Miyakogusa Predicted Gene

Lj2g3v1548420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1548420.1 tr|J0ZIW0|J0ZIW0_9RHIZ 3-demethylubiquinone-9
3-methyltransferase OS=Bartonella melophagi K-2C
GN=ub,49.35,2e-19,SUBFAMILY NOT NAMED,NULL;
HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE,Ubiquinone biosynthesis
O-me,CUFF.37358.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091910.1 | 3-demethylubiquinone-9 3-methyltransferase | H...   155   9e-39

>Medtr5g091910.1 | 3-demethylubiquinone-9 3-methyltransferase | HC |
           chr5:40110525-40115950 | 20130731
          Length = 303

 Score =  155 bits (391), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 84/127 (66%), Positives = 89/127 (70%), Gaps = 24/127 (18%)

Query: 1   MNHLRNLNS--------ITNRC--ILLNARRF-------SYAAKEH-------SSLNRNE 36
           MNHLRNLN+        + NR   +  N  +F             H       SSLNRNE
Sbjct: 4   MNHLRNLNNGITIHHHILRNRFHPLFFNYPKFFSDSSLPQQPTTPHVQQPPPPSSLNRNE 63

Query: 37  LAKFAAIAETWWDSEGPFKPLHVMNPTRLAFIRSVLCRHFKKDPCSAKPLEGLKIVDVGC 96
           LAKFAAIAETWWDSEGPFKPLHVMNPTRLAF+RS LCRHFKKDP SAKPLEGLKIVDVGC
Sbjct: 64  LAKFAAIAETWWDSEGPFKPLHVMNPTRLAFVRSALCRHFKKDPYSAKPLEGLKIVDVGC 123

Query: 97  GGGILSE 103
           GGGILSE
Sbjct: 124 GGGILSE 130