Miyakogusa Predicted Gene

Lj2g3v1549600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1549600.1 tr|A9XMT3|A9XMT3_LOTJA CYCLOPS OS=Lotus japonicus
PE=2 SV=1,99.61,0,seg,NULL; coiled-coil,NULL,CUFF.37396.1
         (518 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g026850.1 | cyclops protein, putative | HC | chr5:11093409...   721   0.0  
Medtr5g026850.2 | cyclops protein, putative | HC | chr5:11093409...   717   0.0  

>Medtr5g026850.1 | cyclops protein, putative | HC |
           chr5:11093409-11098145 | 20130731
          Length = 513

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/500 (72%), Positives = 407/500 (81%), Gaps = 7/500 (1%)

Query: 1   MEGRGFSGLYRNSSEELFLKTVMESPIGMPVPSMEMLGFKNVSQGFRADSEELFKRWLTN 60
           MEGRGFSGLY+NSSEELFLKTVMESPIGMPVP+MEMLGFK VSQ FR DSEELFKRWLTN
Sbjct: 1   MEGRGFSGLYKNSSEELFLKTVMESPIGMPVPTMEMLGFKTVSQSFRTDSEELFKRWLTN 60

Query: 61  G-EGYNSSSIGFSSRLSKRISTELVNGSNQLQVGVASDGRNNDKPFIQNNLLANDVSGDF 119
             EGYNSSS+G +SRLSKRISTE+ N SNQ  +GVAS+GRNNDK  +QNN LANDVS DF
Sbjct: 61  DQEGYNSSSMGLNSRLSKRISTEIANMSNQQHIGVASEGRNNDKSCLQNNFLANDVSSDF 120

Query: 120 NFPIRDPVDRELQPSNLFLAKAWFLSDQXXXXXXXXXXXXXXXEMQNGLATQGIESICMD 179
           NFPIRDPVDRELQ SNLFLAKAWF++DQ               EMQN  A QG++S+ M 
Sbjct: 121 NFPIRDPVDRELQSSNLFLAKAWFITDQRMTRSRSSELRRRYTEMQNSQAPQGLDSMFMV 180

Query: 180 PQHGAEATKQEVANFNGYNYLSMCELPSQKGXXXXXXXXXXXXXXTPQFGDMDKVSSCVS 239
           P+H     K+E+ANFNG++YLSMCELPSQKG              T Q  D+DKVSSCVS
Sbjct: 181 PEHDTNTIKEELANFNGFDYLSMCELPSQKGTFMSPSNSSSSTFNTHQLVDVDKVSSCVS 240

Query: 240 MLKGTLQRRRLSSQLEKEAAEDDLNGIFYPQEPLFQTGFDQGQENWSNQTPVNVQVDSIG 299
           MLKGTLQR++L  Q+EKEAAED LN IF  +EPLFQ+ F++ +E+W+ Q  VNVQ D   
Sbjct: 241 MLKGTLQRKKLECQVEKEAAEDGLNEIFCIREPLFQSAFNE-EESWNQQKLVNVQGDFTD 299

Query: 300 EVKDHGVLQTLEGSTNPVVDGFANQINQIYVGTASGEPSQSESSNAAPVISSGLDTCEGP 359
           +V D GV+QTLEG+TN V+DGFANQ NQI   TASGEPSQSESS AAPVISSGLD CEGP
Sbjct: 300 QVNDPGVMQTLEGTTNFVLDGFANQTNQIQGRTASGEPSQSESSAAAPVISSGLDACEGP 359

Query: 360 INSNQTLCESSWKQVGVSKSSENTQNRVKGFREQIMDNLKDDKKRKSLERYGSITSAVSD 419
            NSNQTL +SSWKQVG     E+TQN+V+G REQIMDNLKDD+KRKSLERYGS+TSAVSD
Sbjct: 360 SNSNQTLGDSSWKQVG-----ESTQNKVRGVREQIMDNLKDDRKRKSLERYGSVTSAVSD 414

Query: 420 DKGDTTKKRRVERSRKMAEAKERNSTPSVPSDMQAVLKRCENLEKEVRSLKLNLSFMNRK 479
            K D TKKRRVERSRKMAEAKERN TP++PSDMQA+LKRCENLEKEVRSLKLNLSFMNRK
Sbjct: 415 GKMDNTKKRRVERSRKMAEAKERNLTPTIPSDMQAILKRCENLEKEVRSLKLNLSFMNRK 474

Query: 480 DSEQTKQIEDLQKQNEELAD 499
           DSEQTKQIEDLQKQNE+LAD
Sbjct: 475 DSEQTKQIEDLQKQNEDLAD 494


>Medtr5g026850.2 | cyclops protein, putative | HC |
           chr5:11093409-11098145 | 20130731
          Length = 519

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/506 (71%), Positives = 407/506 (80%), Gaps = 13/506 (2%)

Query: 1   MEGRGFSGLYRNSSEELFLKTVMESPIGMPVPSMEMLGFKNVSQGFRADSEELFKRWLTN 60
           MEGRGFSGLY+NSSEELFLKTVMESPIGMPVP+MEMLGFK VSQ FR DSEELFKRWLTN
Sbjct: 1   MEGRGFSGLYKNSSEELFLKTVMESPIGMPVPTMEMLGFKTVSQSFRTDSEELFKRWLTN 60

Query: 61  G-EGYNSSSIGFSSRLSKRISTELVNGSNQLQVGVASDGRNNDKPFIQNNLLANDVSGDF 119
             EGYNSSS+G +SRLSKRISTE+ N SNQ  +GVAS+GRNNDK  +QNN LANDVS DF
Sbjct: 61  DQEGYNSSSMGLNSRLSKRISTEIANMSNQQHIGVASEGRNNDKSCLQNNFLANDVSSDF 120

Query: 120 NFPIRDPVDRELQPSNLFLAKAWFLSDQXXXXXXXX------XXXXXXXEMQNGLATQGI 173
           NFPIRDPVDRELQ SNLFLAKAWF++DQ                     EMQN  A QG+
Sbjct: 121 NFPIRDPVDRELQSSNLFLAKAWFITDQRMTRSRSSELRYHYHTLRRYTEMQNSQAPQGL 180

Query: 174 ESICMDPQHGAEATKQEVANFNGYNYLSMCELPSQKGXXXXXXXXXXXXXXTPQFGDMDK 233
           +S+ M P+H     K+E+ANFNG++YLSMCELPSQKG              T Q  D+DK
Sbjct: 181 DSMFMVPEHDTNTIKEELANFNGFDYLSMCELPSQKGTFMSPSNSSSSTFNTHQLVDVDK 240

Query: 234 VSSCVSMLKGTLQRRRLSSQLEKEAAEDDLNGIFYPQEPLFQTGFDQGQENWSNQTPVNV 293
           VSSCVSMLKGTLQR++L  Q+EKEAAED LN IF  +EPLFQ+ F++ +E+W+ Q  VNV
Sbjct: 241 VSSCVSMLKGTLQRKKLECQVEKEAAEDGLNEIFCIREPLFQSAFNE-EESWNQQKLVNV 299

Query: 294 QVDSIGEVKDHGVLQTLEGSTNPVVDGFANQINQIYVGTASGEPSQSESSNAAPVISSGL 353
           Q D   +V D GV+QTLEG+TN V+DGFANQ NQI   TASGEPSQSESS AAPVISSGL
Sbjct: 300 QGDFTDQVNDPGVMQTLEGTTNFVLDGFANQTNQIQGRTASGEPSQSESSAAAPVISSGL 359

Query: 354 DTCEGPINSNQTLCESSWKQVGVSKSSENTQNRVKGFREQIMDNLKDDKKRKSLERYGSI 413
           D CEGP NSNQTL +SSWKQVG     E+TQN+V+G REQIMDNLKDD+KRKSLERYGS+
Sbjct: 360 DACEGPSNSNQTLGDSSWKQVG-----ESTQNKVRGVREQIMDNLKDDRKRKSLERYGSV 414

Query: 414 TSAVSDDKGDTTKKRRVERSRKMAEAKERNSTPSVPSDMQAVLKRCENLEKEVRSLKLNL 473
           TSAVSD K D TKKRRVERSRKMAEAKERN TP++PSDMQA+LKRCENLEKEVRSLKLNL
Sbjct: 415 TSAVSDGKMDNTKKRRVERSRKMAEAKERNLTPTIPSDMQAILKRCENLEKEVRSLKLNL 474

Query: 474 SFMNRKDSEQTKQIEDLQKQNEELAD 499
           SFMNRKDSEQTKQIEDLQKQNE+LAD
Sbjct: 475 SFMNRKDSEQTKQIEDLQKQNEDLAD 500