Miyakogusa Predicted Gene
- Lj2g3v1536240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1536240.1 Non Characterized Hit- tr|I3SNS8|I3SNS8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.88,0,seg,NULL;
SCAMP,SCAMP; SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN,NULL;
SECRETORY CARRIER-ASSOCIA,CUFF.37347.1
(268 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g027790.1 | secretory carrier-associated membrane protein ... 441 e-124
Medtr2g012560.1 | secretory carrier-associated membrane protein ... 333 7e-92
Medtr2g012560.2 | secretory carrier-associated membrane protein ... 310 1e-84
Medtr4g090510.1 | secretory carrier-associated membrane protein ... 287 8e-78
Medtr4g090510.2 | secretory carrier-associated membrane protein ... 287 8e-78
Medtr4g046110.1 | secretory carrier-associated membrane protein ... 284 7e-77
Medtr2g090115.1 | secretory carrier-associated membrane protein ... 276 2e-74
Medtr4g086230.1 | hypothetical protein | LC | chr4:33754095-3375... 50 3e-06
>Medtr5g027790.1 | secretory carrier-associated membrane protein |
HC | chr5:11600373-11594098 | 20130731
Length = 267
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/269 (80%), Positives = 233/269 (86%), Gaps = 3/269 (1%)
Query: 1 MNRHHDPNPFDEDEVNPFSNGAAPGSKSRIPPLASEPLGFGQRHDATVDIPLDTTN-EPK 59
MNR+HDPNPF+E+EVNPFSNG GSKSR+P +ASEPLGFGQRHDATVDIPL+T+N + K
Sbjct: 1 MNRNHDPNPFEEEEVNPFSNGT--GSKSRVPSVASEPLGFGQRHDATVDIPLETSNGDSK 58
Query: 60 KKGQELAAWEAXXXXXXXXXXXXXXAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHAQR 119
KK QELA WEA +V++AGVPVDDKNWPP FPIIHHDIANEIPVHAQR
Sbjct: 59 KKSQELAVWEADLKRREKDIKRREDSVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQR 118
Query: 120 LQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYR 179
LQY AFASWLGIVLCLVFNVVAV+VCWIRGGGVKIFFLAVIYALLG+PLSYVLWYRPLYR
Sbjct: 119 LQYSAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGIPLSYVLWYRPLYR 178
Query: 180 AMRTDSALKFGWFFMFYLLHXXXXXXXXXXPPVVFHGKSLTGILAATDVFSDHVLVGIFY 239
AMRTDSALKF WFFMFYLLH PPVVFHGKSLTGILAA DVFSDHVLVGIFY
Sbjct: 179 AMRTDSALKFSWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFY 238
Query: 240 LVGFGLFCLESLLSLWVIQKIYLFFRGHK 268
L+GFGLFCLE+LLSLWVIQ+IY+FFRGHK
Sbjct: 239 LIGFGLFCLEALLSLWVIQRIYMFFRGHK 267
>Medtr2g012560.1 | secretory carrier-associated membrane protein |
HC | chr2:3139317-3133784 | 20130731
Length = 289
Score = 333 bits (855), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 160/268 (59%), Positives = 197/268 (73%), Gaps = 2/268 (0%)
Query: 1 MNRHHDPNPFDEDEVNPFSN--GAAPGSKSRIPPLASEPLGFGQRHDATVDIPLDTTNEP 58
M +D NPFDE++VNPFSN G AP + SR PL E G+ TVDIPLD + +
Sbjct: 1 MAGRYDSNPFDEEQVNPFSNSGGVAPATNSRPAPLNPERAGYNYGFGQTVDIPLDASTDV 60
Query: 59 KKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHAQ 118
KKK +EL A EA A+SRAG+ +++KNWPP FPIIHHDIANEIPVH Q
Sbjct: 61 KKKERELQAKEAELRKREQEVRRKEEAISRAGIVIEEKNWPPFFPIIHHDIANEIPVHLQ 120
Query: 119 RLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLY 178
RLQY+AF S LG+VLCL +NVVAV WI+G GVKI+FLA+IY + GVP +YVLWY+PLY
Sbjct: 121 RLQYVAFFSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYKPLY 180
Query: 179 RAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPPVVFHGKSLTGILAATDVFSDHVLVGIF 238
RA RTDSA+KFGWFF+FYLLH PP+VF GKSLTGIL+A DV D+ ++GIF
Sbjct: 181 RAFRTDSAIKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIGDYTIIGIF 240
Query: 239 YLVGFGLFCLESLLSLWVIQKIYLFFRG 266
Y +GFGLFCLE+L+S+WVIQ++Y++FRG
Sbjct: 241 YFIGFGLFCLETLISVWVIQQVYMYFRG 268
>Medtr2g012560.2 | secretory carrier-associated membrane protein |
HC | chr2:3139259-3133784 | 20130731
Length = 280
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/268 (57%), Positives = 189/268 (70%), Gaps = 11/268 (4%)
Query: 1 MNRHHDPNPFDEDEVNPFSN--GAAPGSKSRIPPLASEPLGFGQRHDATVDIPLDTTNEP 58
M +D NPFDE++VNPFSN G AP + SR PL E G+ TVDIPLD + +
Sbjct: 1 MAGRYDSNPFDEEQVNPFSNSGGVAPATNSRPAPLNPERAGYNYGFGQTVDIPLDASTDV 60
Query: 59 KKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHAQ 118
KKK +EL A EA A+SRAG+ +++KNWPP FPIIHHDIANEIPVH Q
Sbjct: 61 KKKERELQAKEAELRKREQEVRRKEEAISRAGIVIEEKNWPPFFPIIHHDIANEIPVHLQ 120
Query: 119 RLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLY 178
RLQY+AF S LG+VLCL +NVVAV WI+G GVKI+FLA+IY + GVP +YVLW
Sbjct: 121 RLQYVAFFSLLGLVLCLTWNVVAVTAAWIKGEGVKIWFLAIIYFIAGVPGAYVLW----- 175
Query: 179 RAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPPVVFHGKSLTGILAATDVFSDHVLVGIF 238
TDSA+KFGWFF+FYLLH PP+VF GKSLTGIL+A DV D+ ++GIF
Sbjct: 176 ----TDSAIKFGWFFLFYLLHLGFCILAAVAPPIVFKGKSLTGILSAIDVIGDYTIIGIF 231
Query: 239 YLVGFGLFCLESLLSLWVIQKIYLFFRG 266
Y +GFGLFCLE+L+S+WVIQ++Y++FRG
Sbjct: 232 YFIGFGLFCLETLISVWVIQQVYMYFRG 259
>Medtr4g090510.1 | secretory carrier-associated membrane protein |
HC | chr4:35885058-35890557 | 20130731
Length = 311
Score = 287 bits (734), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 196/295 (66%), Gaps = 33/295 (11%)
Query: 1 MNRHHDPNPFDEDEVNPFSNGAA------------------------PGSKSRIPPLASE 36
M ++ NPFDE+EVNPFS AA P SR+ PL E
Sbjct: 1 MAGRYESNPFDEEEVNPFSEPAAKGKTSSQSNYSGGAFYTTNPGSVPPAKNSRLSPLEPE 60
Query: 37 P-----LGFGQRHDATVDIPLDTTNEPKKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGV 91
P GFG ATVDIPLDT+ + KK+ +EL + EA A +RAG+
Sbjct: 61 PADYNNYGFG----ATVDIPLDTSTDLKKREKELQSKEADLRRREQEVRRKEEAAARAGI 116
Query: 92 PVDDKNWPPIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGG 151
+++KNWPP FPIIHHDIANEIPVH Q+LQY+AF ++LG+V CL++NV+AV WI+G G
Sbjct: 117 VLEEKNWPPFFPIIHHDIANEIPVHLQKLQYVAFTTYLGLVACLLWNVIAVTAAWIKGEG 176
Query: 152 VKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPP 211
VKI+FLA+IY + GVP +YVLWYRPLYR RT+SALKFGWFFM YL+H PP
Sbjct: 177 VKIWFLAIIYFISGVPGAYVLWYRPLYRVFRTESALKFGWFFMLYLVHIGFCILAAVAPP 236
Query: 212 VVFHGKSLTGILAATDVFSDHVLVGIFYLVGFGLFCLESLLSLWVIQKIYLFFRG 266
+VF GKSLTGIL+A DV + L+GIFY +GFG FCLE+L+S+WVIQ++Y++FRG
Sbjct: 237 IVFKGKSLTGILSAIDVIDNSTLIGIFYFIGFGFFCLETLISIWVIQQVYMYFRG 291
>Medtr4g090510.2 | secretory carrier-associated membrane protein |
HC | chr4:35885058-35890557 | 20130731
Length = 311
Score = 287 bits (734), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 196/295 (66%), Gaps = 33/295 (11%)
Query: 1 MNRHHDPNPFDEDEVNPFSNGAA------------------------PGSKSRIPPLASE 36
M ++ NPFDE+EVNPFS AA P SR+ PL E
Sbjct: 1 MAGRYESNPFDEEEVNPFSEPAAKGKTSSQSNYSGGAFYTTNPGSVPPAKNSRLSPLEPE 60
Query: 37 P-----LGFGQRHDATVDIPLDTTNEPKKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGV 91
P GFG ATVDIPLDT+ + KK+ +EL + EA A +RAG+
Sbjct: 61 PADYNNYGFG----ATVDIPLDTSTDLKKREKELQSKEADLRRREQEVRRKEEAAARAGI 116
Query: 92 PVDDKNWPPIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGG 151
+++KNWPP FPIIHHDIANEIPVH Q+LQY+AF ++LG+V CL++NV+AV WI+G G
Sbjct: 117 VLEEKNWPPFFPIIHHDIANEIPVHLQKLQYVAFTTYLGLVACLLWNVIAVTAAWIKGEG 176
Query: 152 VKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPP 211
VKI+FLA+IY + GVP +YVLWYRPLYR RT+SALKFGWFFM YL+H PP
Sbjct: 177 VKIWFLAIIYFISGVPGAYVLWYRPLYRVFRTESALKFGWFFMLYLVHIGFCILAAVAPP 236
Query: 212 VVFHGKSLTGILAATDVFSDHVLVGIFYLVGFGLFCLESLLSLWVIQKIYLFFRG 266
+VF GKSLTGIL+A DV + L+GIFY +GFG FCLE+L+S+WVIQ++Y++FRG
Sbjct: 237 IVFKGKSLTGILSAIDVIDNSTLIGIFYFIGFGFFCLETLISIWVIQQVYMYFRG 291
>Medtr4g046110.1 | secretory carrier-associated membrane protein |
HC | chr4:16190569-16182063 | 20130731
Length = 306
Score = 284 bits (726), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 196/291 (67%), Gaps = 30/291 (10%)
Query: 1 MNRHHDPNPFDEDE--VNPFSNGAA-----------------------PGSKSRIPPLAS 35
M+R+ DPNPF+E+E VNPF++G A P + SR+ PL
Sbjct: 1 MSRY-DPNPFEEEETHVNPFADGTAKGKGSGQSSYGGGAFYTTNPGSVPSAASRLSPLPH 59
Query: 36 EPLGFGQRHDATVDIPLDTTNEPKKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGVPVDD 95
EP +ATVDIPLD++ + K K +EL A E+ A++RAG+ +++
Sbjct: 60 EPYD----RNATVDIPLDSSKDVKAKEKELQARESELKKREQELKRREDAIARAGIVIEE 115
Query: 96 KNWPPIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIF 155
KNWPP FPIIHHDI EIP+H QR+QY+AF++WLG+VLCL++N+VAV WI+G G I+
Sbjct: 116 KNWPPFFPIIHHDIGTEIPIHLQRMQYIAFSTWLGLVLCLLWNIVAVTTAWIKGEGPTIW 175
Query: 156 FLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPPVVFH 215
FLA+IY + GVP SYV+WYRPLYRAMRTDSALKFGWFF+ Y+LH PP++F
Sbjct: 176 FLAIIYFISGVPASYVMWYRPLYRAMRTDSALKFGWFFVSYMLHIAFCIFAAVAPPIIFK 235
Query: 216 GKSLTGILAATDVFSDHVLVGIFYLVGFGLFCLESLLSLWVIQKIYLFFRG 266
GKSLTGILAA DV LVGIFY +GFG FC+ESL+S+WV Q++ ++FRG
Sbjct: 236 GKSLTGILAAIDVIGGSALVGIFYFIGFGFFCIESLMSVWVFQQVLMYFRG 286
>Medtr2g090115.1 | secretory carrier-associated membrane protein |
HC | chr2:38192932-38187550 | 20130731
Length = 307
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 181/287 (63%), Gaps = 32/287 (11%)
Query: 6 DPNPFDEDEVNPFSNGAAPG------------------------SKSRIPPLASEPLGFG 41
+ NPF E+EVNPF++G+ G + SR+ PL EP
Sbjct: 7 ETNPFAEEEVNPFADGSTKGKASGQSNYGGGAFYTTNPGSVSSVTSSRLTPLPHEP---- 62
Query: 42 QRHD--ATVDIPLDTTNEPKKKGQELAAWEAXXXXXXXXXXXXXXAVSRAGVPVDDKNWP 99
HD TVDIPL+ + K K +EL A EA A+ +AG+ +++ NWP
Sbjct: 63 --HDRGVTVDIPLELPKDLKAKEKELQAREAELKRREQELQRKESAIKKAGIVIEENNWP 120
Query: 100 PIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAV 159
P FP+IHHDI NEIP+H Q +QY+AF +WLG++ CL++N+ AV V W++G G+ I+FL++
Sbjct: 121 PFFPLIHHDIGNEIPIHLQTIQYVAFTTWLGLIFCLLYNIAAVTVAWLKGEGISIWFLSI 180
Query: 160 IYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHXXXXXXXXXXPPVVFHGKSL 219
IY + GVP +YV+WYRPLYRA RTDSALKFGWFF+ Y H PP++F GKSL
Sbjct: 181 IYLISGVPGAYVMWYRPLYRATRTDSALKFGWFFLCYSFHIMFCVLAAVAPPIIFKGKSL 240
Query: 220 TGILAATDVFSDHVLVGIFYLVGFGLFCLESLLSLWVIQKIYLFFRG 266
GIL A ++ + + +VGI Y VGF F +E+LLS+WVIQ++Y++FRG
Sbjct: 241 AGILPAIEIMTYNPVVGILYFVGFAFFAIETLLSIWVIQQVYMYFRG 287
>Medtr4g086230.1 | hypothetical protein | LC |
chr4:33754095-33759909 | 20130731
Length = 79
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 100 PIFPIIHHDIANEIPVHAQRLQYLAFASWLG 130
P FPI HHDI EIPVHAQ LQ L+FAS +G
Sbjct: 43 PFFPITHHDITTEIPVHAQWLQCLSFASCIG 73