Miyakogusa Predicted Gene

Lj2g3v1533030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1533030.1 Non Characterized Hit- tr|D8RP38|D8RP38_SELML
Putative uncharacterized protein OS=Selaginella
moelle,39.6,3e-19,seg,NULL,CUFF.37339.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g027940.1 | hypothetical protein | HC | chr5:11666453-1166...   219   8e-58

>Medtr5g027940.1 | hypothetical protein | HC |
           chr5:11666453-11669433 | 20130731
          Length = 149

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 121/147 (82%), Gaps = 3/147 (2%)

Query: 1   MVGLFSRFSVGRSTHRRTQSAIDEREVMPPNLEXXXXXXXXXXVS--HGIEVAVEFKPVE 58
           MVGLFSRFSVG++ HRRTQSA+DEREV P N E           +  HGIEVAVEFKPVE
Sbjct: 1   MVGLFSRFSVGKNIHRRTQSALDEREVTPANSEVAAAVAASATTATSHGIEVAVEFKPVE 60

Query: 59  HPVEPLDNDSPIQCPLPEPSILNDGRIWKERVSATVRRRGDLPVMKEGGTLESEGAVRKP 118
           HPVEPLDND PIQCPLPEPSILNDGRIWKER SATVRRRGDLPVMKEGG +ESEG   +P
Sbjct: 61  HPVEPLDNDRPIQCPLPEPSILNDGRIWKERASATVRRRGDLPVMKEGGAIESEGPAPRP 120

Query: 119 -RTQSNRMILPSLSAPEHNLLKLLEEC 144
            R+ SNRMILPSLSAPEHNLLKLLEE 
Sbjct: 121 RRSHSNRMILPSLSAPEHNLLKLLEES 147