Miyakogusa Predicted Gene

Lj2g3v1537380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1537380.1 Non Characterized Hit- tr|G7K6W0|G7K6W0_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,70.48,0,FAMILY
NOT NAMED,NULL; WRC,WRC; QLQ,Glutamine-Leucine-Glutamine, QLQ;
seg,NULL; ALDEHYDE_DEHYDR_CYS,,CUFF.37356.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g027030.1 | growth-regulating factor | HC | chr5:11196291-...   411   e-115
Medtr0001s0490.1 | growth-regulating factor | HC | scaffold0001:...   158   7e-39
Medtr2g041430.1 | growth-regulating factor-like protein | HC | c...   143   2e-34
Medtr2g041430.3 | growth-regulating factor-like protein | HC | c...   143   2e-34
Medtr2g041430.2 | growth-regulating factor-like protein | HC | c...   143   2e-34
Medtr4g125490.1 | growth-regulating factor-like protein | HC | c...   143   3e-34
Medtr8g020560.1 | growth-regulating factor-like protein | HC | c...   139   3e-33
Medtr1g017490.1 | growth-regulating factor | HC | chr1:4900623-4...   132   5e-31
Medtr1g017490.2 | growth-regulating factor | HC | chr1:4901660-4...   131   9e-31
Medtr7g104050.1 | growth-regulating factor | HC | chr7:42091020-...   129   3e-30
Medtr7g104050.2 | growth-regulating factor | HC | chr7:42091020-...   129   5e-30
Medtr3g092330.1 | growth-regulating factor | HC | chr3:42182837-...   104   2e-22
Medtr8g035910.1 | growth-regulating factor 4 | HC | chr8:1313896...    85   9e-17
Medtr8g035640.1 | growth-regulating factor 4 | LC | chr8:1301039...    55   1e-07

>Medtr5g027030.1 | growth-regulating factor | HC |
           chr5:11196291-11199598 | 20130731
          Length = 324

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/316 (68%), Positives = 234/316 (74%), Gaps = 22/316 (6%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMSHPHSSLGYYGKKIDPEPGR 92
           FTVSQWQELEHQALIFKYLKAGLSVPPDLL+PIRKSLQ MSHP  SLGYYGKKIDPEPGR
Sbjct: 17  FTVSQWQELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMSHP--SLGYYGKKIDPEPGR 74

Query: 93  CRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVEXXXXXXXXXXXXXXXXXXXXXX 152
           CRRTDGKKWRCA+DAHPDSKYCDRHMIRRRYRSRKPVE                      
Sbjct: 75  CRRTDGKKWRCARDAHPDSKYCDRHMIRRRYRSRKPVESSSSSSCSQSSSSVSATTSQGG 134

Query: 153 XXXXXX-----XXXVTTFQNNLPLHTNGAREGFSFTLGNSTSQLHMDT-------SKKPY 200
                          +TFQ  LPLHTNG REG SF LGN+    HMD        SKKPY
Sbjct: 135 SSGSTSTVSASVTATSTFQT-LPLHTNGTREGLSFNLGNTVP--HMDPMLLPLQGSKKPY 191

Query: 201 RFELTNEAEEHSLLQKDLGSVKYQGYDFTSDGMW-SHMHQIPSNTISESRSGSAIVGNC- 258
           RF L +EAEE++LLQKDLGSVKYQGYDFTSDGMW ++M QI SNT+SESR+GS++V N  
Sbjct: 192 RFGLNSEAEENNLLQKDLGSVKYQGYDFTSDGMWYNNMSQISSNTVSESRNGSSMVDNYN 251

Query: 259 FQQRTTRDAELLNLDTARSKELAFSGQVCSAGRLKQEYQSPQSLFSDWHWKKDLGSSATA 318
           FQQRTTR+ EL NLD ARSKE+ F+GQ+   G LKQEY S QSLFSDW WKKDL SS   
Sbjct: 252 FQQRTTREPELFNLDAARSKEIVFNGQL---GSLKQEYPSSQSLFSDWQWKKDLASSGVE 308

Query: 319 YRPNKDFNCNPDINAD 334
           YRP+KDFN NPD+N D
Sbjct: 309 YRPSKDFNTNPDVNVD 324


>Medtr0001s0490.1 | growth-regulating factor | HC |
           scaffold0001:397821-401891 | 20130731
          Length = 337

 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 84/107 (78%), Gaps = 9/107 (8%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMS------HPHSSLGY---YG 83
           FTVSQWQELEHQALIFKY+ AGL VPPDL+ PI  S   +S      HP  +L Y   YG
Sbjct: 26  FTVSQWQELEHQALIFKYMVAGLPVPPDLVHPIHSSFHSLSSNNFFHHPIPTLSYCSFYG 85

Query: 84  KKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           KK+DPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R R RSRKPVE
Sbjct: 86  KKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 132


>Medtr2g041430.1 | growth-regulating factor-like protein | HC |
           chr2:18200260-18198399 | 20130731
          Length = 357

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 14/112 (12%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQ--------LMSHPHSSLGY--- 81
           FT SQWQELEHQALI+KY+ +G+S+PPDLL  IRKS            S  H   G+   
Sbjct: 8   FTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLFPSQQHQHFGWNYL 67

Query: 82  ---YGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
               G+KIDPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R + RSRKPVE
Sbjct: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119


>Medtr2g041430.3 | growth-regulating factor-like protein | HC |
           chr2:18200318-18197862 | 20130731
          Length = 356

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 14/112 (12%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQ--------LMSHPHSSLGY--- 81
           FT SQWQELEHQALI+KY+ +G+S+PPDLL  IRKS            S  H   G+   
Sbjct: 8   FTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLFPSQQHQHFGWNYL 67

Query: 82  ---YGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
               G+KIDPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R + RSRKPVE
Sbjct: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119


>Medtr2g041430.2 | growth-regulating factor-like protein | HC |
           chr2:18200318-18197862 | 20130731
          Length = 356

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 14/112 (12%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQ--------LMSHPHSSLGY--- 81
           FT SQWQELEHQALI+KY+ +G+S+PPDLL  IRKS            S  H   G+   
Sbjct: 8   FTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLFPSQQHQHFGWNYL 67

Query: 82  ---YGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
               G+KIDPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R + RSRKPVE
Sbjct: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119


>Medtr4g125490.1 | growth-regulating factor-like protein | HC |
           chr4:52051634-52053330 | 20130731
          Length = 430

 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 83/108 (76%), Gaps = 10/108 (9%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSL----QLMSHPHSSLGY------Y 82
           FT +QWQELEHQALI+KY+ +G+S+PPDLL+ I++S     +L  H     G+       
Sbjct: 10  FTPTQWQELEHQALIYKYMASGISIPPDLLLTIKRSYLDSSRLSPHQSQHFGWNYLPMGL 69

Query: 83  GKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           G+KIDPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R + RSRKPVE
Sbjct: 70  GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 117


>Medtr8g020560.1 | growth-regulating factor-like protein | HC |
           chr8:7247171-7245246 | 20130731
          Length = 348

 Score =  139 bits (351), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 10/108 (9%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQL----MSHPHSSLGY------Y 82
           FT +QWQELE QAL+FKY+  G  +PPDL+  I++SL         PH  +G+      +
Sbjct: 12  FTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRIFPHPPIGWGCFEMGF 71

Query: 83  GKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           G+K+DPEPGRCRRTDGKKWRC+K+A+PDSKYC+RHM R R RSRKPVE
Sbjct: 72  GRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119


>Medtr1g017490.1 | growth-regulating factor | HC |
           chr1:4900623-4905273 | 20130731
          Length = 653

 Score =  132 bits (332), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 16/113 (14%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQ---------LMSHPHSSLGY-- 81
           FT SQW ELEHQALI+KY+ A ++VP  LL+PIRK+L           +  P++ LG+  
Sbjct: 145 FTPSQWMELEHQALIYKYITANVAVPHHLLIPIRKALDSAGLSSFSTALLRPNA-LGWGG 203

Query: 82  ----YGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
               Y    DPEPGRCRRTDGKKWRC++DA  D KYC+RHM R R+RSRKPVE
Sbjct: 204 FHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVE 256


>Medtr1g017490.2 | growth-regulating factor | HC |
           chr1:4901660-4905097 | 20130731
          Length = 520

 Score =  131 bits (330), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 16/113 (14%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQ---------LMSHPHSSLGY-- 81
           FT SQW ELEHQALI+KY+ A ++VP  LL+PIRK+L           +  P++ LG+  
Sbjct: 12  FTPSQWMELEHQALIYKYITANVAVPHHLLIPIRKALDSAGLSSFSTALLRPNA-LGWGG 70

Query: 82  ----YGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
               Y    DPEPGRCRRTDGKKWRC++DA  D KYC+RHM R R+RSRKPVE
Sbjct: 71  FHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVE 123


>Medtr7g104050.1 | growth-regulating factor | HC |
           chr7:42091020-42093749 | 20130731
          Length = 384

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 12/109 (11%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMSHPH-------SSL---GYY 82
           F++SQWQELE QALIF+Y+  G SVPP+LL PI+KSL L S P+       ++L   GY+
Sbjct: 79  FSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSL-LHSSPYFLHHYQPTALLQSGYW 137

Query: 83  GK-KIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           G+  +DPEPGRCRRTDGKKWRCA+D     KYC+RHM R R RSRKPVE
Sbjct: 138 GRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKPVE 186


>Medtr7g104050.2 | growth-regulating factor | HC |
           chr7:42091020-42093749 | 20130731
          Length = 361

 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 12/109 (11%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMSHPH-------SSL---GYY 82
           F++SQWQELE QALIF+Y+  G SVPP+LL PI+KSL L S P+       ++L   GY+
Sbjct: 79  FSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSL-LHSSPYFLHHYQPTALLQSGYW 137

Query: 83  GK-KIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           G+  +DPEPGRCRRTDGKKWRCA+D     KYC+RHM R R RSRKPVE
Sbjct: 138 GRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKPVE 186


>Medtr3g092330.1 | growth-regulating factor | HC |
           chr3:42182837-42185284 | 20130731
          Length = 540

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 10/99 (10%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLL-VPIRKSLQLMSHPHSSLGYYGKKIDPEPG 91
           FT +QW+ELE QA+I+KYL A L VP  LL +    +L+L +             DPE G
Sbjct: 114 FTSAQWRELERQAMIYKYLMASLPVPSHLLSLDGGFNLRLSNR---------NNTDPEAG 164

Query: 92  RCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           RC+RTDGKKWRC+KD   +++YC+RHM R R RSRKPVE
Sbjct: 165 RCKRTDGKKWRCSKDVALNNRYCERHMHRGRPRSRKPVE 203


>Medtr8g035910.1 | growth-regulating factor 4 | HC |
           chr8:13138965-13135899 | 20130731
          Length = 428

 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 33  FTVSQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMSHPHSSLGYYGKKIDPEPGR 92
            T +Q +EL+HQ  IF +    L +P  LL    +    MS        Y   +D EP R
Sbjct: 50  ITEAQRRELDHQVFIFNHFAYNLPLPYYLL----QFPSNMSEYSRRGSDYVTMVDQEPHR 105

Query: 93  CRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVE 130
           CRRTDGKKWRC KD  P+ KYC+RHM R R RSRK VE
Sbjct: 106 CRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVE 143



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 86  IDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIR---RRY 123
           ++PEPGRCRRTDGKKWRC     P  KYC  HM R   RR+
Sbjct: 297 LEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRF 337


>Medtr8g035640.1 | growth-regulating factor 4 | LC |
           chr8:13010394-13010900 | 20130731
          Length = 168

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 86  IDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIR---RRYRSRK 127
           ++PEPGRCRRTDGKKWRC     P  KYC   M R   RR+ + K
Sbjct: 51  LEPEPGRCRRTDGKKWRCKSAVLPGQKYCATLMHRGAKRRFTNLK 95