Miyakogusa Predicted Gene

Lj2g3v1549620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1549620.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2 SV=1,98.83,0,ATP-DEPENDENT
CLP PROTEASE PROTEOLYTIC SUBUNIT,NULL; ATP-DEPENDENT CLP PROTEASE
PROTEOLYTIC SUBUNIT,,CUFF.37398.1
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g026840.1 | ATP-dependent Clp protease proteolytic protein...   210   6e-55
Medtr7g082980.1 | ATP-dependent Clp protease proteolytic protein...   114   6e-26
Medtr7g109610.1 | ATP-dependent Clp protease proteolytic protein...    83   1e-16
Medtr1g086940.1 | ATP-dependent Clp protease proteolytic protein...    83   1e-16
Medtr4g075100.1 | ATP-dependent Clp protease proteolytic protein...    79   3e-15
Medtr4g069800.3 | ATP-dependent Clp protease proteolytic protein...    77   1e-14
Medtr4g069800.1 | ATP-dependent Clp protease proteolytic protein...    76   2e-14
Medtr4g102000.1 | ATP-dependent Clp protease proteolytic protein...    70   1e-12
Medtr4g034690.1 | ATP-dependent Clp protease proteolytic protein...    69   1e-12
Medtr4g069800.2 | ATP-dependent Clp protease proteolytic protein...    66   1e-11
Medtr0002s0730.1 | ATP-dependent Clp protease proteolytic protei...    65   3e-11
Medtr4g099360.1 | ATP-dependent Clp protease proteolytic protein...    52   3e-07
Medtr1g106550.1 | ATP-dependent Clp protease proteolytic protein...    50   1e-06

>Medtr5g026840.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr5:11082961-11087797 | 20130731
          Length = 297

 Score =  210 bits (534), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 105/126 (83%), Positives = 114/126 (90%), Gaps = 1/126 (0%)

Query: 46  RTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMGLLLRERI 105
           RTTP+ C+LT +P+ SKN NF P+  KP ITFQ+SSPQTP  AIRGAE+D MGLLLRERI
Sbjct: 40  RTTPINCVLT-TPSPSKNPNFNPQLQKPSITFQLSSPQTPERAIRGAESDTMGLLLRERI 98

Query: 106 VFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVS 165
           VFLGS IDDFVADAIMSQLLLLDAQDP+KDIKLFINSPGGSLSATMAIYDAVQLVRADVS
Sbjct: 99  VFLGSEIDDFVADAIMSQLLLLDAQDPTKDIKLFINSPGGSLSATMAIYDAVQLVRADVS 158

Query: 166 TIALGI 171
           TIA+GI
Sbjct: 159 TIAMGI 164


>Medtr7g082980.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr7:31837077-31843069 | 20130731
          Length = 297

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 4/97 (4%)

Query: 75  ITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSK 134
           ++ + +SP  P    +  E D   +LLR+RIVFLGS +DD  AD ++SQLL LDA DP+K
Sbjct: 63  LSAKTASPWLP----KFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDPTK 118

Query: 135 DIKLFINSPGGSLSATMAIYDAVQLVRADVSTIALGI 171
           DIKLFINSPGGS++A M +YDA++L +ADVST+ LG+
Sbjct: 119 DIKLFINSPGGSVTAGMGVYDAMKLCKADVSTVCLGL 155


>Medtr7g109610.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr7:44857617-44853379 | 20130731
          Length = 301

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 61/89 (68%)

Query: 83  QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINS 142
           Q P   ++      +  L + RI+  G  +DD +A+ I+SQLL LDA DPSKDI +++NS
Sbjct: 96  QGPPPMVQERFQSVISQLFQYRIIRCGGPVDDDMANIIVSQLLYLDAVDPSKDIVMYVNS 155

Query: 143 PGGSLSATMAIYDAVQLVRADVSTIALGI 171
           PGGS++A MAI+D ++ +R DVST+ +G+
Sbjct: 156 PGGSVTAGMAIFDTMRHIRPDVSTVCVGL 184


>Medtr1g086940.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr1:38915594-38921560 | 20130731
          Length = 304

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 61/89 (68%)

Query: 83  QTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINS 142
           Q P   ++      +  L + RI+  G  +DD +A+ I+SQLL LDA DP+KDI +++NS
Sbjct: 99  QGPPPMVQERFQSVISQLFQYRIIRCGGAVDDDMANIIVSQLLYLDAVDPNKDIVMYVNS 158

Query: 143 PGGSLSATMAIYDAVQLVRADVSTIALGI 171
           PGGS++A MAI+D ++ +R DVST+ +G+
Sbjct: 159 PGGSVTAGMAIFDTMKHIRPDVSTVCVGL 187


>Medtr4g075100.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:28664404-28660842 | 20130731
          Length = 238

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 1/90 (1%)

Query: 82  PQTPATAIRGAET-DAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFI 140
           P    T+ RG    D    LL+ERIV +   I D  A  +++QLL L++++PSK I +++
Sbjct: 31  PMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPINMYL 90

Query: 141 NSPGGSLSATMAIYDAVQLVRADVSTIALG 170
           NSPGG+++A +AIYD +Q +R+ ++TI LG
Sbjct: 91  NSPGGAVTAGLAIYDTMQYIRSPINTICLG 120


>Medtr4g069800.3 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:26245605-26248939 | 20130731
          Length = 237

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 52/90 (57%)

Query: 82  PQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFIN 141
           P TPA    G   D   +L R RI+F+G  ++  VA  ++SQL+ L   DP  DI ++IN
Sbjct: 86  PITPAIMTPGGALDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDPDADILMYIN 145

Query: 142 SPGGSLSATMAIYDAVQLVRADVSTIALGI 171
            PGGS  + +AIYD +  ++  V T+  G+
Sbjct: 146 CPGGSTYSVLAIYDCMSWIKPKVGTVCFGV 175


>Medtr4g069800.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:26245523-26250401 | 20130731
          Length = 274

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 52/90 (57%)

Query: 82  PQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFIN 141
           P TPA    G   D   +L R RI+F+G  ++  VA  ++SQL+ L   DP  DI ++IN
Sbjct: 86  PITPAIMTPGGALDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDPDADILMYIN 145

Query: 142 SPGGSLSATMAIYDAVQLVRADVSTIALGI 171
            PGGS  + +AIYD +  ++  V T+  G+
Sbjct: 146 CPGGSTYSVLAIYDCMSWIKPKVGTVCFGV 175


>Medtr4g102000.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:42213779-42209674 | 20130731
          Length = 320

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 7/117 (5%)

Query: 61  SKNANFEPESLKP-RITFQMSSPQTPATAIR------GAETDAMGLLLRERIVFLGSGID 113
           +K  NF   + KP R   +M    TP    R          D    L RER++F+G  ID
Sbjct: 89  NKVLNFRYANQKPVRAQIRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQEID 148

Query: 114 DFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIALG 170
           + +++ I++ LL LD+ D SK + L+IN PGG L+  M++YD +Q ++  + T  +G
Sbjct: 149 EELSNQILATLLYLDSVDNSKKLYLYINGPGGDLTPCMSLYDTMQSLQTPICTHCIG 205


>Medtr4g034690.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:18333696-18332187 | 20130731
          Length = 195

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 60/99 (60%), Gaps = 6/99 (6%)

Query: 73  PRITFQMSSPQTPATAIRGAETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDP 132
           P++ FQ+            +  D    L +ER++FLG  ++  +++ ++  ++ L  +D 
Sbjct: 6   PKVPFQLPEED------EASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSLEDK 59

Query: 133 SKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIALGI 171
           ++D+ LFINSPGG + + MAI+D +Q+V A+V T+ +G+
Sbjct: 60  TRDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGL 98


>Medtr4g069800.2 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:26245605-26250350 | 20130731
          Length = 242

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 44/70 (62%)

Query: 102 RERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVR 161
           R RI+F+G  ++  VA  ++SQL+ L   DP  DI ++IN PGGS  + +AIYD +  ++
Sbjct: 74  RNRIIFIGQPVNSQVAQRVISQLVTLATIDPDADILMYINCPGGSTYSVLAIYDCMSWIK 133

Query: 162 ADVSTIALGI 171
             V T+  G+
Sbjct: 134 PKVGTVCFGV 143


>Medtr0002s0730.1 | ATP-dependent Clp protease proteolytic protein |
           HC | scaffold0002:268560-267910 | 20130731
          Length = 216

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 46/78 (58%)

Query: 94  TDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAI 153
            D   ++ RER +FLG  I   + + I   ++ L  +D   DI LFINSPGG L + MAI
Sbjct: 21  VDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAI 80

Query: 154 YDAVQLVRADVSTIALGI 171
           +D +Q V  D+ TI LGI
Sbjct: 81  FDTMQTVTPDIYTICLGI 98


>Medtr4g099360.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr4:41221585-41229590 | 20130731
          Length = 304

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 19/135 (14%)

Query: 54  LTASPNHSKNANFEPESLKPRITFQMSS----------PQTPATAIRGAETDAMGLLLRE 103
           +T+S +H       P  L P  TFQ S           P +  TA      D    L + 
Sbjct: 54  ITSSTSHFSGHKLRPPCLNP-ATFQSSGSKRGVVTMVIPFSRGTAWEQPPPDLASYLYKN 112

Query: 104 RIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG--------GSLSATMAIYD 155
           RIV+LG  +   V + ++++ L L   D +K I ++INS G        G  +  +A+YD
Sbjct: 113 RIVYLGMSLVPSVTELMVAEFLYLQYDDETKPIYMYINSTGTTKGGEKLGYETEALAVYD 172

Query: 156 AVQLVRADVSTIALG 170
            ++ ++  + T+ +G
Sbjct: 173 LMRYIKPPIFTLCVG 187


>Medtr1g106550.1 | ATP-dependent Clp protease proteolytic protein |
           HC | chr1:48173405-48168670 | 20130731
          Length = 373

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 92  AETDAMGLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPG------- 144
           A  D   LLL  RI +LG  I   V + I++QL+ LD  +P+K + ++INS G       
Sbjct: 152 APPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNE 211

Query: 145 --GSLSATMAIYDAVQLVRADVSTIALGI 171
             GS +   +I D +  +++DV T+ L +
Sbjct: 212 TVGSETDAYSIADMISHIKSDVYTVNLAM 240