Miyakogusa Predicted Gene

Lj2g3v1485060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1485060.1 Non Characterized Hit- tr|C6TKM1|C6TKM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55782
PE,89.52,0,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated Golgi
protein,CUFF.37262.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g029890.1 | SNARE associated family protein | HC | chr5:12...   379   e-105
Medtr1g096450.1 | SNARE associated family protein | HC | chr1:43...   300   5e-82
Medtr1g096450.2 | SNARE associated family protein | HC | chr1:43...   252   2e-67
Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like prot...    62   4e-10
Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like prot...    62   6e-10
Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like prot...    47   1e-05

>Medtr5g029890.1 | SNARE associated family protein | HC |
           chr5:12568208-12571694 | 20130731
          Length = 260

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/210 (86%), Positives = 197/210 (93%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MPDSDYSFLK P TL DL+LLRDNLE+YTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL
Sbjct: 51  MPDSDYSFLKLPRTLHDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 110

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGVFKGVALVVF ATAGASSCFFLSK++GRPLL +LWPDKL FFQ QVAKRRK L
Sbjct: 111 LAGALFGVFKGVALVVFTATAGASSCFFLSKIIGRPLLFSLWPDKLKFFQTQVAKRRKSL 170

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLRLTPTLPNTFINFASP+V+VPYHIFF+ TVIGLIPAAYVTVRAGLALGEL+SV
Sbjct: 171 LNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAYVTVRAGLALGELQSV 230

Query: 181 GDLYDFNSVATLCLIGVVSITPTLISKKES 210
           GDLYDFNS+ATL  IG++S+TPTL+ K +S
Sbjct: 231 GDLYDFNSIATLFFIGIISVTPTLMGKSDS 260


>Medtr1g096450.1 | SNARE associated family protein | HC |
           chr1:43444251-43448271 | 20130731
          Length = 276

 Score =  300 bits (769), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 139/209 (66%), Positives = 174/209 (83%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP +  + LK P TL DL+ L+D   TY ++   Q ++GYC  YIFMQTFMIPGT+FMSL
Sbjct: 65  MPATTSANLKLPRTLSDLRTLKDQFSTYANENPVQFIIGYCSTYIFMQTFMIPGTIFMSL 124

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGV +G+ LVVFNATAGASSCFFLSK++GRP+++ LWP++L FFQ+++AKRR  L
Sbjct: 125 LAGALFGVVRGIMLVVFNATAGASSCFFLSKLIGRPIVTWLWPERLRFFQSEIAKRRDKL 184

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLR+TPTLPN FIN ASP+V+VP+HIFF AT+IGLIPA+Y+TVRAGLALG+LKSV
Sbjct: 185 LNYMLFLRITPTLPNLFINLASPIVDVPFHIFFFATLIGLIPASYITVRAGLALGDLKSV 244

Query: 181 GDLYDFNSVATLCLIGVVSITPTLISKKE 209
            DLYDF +++ L LIG VSI PT++ +K 
Sbjct: 245 KDLYDFKTLSVLFLIGFVSILPTVLKRKR 273


>Medtr1g096450.2 | SNARE associated family protein | HC |
           chr1:43444259-43448271 | 20130731
          Length = 269

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 114/173 (65%), Positives = 143/173 (82%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP +  + LK P TL DL+ L+D   TY ++   Q ++GYC  YIFMQTFMIPGT+FMSL
Sbjct: 65  MPATTSANLKLPRTLSDLRTLKDQFSTYANENPVQFIIGYCSTYIFMQTFMIPGTIFMSL 124

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGV +G+ LVVFNATAGASSCFFLSK++GRP+++ LWP++L FFQ+++AKRR  L
Sbjct: 125 LAGALFGVVRGIMLVVFNATAGASSCFFLSKLIGRPIVTWLWPERLRFFQSEIAKRRDKL 184

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLA 173
           LNYMLFLR+TPTLPN FIN ASP+V+VP+HIFF AT+IGLIPA+Y+TVR   +
Sbjct: 185 LNYMLFLRITPTLPNLFINLASPIVDVPFHIFFFATLIGLIPASYITVRVSFS 237


>Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600709-48596099 | 20130731
          Length = 274

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 14  TLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVA 73
           TL   K+L+D L     D      +   V YI +    +P +V ++L  G LFG+  G+ 
Sbjct: 27  TLPIEKILKDFLIWVDQDLGPWGPLALAVAYIPLTILAVPASV-LTLGGGYLFGLPVGIV 85

Query: 74  LVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGLLNYMLFLRLTPTL 133
                AT GA + F L   +G+  +++   D   F    +A +R G    +  LRL P L
Sbjct: 86  ADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSGF-KIVFLLRLVPLL 144

Query: 134 PNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           P   +N+   V  VP   + +A+ +G++P     V AG  L ++  V
Sbjct: 145 PYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDISDV 191


>Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600647-48596094 | 20130731
          Length = 294

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 14  TLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVA 73
           TL   K+L+D L     D      +   V YI +    +P +V ++L  G LFG+  G+ 
Sbjct: 47  TLPIEKILKDFLIWVDQDLGPWGPLALAVAYIPLTILAVPASV-LTLGGGYLFGLPVGIV 105

Query: 74  LVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGLLNYMLFLRLTPTL 133
                AT GA + F L   +G+  +++   D   F    +A +R G    +  LRL P L
Sbjct: 106 ADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSGF-KIVFLLRLVPLL 164

Query: 134 PNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           P   +N+   V  VP   + +A+ +G++P     V AG  L ++  V
Sbjct: 165 PYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDISDV 211


>Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr2:7614462-7621452 | 20130731
          Length = 274

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 2/167 (1%)

Query: 14  TLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVA 73
           TL   K+++D L     D  A   +   V YI +    +P +V ++L  G LFG+  G  
Sbjct: 27  TLPIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPLTVLAVPASV-LTLGGGYLFGLPVGFV 85

Query: 74  LVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGLLNYMLFLRLTPTL 133
                AT GA + F L + +GRP + +   D   F    +A RR G    +L   +    
Sbjct: 86  ADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKFKSVAIAIRRSGFKIVLLLRLVPLLP 145

Query: 134 PNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
            N  +N+   V  V    + +A+ +G++P     V  G  L +L  V
Sbjct: 146 FN-MLNYLLSVTPVSLVEYMLASWLGMMPITLALVYVGTTLKDLSDV 191