+L Y LPA++ VS L+Q + + L P +L
Sbjct: 235 ALTGRDLIGIAETGSGKTLSYLLPAIVH------VSAQPRLVQGEGPVVLVLA-PTRELA 287
Query: 163 STTSKEDEKF----------IYKALEKGEGELKILYVTPE-KISKSKRFMSKIEKCH-HA 210
+E KF IY KG +++ L + E I+ R + +E H +
Sbjct: 288 VQIQQEAMKFGSRSNIRCTCIYGGAPKGP-QIRDLRMGVEIVIATPGRLIDMLEAQHTNL 346
Query: 211 GRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLVEMLH 270
R++ + +DEA G F P + I+ P+ + +AT + V++ + LH
Sbjct: 347 QRVTYLVLDEADRMLDMG--FEPQIRK--IVNQIRPDRQTLYWSATWPKEVESLARQFLH 402
Query: 271 IPRCVKFVSTVNRPNLFYMVKEKSSVGKVV--------IDEIAEFIQESYPNKESGIVYC 322
P V + P L K S+ +VV + + + ++E + +++
Sbjct: 403 NPYKV----VIGSPYL----KANQSINQVVEVVTDMEKYNRLIKLLKEVM-DGSRILIFT 453
Query: 323 FSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKP 382
++K C+QV ++LR G A H D + R+ V + + + ++ T G++
Sbjct: 454 ETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVK 513
Query: 383 DVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
D++ V+++ S+E Y GR GR G +F +A
Sbjct: 514 DIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANA 555
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV----------LRDGIALVV 137
G S+ Q + L GRD++ I G GK+L Y +PA L LV+
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVL 573
Query: 138 SP---LISLIQDQVMGLTALGIPAHKLTSTT--SKEDEKFIYKALEKGEGELKILYVTPE 192
+P L + IQ++V + +++ T + K L++G I+ TP
Sbjct: 574 APTRELATQIQEEVFKFAR----SSRVSCTCLYGGAPKALQLKELDRG---ADIVVATPG 626
Query: 193 KISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVA 252
+++ M KI+ G++SL+ +DEA G F P + I+ P +
Sbjct: 627 RLNDILE-MKKID----FGQVSLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLM 677
Query: 253 LTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKV-VIDEIAE--FIQ 309
TAT + V+ ++L P VN N+ + KS V V+ ++ + ++
Sbjct: 678 YTATWPKEVRKIAGDLLVNP------VQVNIGNVDELAANKSITQYVEVVPQMEKQRRLE 731
Query: 310 ESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKL 366
+ ++E G I++C ++K C+Q+A+ + R A H D R+ V ++ K
Sbjct: 732 QILRSQERGSKIIIFCSTKKLCDQLARSI-GRTFGAAAIHGDKSQGERDWVLGQFRTGKS 790
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
++V T G++ D+R VI++ +E Y GR GR G +F
Sbjct: 791 PILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFF 843
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV----------LRDGIALVV 137
G S+ Q + L GRD++ I G GK+L Y +PA L LV+
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVL 573
Query: 138 SP---LISLIQDQVMGLTALGIPAHKLTSTT--SKEDEKFIYKALEKGEGELKILYVTPE 192
+P L + IQ++V + +++ T + K L++G I+ TP
Sbjct: 574 APTRELATQIQEEVFKFAR----SSRVSCTCLYGGAPKALQLKELDRG---ADIVVATPG 626
Query: 193 KISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVA 252
+++ M KI+ G++SL+ +DEA G F P + I+ P +
Sbjct: 627 RLNDILE-MKKID----FGQVSLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLM 677
Query: 253 LTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKV-VIDEIAE--FIQ 309
TAT + V+ ++L P VN N+ + KS V V+ ++ + ++
Sbjct: 678 YTATWPKEVRKIAGDLLVNP------VQVNIGNVDELAANKSITQYVEVVPQMEKQRRLE 731
Query: 310 ESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKL 366
+ ++E G I++C ++K C+Q+A+ + R A H D R+ V ++ K
Sbjct: 732 QILRSQERGSKIIIFCSTKKLCDQLARSI-GRTFGAAAIHGDKSQGERDWVLGQFRTGKS 790
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
++V T G++ D+R VI++ +E Y GR GR G +F
Sbjct: 791 PILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFF 843
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 53/352 (15%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
GI Q + + +LSGRD++ I G GK+L + LP ++ + P++
Sbjct: 165 GIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIRMPIVP----- 219
Query: 148 VMGLTALGI---PAHKLTSTTSKEDEKFIYKALEKGEGELK------------------- 185
G G+ P+ +L T + E+F+ E G EL+
Sbjct: 220 --GEGPFGLIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLKIVKK 277
Query: 186 ---ILYVTPEKISK--SKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGH--DFRPDYKNL 238
I+ TP ++ +K+ M+ ++ C + +++DEA G D R + +
Sbjct: 278 GVHIVVATPGRLKDMLAKKKMN-LDNCRY------LTLDEADRLVDPGFEDDIREVFDHF 330
Query: 239 GILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGK 298
K Q + +AT ++QN L P V V NL + + + +
Sbjct: 331 ---KAQRQTL---LFSATMPTKIQNFARSALVKPIIVN-VGRAGAANLDVIQEVEYVKQE 383
Query: 299 VVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
I + E +Q++ P +++C ++ + + + + L +G+ A H D D RE
Sbjct: 384 AKIVYLLECLQKTPP---PVLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAI 440
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ K V+V T G++ PD++ VI++ + +E Y GR GR G
Sbjct: 441 SSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 492
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 53/356 (14%)
Query: 84 LNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISL 143
L GI Q + + +LSGRD++ I G GK+L + LP ++ ++ P++
Sbjct: 159 LKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVP- 217
Query: 144 IQDQVMGLTALGI---PAHKLTSTTSKEDEKFIYKALEKGEGELK--------------- 185
G G+ P+ +L T + E+F+ E G EL+
Sbjct: 218 ------GEGPFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLE 271
Query: 186 -------ILYVTPEKISK--SKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGH--DFRPD 234
I+ TP ++ +K+ M+ ++ C + +++DEA G D R
Sbjct: 272 IVKKGVHIVVATPGRLKDMLAKKKMN-LDNCRY------LTLDEADRLVDLGFEDDIREV 324
Query: 235 YKNLGILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS 294
+ + K Q + +AT ++QN L P V V NL + + +
Sbjct: 325 FDHF---KAQRQTL---LFSATMPTKIQNFARSALVKPIIVN-VGRAGAANLDVIQEVEY 377
Query: 295 SVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAR 354
+ I + E +Q++ P +++C ++ + + + + L +G+ A H D R
Sbjct: 378 VKQEAKIVYLLECLQKTPP---PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEER 434
Query: 355 EKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
E + K V+V T G++ PD++ VI++ + +E Y GR GR G
Sbjct: 435 EYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 490
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV--------LRDGIALVVSPLISLIQDQ 147
Q E + L+G D+L G GK+ + +PA+ + + LV + ++L Q
Sbjct: 167 QEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQ 226
Query: 148 V---MGLTALGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKI-SKSKRFMS 202
V +G L I T TS K+D +Y+ + +L TP +I +K+ +
Sbjct: 227 VCKELG-KHLQIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRILDLAKKGVC 278
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQF--PNVPMVALTATATQR 260
++ C S++ +DEA +F+P + L +QF P ++ +AT
Sbjct: 279 VLKDC------SMLVMDEAD--KLLSPEFQPSIEQL----IQFLPPTRQILMFSATFPVT 326
Query: 261 VQNDLVEMLHIPRCVKFVSTVNRPNL--FY-MVKEKSSVGKVVIDEIAEFIQESYPNKES 317
V++ L P + + + + FY V+E+ V ++ + +Q +
Sbjct: 327 VKDFKDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVH--CLNTLFSKLQIN-----Q 379
Query: 318 GIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGM 377
I++C S E +AK++ E G S + HA M + R +V + N + +V T F
Sbjct: 380 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 439
Query: 378 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
GI+ V VI+ K+ ETY GR+GR G
Sbjct: 440 GIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 472
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV--------LRDGIALVVSPLISLIQDQ 147
Q E + L+G D+L G GK+ + +PA+ + + LV + ++L Q
Sbjct: 169 QEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQ 228
Query: 148 V---MGLTALGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKI-SKSKRFMS 202
V +G L I T TS K+D +Y+ + +L TP +I +K+ +
Sbjct: 229 VCKELG-KHLQIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRILDLAKKGVC 280
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQF--PNVPMVALTATATQR 260
++ C S++ +DEA +F+P + L +QF P ++ +AT
Sbjct: 281 VLKDC------SMLVMDEAD--KLLSPEFQPSIEQL----IQFLPPTRQILMFSATFPVT 328
Query: 261 VQNDLVEMLHIPRCVKFVSTVNRPNL--FY-MVKEKSSVGKVVIDEIAEFIQESYPNKES 317
V++ L P + + + + FY V+E+ V ++ + +Q +
Sbjct: 329 VKDFKDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVH--CLNTLFSKLQIN-----Q 381
Query: 318 GIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGM 377
I++C S E +AK++ E G S + HA M + R +V + N + +V T F
Sbjct: 382 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 441
Query: 378 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
GI+ V VI+ K+ ETY GR+GR G
Sbjct: 442 GIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 474
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 141/359 (39%), Gaps = 62/359 (17%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLR----------DGIALVVSP---LISLIQDQVM 149
L +D++ I G GK+L Y LPA + LV+SP L + IQD+ +
Sbjct: 198 ALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAV 257
Query: 150 GLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELK-------ILYVTPEKISKSKRFMS 202
S TS+ +Y KG +LK I+ TP +++ M
Sbjct: 258 KF-----------SKTSRIACTCLYGGAPKGP-QLKDIDRGADIVVATPGRLNDILE-MR 304
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVP----MVALTATAT 258
+I H +S + +DEA G F P + + VP + TAT
Sbjct: 305 RIS-LHQ---VSYLVLDEADRMLDMG--FEPQIRKI------VNGVPARRQTLMFTATWP 352
Query: 259 QRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI------DEIAEFIQESY 312
+ V+ ++L P VN N+ +V KS + + E I S
Sbjct: 353 KEVRRIAADLLVNP------VQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQ 406
Query: 313 PNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGT 372
I++C ++K C+Q+A+ L R A H D R+ V ++ + + V+V T
Sbjct: 407 DQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVAT 465
Query: 373 VAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMV 431
G++ D+R V++ +E Y GR GR G +F DA S ++
Sbjct: 466 DVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLI 524
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 141/359 (39%), Gaps = 62/359 (17%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLR----------DGIALVVSP---LISLIQDQVM 149
L +D++ I G GK+L Y LPA + LV+SP L + IQD+ +
Sbjct: 198 ALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAV 257
Query: 150 GLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELK-------ILYVTPEKISKSKRFMS 202
S TS+ +Y KG +LK I+ TP +++ M
Sbjct: 258 KF-----------SKTSRIACTCLYGGAPKGP-QLKDIDRGADIVVATPGRLNDILE-MR 304
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVP----MVALTATAT 258
+I H +S + +DEA G F P + + VP + TAT
Sbjct: 305 RIS-LHQ---VSYLVLDEADRMLDMG--FEPQIRKI------VNGVPARRQTLMFTATWP 352
Query: 259 QRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI------DEIAEFIQESY 312
+ V+ ++L P VN N+ +V KS + + E I S
Sbjct: 353 KEVRRIAADLLVNP------VQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQ 406
Query: 313 PNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGT 372
I++C ++K C+Q+A+ L R A H D R+ V ++ + + V+V T
Sbjct: 407 DQGSKIIIFCSTKKMCDQLARNL-TRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVAT 465
Query: 373 VAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMV 431
G++ D+R V++ +E Y GR GR G +F DA S ++
Sbjct: 466 DVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLI 524
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 43/332 (12%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTA-- 153
Q E + L+G D+L G GK+ + +PA+ + V ++ L+ + + L
Sbjct: 176 QEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTRELALQTSQ 235
Query: 154 --------LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKI-SKSKRFMSK 203
L I T TS K+D +Y+ + +L TP +I +K+ +
Sbjct: 236 VCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRILDLAKKGVCV 288
Query: 204 IEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQF--PNVPMVALTATATQRV 261
++ C S++ +DEA +F+P + L +QF N ++ +AT V
Sbjct: 289 LKDC------SMLVMDEAD--KLLSPEFKPSIEQL----IQFLPSNRQILLFSATFPVTV 336
Query: 262 QNDLVEMLHIPRCVKFVSTVNRPNL--FY-MVKEKSSVGKVVIDEIAEFIQESYPNKESG 318
++ L P + + + + FY V+E+ V ++ + +Q +
Sbjct: 337 KDFNDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVH--CLNTLFSKLQIN-----QS 389
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I++C S E +AK++ E G S + HA M + R +V + N + +V T F G
Sbjct: 390 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRG 449
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
I+ V VI+ K+ ETY GR+GR G
Sbjct: 450 IDIQAVNVVINFDFPKNSETYLHRVGRSGRFG 481
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 38/348 (10%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV------------LRDGIAL 135
GI+ QR ++ + GRD++ G GK+L + +P + RD +AL
Sbjct: 108 GIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLAL 167
Query: 136 VVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEK-I 194
V++P L + QV P ++ S I + + K + I+ TP + I
Sbjct: 168 VLAPTRELAR-QVEKEFKDAAPNLEIISLYGGMP---IQQQISKLGSGVDIVVGTPGRVI 223
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALT 254
KR K++ ++ + +DEA Q G F+ + IL+ + +
Sbjct: 224 DLLKRGSLKLKDVNY------VVLDEADQMLQVG--FQEAVET--ILQKLPSKRQTLMFS 273
Query: 255 ATATQRVQNDLVEMLHIPRCVKFVSTVNRP-----NLFYMVKEKSSVGKVVIDEIAEFIQ 309
AT ++N L+ P + V ++ +L+ + S +++ I E
Sbjct: 274 ATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITE--- 330
Query: 310 ESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVI 369
+ IV+ ++++ ++++ + + I + H D+ RE+ + N+ V+
Sbjct: 331 --HAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVL 387
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVL 417
V T G++ P+V VIH+ L + E + SGR GR G +L
Sbjct: 388 VATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAIL 435
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 38/348 (10%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV------------LRDGIAL 135
GI+ QR ++ + GRD++ G GK+L + +P + RD +AL
Sbjct: 108 GIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLAL 167
Query: 136 VVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEK-I 194
V++P L + QV P ++ S I + + K + I+ TP + I
Sbjct: 168 VLAPTRELAR-QVEKEFKDAAPNLEIISLYGGMP---IQQQISKLGSGVDIVVGTPGRVI 223
Query: 195 SKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALT 254
KR K++ ++ + +DEA Q G F+ + IL+ + +
Sbjct: 224 DLLKRGSLKLKDVNY------VVLDEADQMLQVG--FQEAVET--ILQKLPSKRQTLMFS 273
Query: 255 ATATQRVQNDLVEMLHIPRCVKFVSTVNRP-----NLFYMVKEKSSVGKVVIDEIAEFIQ 309
AT ++N L+ P + V ++ +L+ + S +++ I E
Sbjct: 274 ATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITE--- 330
Query: 310 ESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVI 369
+ IV+ ++++ ++++ + + I + H D+ RE+ + N+ V+
Sbjct: 331 --HAKGGKCIVFTQTKRDADRLS-HIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVL 387
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVL 417
V T G++ P+V VIH+ L + E + SGR GR G +L
Sbjct: 388 VATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAIL 435
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 51/344 (14%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV--------LRDG---IALVVSPLISLI 144
Q + + LSGRD+L G GK+ + +P + +R G +ALV++P L
Sbjct: 112 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 171
Query: 145 QDQVMGLTALGIPAHKLTSTTSKEDEKFIYKA------LEKGEGELK----ILYVTPEKI 194
Q Q+ K S+ E F +EK EL+ I TP
Sbjct: 172 Q-QI----------EKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATP--- 217
Query: 195 SKSKRFMSKIEKCHHA-GRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVAL 253
RF+ +++ + + R+S + +DEA G F P + I++ +
Sbjct: 218 ---GRFIDHLQQGNTSLSRISYVVLDEADRMLDMG--FEPQIRE--IMRSLPEKHQTLLF 270
Query: 254 TATATQRVQNDLVEMLHIPRCVKF----VSTVNRPNLFYMVKEKSSVGKVV---IDEIAE 306
+AT ++ E L P VK T N V E + +++ ++E ++
Sbjct: 271 SATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLVEEASQ 330
Query: 307 FIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKL 366
+ +P + IV+ + C++VA+ L +G+SA H + RE + ++
Sbjct: 331 AEKCGHPFPLT-IVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSST 389
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
++V T G++ V VI+ L K+ E Y GR GR G
Sbjct: 390 SILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAG 433
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 51/344 (14%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAV--------LRDG---IALVVSPLISLI 144
Q + + LSGRD+L G GK+ + +P + +R G +ALV++P L
Sbjct: 143 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 202
Query: 145 QDQVMGLTALGIPAHKLTSTTSKEDEKFIYKA------LEKGEGELK----ILYVTPEKI 194
Q Q+ K S+ E F +EK EL+ I TP
Sbjct: 203 Q-QI----------EKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATP--- 248
Query: 195 SKSKRFMSKIEKCHHA-GRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVAL 253
RF+ +++ + + R+S + +DEA G F P + I++ +
Sbjct: 249 ---GRFIDHLQQGNTSLSRISYVVLDEADRMLDMG--FEPQIRE--IMRSLPEKHQTLLF 301
Query: 254 TATATQRVQNDLVEMLHIPRCVKF----VSTVNRPNLFYMVKEKSSVGKVV---IDEIAE 306
+AT ++ E L P VK T N V E + +++ ++E ++
Sbjct: 302 SATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDRLLDLLVEEASQ 361
Query: 307 FIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKL 366
+ +P + IV+ + C++VA+ L +G+SA H + RE + ++
Sbjct: 362 AEKCGHPFPLT-IVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSST 420
Query: 367 QVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
++V T G++ V VI+ L K+ E Y GR GR G
Sbjct: 421 SILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAG 464
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 142/330 (43%), Gaps = 45/330 (13%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLT 162
VLSGRD++ I G GK+ + LP + + ++ P + Q + + + P +L
Sbjct: 265 VLSGRDIIGIAKTGSGKTAAFVLPMI----VHIMDQPEL---QKEEGPIGVICAPTRELA 317
Query: 163 STTSKEDEKF----------IYKALEKGE--GELK----ILYVTPEKISKSKRFMSKIEK 206
E +KF +Y + K E ELK I+ TP ++ M K+ K
Sbjct: 318 HQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLID----MLKM-K 372
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL-GILKVQFPNVPMVALTATATQRVQNDL 265
R + + +DEA G F P +++ G ++ P+ + +AT ++V+
Sbjct: 373 ALAMLRATYLVLDEADRMFDLG--FEPQVRSIVGQIR---PDRQTLLFSATMPRKVEKLA 427
Query: 266 VEMLHIPRCVKFVSTVNRPN-----LFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIV 320
E+L P V V V N + ++ S +++++ E I + +V
Sbjct: 428 REILSDPIRVT-VGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQG-----DTLV 481
Query: 321 YCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGIN 380
+ + +++ +L +RG H D D ++R + ++ + V++ T G++
Sbjct: 482 FASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLD 541
Query: 381 KPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
++ V++ ++K M+ + GR GR G
Sbjct: 542 IKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 571
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
IV+C S ++ LR G++ HA M AR K R+ N ++V T G
Sbjct: 479 IVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARG 538
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSM 430
++ P VR V+H+ L S E Y SGR R + P + + +S+
Sbjct: 539 LDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFASL 590
>Medtr6g007530.1 | DNA helicase, putative | LC |
chr6:1634549-1633372 | 20130731
Length = 171
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 279 STVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKE-SGIVYCFSRKECEQVAKELRE 337
++VNRPN++Y V+ K + D + + E I+YC ++ C+ + L
Sbjct: 72 ASVNRPNIYYEVRYKDRLE----DRFTDVYDTLFSMGEVCAIIYCPTQSMCDNLTAYLSH 127
Query: 338 RGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTV 373
RGIS YHA M+ R V +W ++ +V VGTV
Sbjct: 128 RGISCAAYHAGMNSEDRTSVLHKWISSIPKVAVGTV 163
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 74/361 (20%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCY----------QLPAVLRDG-IALVVSPLISLI 144
Q + + ++SGRD + + G GK+L + Q P V+ DG I L+++P L+
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELV 589
Query: 145 QD---------QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
Q +VMG+ +P + + + E L++G +I+ TP ++
Sbjct: 590 QQIHSDIRKFTKVMGIRC--VPVYGGSGVAQQISE------LKRG---TEIVVCTPGRMI 638
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
+ K + R++ + +DEA G F P I++ P+ V +A
Sbjct: 639 DI--LCTSSGKITNLRRVTYLVMDEADRMFDMG--FEPQITR--IVQNIRPDRQTVLFSA 692
Query: 256 TATQRVQNDLVEMLHIPRCVKFVS--TVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYP 313
T PR V+ ++ +N+P + V +S V K +IA+ ++
Sbjct: 693 T--------------FPRQVEILARKVLNKP-VEIQVGGRSVVNK----DIAQLVEVRPE 733
Query: 314 NK-------------ESG--IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVH 358
N+ E G +V+ S+ +C+ + K+L + G H D RE
Sbjct: 734 NERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTI 793
Query: 359 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
+ +N ++V T G++ ++ VI+ + E Y GR GR G C +
Sbjct: 794 SDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG-CAIT 852
Query: 419 F 419
F
Sbjct: 853 F 853
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 314 NKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTV 373
N ++ IV+ ++K + +AK L + G H + RE + + V+V T
Sbjct: 548 NDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATD 607
Query: 374 AFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFY 433
G GI+ PDV VI++ + ++E Y GR GR G + Q + VFY
Sbjct: 608 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-----LQDTDVFY 662
Query: 434 E 434
E
Sbjct: 663 E 663
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
IV+ ++++ ++++ + + I + H D+ RE+ + N V+V T G
Sbjct: 329 IVFTQTKRDADRISHGM-SKSIPCEALHGDISQIQRERTLAGFRNGHFNVLVATDVASRG 387
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
++ P+V VIH+ L + E + SGR GR G +L +
Sbjct: 388 LDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVY 428
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 147/364 (40%), Gaps = 40/364 (10%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 66 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQI 124
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + G TP ++ R S
Sbjct: 125 EKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVG-------TPGRVFDMLRRQS 177
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL-----GILKVQFPNVPMVALTATA 257
+C + + +DEA G F+ ++ G ++V + M
Sbjct: 178 LRSEC-----IKMFVLDEADEMLSRG--FKDQIYDIFQQLPGKIQVGVFSATMPPEALEI 230
Query: 258 TQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKES 317
T++ N V +L + T+ FY+ +K + ++ E + +
Sbjct: 231 TRKFMNKPVRIL----VKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT-----Q 281
Query: 318 GIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGM 377
+++ +R++ + + ++R R + H DMD N R+ + + + +V++ T
Sbjct: 282 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 341
Query: 378 GINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENSG 437
GI+ V VI++ L E Y GR+GR G + + DA + + + N
Sbjct: 342 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARMLADIQKFYNVT 401
Query: 438 LQNL 441
++ L
Sbjct: 402 IEEL 405
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 135/342 (39%), Gaps = 37/342 (10%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALG 155
Q + + A L G+++LV+ G GKS + +P + R S + + D L +
Sbjct: 166 QMQAIPAALVGKNMLVLADTGSGKSASFLIPIISR-----CASHRLMYVSDNKKPLAMVL 220
Query: 156 IPAHKLTSTTSKEDEKFIYKALE-------KGEGELKILYVTPEKI----SKSKRFMSKI 204
P +L S +E K + K L G+ + LY + + R + +
Sbjct: 221 TPTREL-SIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLL 279
Query: 205 EKCH-HAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMV-ALTATATQRVQ 262
K ++ +DE C Q G FR + + P V M A T+ + +++
Sbjct: 280 TKNEIDLDDVTTFVVDEVDCMLQRG--FRDQVLQI-FTALSQPQVLMYSATTSDSLEKMA 336
Query: 263 NDLVEMLHIPRCVKFVSTVNRPN-----LFYMVKEKSSVGKVVIDEIAEFIQESYPNKES 317
N + + V V NRPN L V+ K K+ + ++ K
Sbjct: 337 NSMAK----DTVVITVGEPNRPNKAVKQLAIWVESKQKKQKLF-----DILKSQKHFKPP 387
Query: 318 GIVYCFSRKECEQVAKELR-ERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFG 376
++Y SR + +A + G+ A H + + R ++ + + V+V T G
Sbjct: 388 VVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGEFPVVVATGVLG 447
Query: 377 MGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLY 418
G++ VR VI + S+ Y + GRA R G + +++
Sbjct: 448 RGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVF 489
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
+++ +R++ + + ++R R + H DMD N R+ + + + +V++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
I+ V VI++ L E Y GR+GR G
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFG 374
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 36/331 (10%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL + ALV++P L Q
Sbjct: 66 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQI 124
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + ++ TP ++ R
Sbjct: 125 EKVMRALGDYLGVKVHACVGGTSVREDQRILSTGVH-------VVVGTPGRVFDMLR--- 174
Query: 203 KIEKCHHAGRLSLISIDEA-HCCSQWGHDFRPDYKNL--GILKVQFPNVPMVALTATATQ 259
+ H + + +DEA S+ D D L G ++V + M T+
Sbjct: 175 --RQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITR 232
Query: 260 RVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGI 319
+ N V +L + R + + + FY+ EK + +D + + + E+ +S +
Sbjct: 233 KFMNKPVRIL-VKRDELTLEGIKQ---FYVNVEKE---EWKLDTLCD-LYETLAITQS-V 283
Query: 320 VYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGI 379
++ +R++ + + ++R R + H DMD N R+ + + + +V++ T GI
Sbjct: 284 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 343
Query: 380 NKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ V VI+ L E Y GR+GR G
Sbjct: 344 DVQQVSLVINFDLPTQPENYLHRIGRSGRFG 374
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 36/331 (10%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL + ALV++P L Q
Sbjct: 83 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQI 141
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + ++ TP ++ R
Sbjct: 142 EKVMRALGDYLGVKVHACVGGTSVREDQRILSTGVH-------VVVGTPGRVFDMLR--- 191
Query: 203 KIEKCHHAGRLSLISIDEA-HCCSQWGHDFRPDYKNL--GILKVQFPNVPMVALTATATQ 259
+ H + + +DEA S+ D D L G ++V + M T+
Sbjct: 192 --RQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITR 249
Query: 260 RVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGI 319
+ N V +L + R + + + FY+ EK + +D + + + E+ +S +
Sbjct: 250 KFMNKPVRIL-VKRDELTLEGIKQ---FYVNVEKE---EWKLDTLCD-LYETLAITQS-V 300
Query: 320 VYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGI 379
++ +R++ + + ++R R + H DMD N R+ + + + +V++ T GI
Sbjct: 301 IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 360
Query: 380 NKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ V VI+ L E Y GR+GR G
Sbjct: 361 DVQQVSLVINFDLPTQPENYLHRIGRSGRFG 391