Miyakogusa Predicted Gene
- Lj2g3v1468380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1468380.1 tr|G8A0H7|G8A0H7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_103,40.74,2e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.37218.1
(100 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 108 1e-24
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 106 5e-24
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 106 5e-24
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 104 2e-23
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 5e-23
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 101 1e-22
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 101 1e-22
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 101 2e-22
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 101 2e-22
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 101 2e-22
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 2e-22
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 100 3e-22
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 4e-22
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 4e-22
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 5e-22
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 6e-22
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 6e-22
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-21
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-21
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-21
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 98 2e-21
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 98 2e-21
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 98 2e-21
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 98 2e-21
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 3e-21
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 4e-21
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 96 6e-21
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 96 8e-21
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 8e-21
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 9e-21
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 9e-21
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 1e-20
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 2e-20
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-20
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 4e-20
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 4e-20
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 1e-19
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-19
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 91 4e-19
Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |... 90 4e-19
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 4e-19
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 5e-19
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-19
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 9e-19
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 1e-18
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 87 3e-18
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-18
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-18
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-18
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-18
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-18
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-18
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 9e-18
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-17
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-17
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-17
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 6e-17
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-16
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-16
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-16
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 1e-15
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 5e-15
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-14
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 5e-14
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 9e-14
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 1e-13
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 3e-13
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 70 5e-13
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 68 2e-12
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 67 3e-12
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 5e-12
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 66 6e-12
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 66 7e-12
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 9e-12
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-12
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-11
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-11
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 65 2e-11
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 2e-11
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 65 2e-11
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-11
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-11
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 64 3e-11
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-11
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 3e-11
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-11
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 4e-11
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 64 4e-11
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 64 4e-11
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 63 6e-11
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 63 8e-11
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-11
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 9e-11
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 62 9e-11
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 62 1e-10
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-10
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 62 1e-10
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 62 1e-10
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 2e-10
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-10
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-10
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 61 2e-10
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-10
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 61 3e-10
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 3e-10
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 60 3e-10
Medtr3g030490.1 | PPR superfamily protein, putative | LC | chr3:... 60 3e-10
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 4e-10
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 60 5e-10
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 5e-10
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 60 5e-10
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 5e-10
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 60 6e-10
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 59 8e-10
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 59 8e-10
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 8e-10
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 9e-10
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 9e-10
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 59 1e-09
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 59 1e-09
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 58 2e-09
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 58 2e-09
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-09
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 58 2e-09
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 58 2e-09
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 58 3e-09
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 57 3e-09
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 57 3e-09
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-09
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 57 3e-09
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 57 3e-09
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 57 4e-09
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 57 5e-09
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 57 6e-09
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 6e-09
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 6e-09
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 56 8e-09
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 8e-09
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 56 8e-09
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 56 8e-09
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 56 9e-09
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 55 1e-08
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 55 1e-08
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 55 1e-08
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 55 2e-08
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr1g034420.1 | PPR superfamily protein | LC | chr1:12536372-1... 55 2e-08
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 55 2e-08
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 2e-08
Medtr1g042745.1 | PPR repeat protein | HC | chr1:15994857-159945... 55 2e-08
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 55 2e-08
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 55 2e-08
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 55 2e-08
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-08
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-08
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 54 2e-08
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 54 3e-08
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 54 4e-08
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 54 4e-08
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 54 4e-08
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 4e-08
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 4e-08
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 54 4e-08
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 54 4e-08
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 5e-08
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 5e-08
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 53 6e-08
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 6e-08
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 53 6e-08
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 53 7e-08
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 7e-08
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 53 8e-08
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 52 9e-08
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 52 1e-07
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 52 1e-07
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 52 1e-07
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 52 1e-07
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 52 1e-07
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 51 2e-07
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 51 2e-07
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 51 2e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 51 2e-07
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 51 2e-07
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 51 3e-07
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 51 3e-07
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 51 3e-07
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 51 3e-07
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 51 3e-07
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 51 3e-07
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 50 3e-07
Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 4e-07
Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-282396... 50 4e-07
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 50 4e-07
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 50 4e-07
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 4e-07
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 50 5e-07
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 5e-07
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 50 5e-07
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 6e-07
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 50 6e-07
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 50 6e-07
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 50 6e-07
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 7e-07
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 49 8e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 49 8e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 49 8e-07
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 8e-07
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 49 9e-07
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 49 9e-07
Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 9e-07
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 49 1e-06
Medtr5g019030.1 | PPR containing plant-like protein | HC | chr5:... 49 1e-06
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 49 1e-06
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 49 1e-06
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 49 1e-06
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 49 1e-06
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 49 1e-06
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 49 1e-06
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 1e-06
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 48 2e-06
Medtr3g086470.1 | proton gradient regulation protein, putative |... 48 2e-06
Medtr1g037260.1 | PPR containing plant protein | HC | chr1:13702... 48 2e-06
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 48 2e-06
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 47 3e-06
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 47 3e-06
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 47 3e-06
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 47 4e-06
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 47 5e-06
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 46 7e-06
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY+T ISLSHQ++LKGI P VT NIL++CYCHLG++ FAFS+FA I K GY P TF
Sbjct: 74 HYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFN 133
Query: 63 TLINGFCQMGQIRPALQ 79
TLING C G+++ AL
Sbjct: 134 TLINGICLNGKLKEALH 150
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T NILID C G++ A VF + +GY + +T+
Sbjct: 424 HIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN 483
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ING C+ G A LL + E++ ++ PD V Y
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGII---PDAVTYE 518
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL +M KGI P+ VT N LID C LG+I++A+ + + G D+ T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+ C+ I A+ L+++ +D
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKD 437
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K S L +M K I P+ VT N LI +C +GQ+ AF +F + + PDV+TF
Sbjct: 213 KAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTF 272
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++ C+ G I A +L ++ PDVV YS
Sbjct: 273 SILVDALCKDGNITRAKNMLAVMMKQGVI---PDVVTYS 308
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L H+M LK I P+ T +IL+D C G I A ++ A + K+G PDV T+++L++G+
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314
Query: 69 CQMGQIRPA 77
C + ++ A
Sbjct: 315 CLVNEVNKA 323
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++P+ VT + L+D YC + ++N A VF+T+ + G P ++ +ING ++
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L + + PD V Y+
Sbjct: 355 VDEALSLFKEM---CCKGIAPDTVTYN 378
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M GI + +T N LID C I+ A ++ I+ +G QP ++T+ LI+G C
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC 455
Query: 70 QMGQIRPA 77
+ G+++ A
Sbjct: 456 KGGRLKNA 463
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+++ K + + V NI+I+ C ++ A+ +++ + + PDV TF +LI GFC +G
Sbjct: 189 KIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVG 248
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
Q++ A L L + PDV +S
Sbjct: 249 QLKEAFGLFHEM---VLKNINPDVYTFS 273
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 57/78 (73%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M H+ST IS SHQM+LKGI PN VT +ILI+ +CHL Q+N+AFS+ I K GYQP+ T
Sbjct: 67 MNHFSTAISFSHQMELKGIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVT 126
Query: 61 FATLINGFCQMGQIRPAL 78
TLING C GQIR AL
Sbjct: 127 LTTLINGLCLNGQIRKAL 144
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I PN +T N LI + LGQ+ A + + + PDV TF TL++G C
Sbjct: 216 LYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLC 275
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A +L +++PD+V YS
Sbjct: 276 KQGEVKKARHVLAVMIKQ---RVEPDIVTYS 303
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T IL+D C G++ A ++ + +GY +V + ++N
Sbjct: 424 IALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNE 483
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
FC+ G AL LL + ED+ P+ + Y
Sbjct: 484 FCKEGLFDEALSLLSKMEDNGCT---PNAITY 512
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L + + L+G+ PN + NI+I+ C +N A ++F + PD +
Sbjct: 312 VKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVS 371
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+G C+ G+I LL D
Sbjct: 372 YNSLIDGLCKSGRISDVWDLLVEMHD 397
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ VT + L+D Y + ++N A +F T+ RG P+VF++ +ING C+ + A
Sbjct: 295 VEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAA 354
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + + PD V Y+
Sbjct: 355 NLFKEMHSSNMT---PDTVSYN 373
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M G N +T N L+D C Q++ A ++ I+ +G QP+++T+ L
Sbjct: 386 SDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTIL 445
Query: 65 INGFCQMGQIRPALQL 80
++G C+ G++ A ++
Sbjct: 446 VDGLCKNGRLEDAQEI 461
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +QM +K I P+ +T L+D C G++ A V A + K+ +PD+ T+++L++G
Sbjct: 249 VGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDG 308
Query: 68 FCQMGQIRPALQL 80
+ + ++ A L
Sbjct: 309 YFLVKEVNKAKHL 321
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 76/134 (56%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT- 60
KHY TV+SLS QM+ +GI PNFVT NILI+C+C LG I FAFSV A I K GY+PD+ T
Sbjct: 97 KHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITL 156
Query: 61 ----------------------------------FATLINGFCQMGQIRPALQLLRRAED 86
+ TLING C++G+ R ALQLLRR D
Sbjct: 157 NTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV-D 215
Query: 87 DELVQLKPDVVIYS 100
+LVQL + V+Y+
Sbjct: 216 GKLVQL--NAVMYN 227
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV ++ M +GI PN VT L+D YC + Q+N A +F T+ +RG +V +
Sbjct: 344 MKEGKTVFAM---MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHS 400
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +INGFC++ ++ A++L ++ PDVV Y+
Sbjct: 401 YNIMINGFCKIKKVDKAMKLFIEMHHKHII---PDVVTYN 437
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I P+ VT + LI + +G++ A +F + +PDV+TF
Sbjct: 237 KHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTF 296
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ-LKPDVVIYS 100
L++GFC+ G+++ A +L D ++Q +KP+V ++
Sbjct: 297 NILVDGFCKEGRLKKAKNVL----DMMMIQDIKPNVSTFN 332
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G+ N + NI+I+ +C + +++ A +F + + PDV T+ +LI+G C+
Sbjct: 387 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 446
Query: 72 GQIRPALQLLRRAED 86
G+I A QL+ D
Sbjct: 447 GKISYAFQLVNEMHD 461
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ A +V + + +P+V TF TL++G
Sbjct: 278 IDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDG 337
Query: 68 FC---QMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
FC +M + + ++ + +KP+VV Y
Sbjct: 338 FCKDRKMKEGKTVFAMMMKQ------GIKPNVVTY 366
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M ++ I PN T N L+D +C ++ +VFA + K+G +P+V T+ +L++G+C + Q
Sbjct: 319 MMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 378
Query: 74 IRPALQLLR 82
+ A ++
Sbjct: 379 VNKAKKIFN 387
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I+P+ VT N LID C G+I++AF + + RG P++ T
Sbjct: 411 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 470
Query: 61 FATLIN-----------------------GFCQMGQIRPALQLLRRAEDDELVQL 92
+ +++N G CQ G++ A R+ +D LV++
Sbjct: 471 YNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAA----RKVFEDLLVKI 521
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 16/110 (14%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT--- 60
Y T ISL QM+LKGI N VT NILI+C+ LGQ +FSVFA I K+GY P+V T
Sbjct: 76 YHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTT 135
Query: 61 ----------FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TLING C++GQ R ALQLLRR D +LVQ P+VV+Y+
Sbjct: 136 LIKGLCLKVSYGTLINGLCKVGQARAALQLLRRV-DGKLVQ--PNVVMYN 182
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV ++ M +GI PN VT L+D YC + Q+N A S+F T+ + G PD +
Sbjct: 264 MKEGKTVFAM---MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS 320
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +INGFC++ ++ A+ L ++ ++ P+VV Y+
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKMHCKNII---PNVVTYT 357
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+PN VT LID C G+I++A + + RG PD+ T
Sbjct: 331 IKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 390
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
++++++ C+ Q+ A+ LL + +D
Sbjct: 391 YSSILDALCKNHQVDKAIALLTKLKD 416
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ +VFA + K+G +P+V T+ +L++G
Sbjct: 233 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292
Query: 68 FCQMGQIRPA 77
+C + Q+ A
Sbjct: 293 YCLVKQVNKA 302
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + NI+I+ +C + +++ A ++F + + P+V T
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C+ G+I AL+L+ D + PD++ YS
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDR---GVPPDIITYS 392
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K + PN V N +ID C + +N AF +++ + G PDV T++ LI+GF +G+++
Sbjct: 172 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKD 231
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + L +KPDV ++
Sbjct: 232 AIDLFNKM---ILENIKPDVYTFN 252
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFS--------VFATIRKRGYQP 56
S + L +M +G+ P+ +T + ++D C Q++ A + VF + +GY
Sbjct: 370 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 429
Query: 57 DVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
DV+ + +I GFC G AL LL + ED+ + PD Y
Sbjct: 430 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI---PDAKTYE 470
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M +GI P+ VT + LI + +G++ A +F + +PDV+T
Sbjct: 191 VKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYT 250
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
F L++GFC+ G+++ + +KP+VV Y
Sbjct: 251 FNILVDGFCKDGKMKEGKTVFAMMMKQ---GIKPNVVTY 286
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT- 60
KHY TV+SL +M+ +GI PNFV NILI+C+C LG I FAFSV A I K GY+PD T
Sbjct: 84 KHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITL 143
Query: 61 ----------------------------------FATLINGFCQMGQIRPALQLLRRAED 86
+ TLING C++G+ R AL+LLRR D
Sbjct: 144 NTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV-D 202
Query: 87 DELVQLKPDVVIYS 100
+LVQL DVV+YS
Sbjct: 203 GKLVQL--DVVMYS 214
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T ILID C G++ A ++F + +GY V T+ +I G
Sbjct: 440 IALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 499
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G AL LL + +D+ + PD + Y
Sbjct: 500 FCSHGLFDEALSLLSKMKDNSCI---PDAITYE 529
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT N L+D YC + ++N A S+ T+ RG V ++ +INGFC++
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ P+V+ Y+
Sbjct: 366 VDQAMKLFKEMHHK---QIFPNVITYN 389
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I PN +T N LID C G+I++A + + RG QPD+ T
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ + A+ LL + +D ++P++ Y+
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQ---GIRPNMYTYT 459
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M + I P+ T NIL+D +C G++ A + A + K+G +PD+ T+ +L++G
Sbjct: 265 IGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDG 324
Query: 68 FCQMGQIRPALQLLR 82
+C + ++ A +L
Sbjct: 325 YCLVNEVNMAKSILN 339
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K+ + L +M + I N VT + LI +C +G++ A +F + PDV+TF
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ FC+ G+++ A L +KPD+V Y+
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQ---GIKPDIVTYN 319
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 38/135 (28%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+KHY TVISL +Q++ GI PN V+ +ILI+CYCHLGQ+ FAFS+FA I K GY P+ T
Sbjct: 75 LKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTIT 134
Query: 61 -----------------------------------FATLINGFCQMGQIRPALQLLRRAE 85
+ TLING C++G+ R ALQ+LR+ E
Sbjct: 135 LTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIE 194
Query: 86 DDELVQLKPDVVIYS 100
+LV DVV+YS
Sbjct: 195 -GKLVS--TDVVMYS 206
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI + T NILID C G++ A +F + +GY V+T+
Sbjct: 416 HVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYT 475
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVV 97
+ING C G + A LL + ED+ V PD V
Sbjct: 476 IMINGLCLEGLLNEAETLLSKMEDNGCV---PDAV 507
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ + I P+ VT N LID C G+I++A+ + +R G D+ T
Sbjct: 344 IKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIIT 403
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+ C+ + A+ L+++ +D
Sbjct: 404 YNSLIDALCKNHHVDKAIALVKKIKD 429
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ L +M LK I P+ T NIL+D C G+I A S A + K G PDV T++
Sbjct: 252 QFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYS 311
Query: 63 TLINGFC 69
+L++G+C
Sbjct: 312 SLMDGYC 318
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I P VT N LI YC +GQ AF + + + PDV+TF L++
Sbjct: 223 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 282
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I+ A + + ++ PDVV YS
Sbjct: 283 CKEGKIKEAKSGIAVMMKEGVM---PDVVTYS 311
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN + +I+I+ +C + ++ A S+F +R R PD T+ +LI+G C+ G+I A
Sbjct: 327 VAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAW 386
Query: 79 QLLRRAED 86
+L+ D
Sbjct: 387 ELVDEMRD 394
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVF--- 59
HY+TVIS +MQ GI+P+ VT I+I+CYCHL +INFAFS+F I K GYQPD
Sbjct: 73 HYNTVISFFRKMQFNGIVPSIVTLGIVINCYCHLREINFAFSLFGKILKMGYQPDTITLN 132
Query: 60 --------------------------------TFATLINGFCQMGQIRPALQLLRRAEDD 87
T+ATLING C+MG+ R ALQ+LR+ D
Sbjct: 133 TLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTYATLINGLCKMGETRAALQVLRKI-DG 191
Query: 88 ELVQLKPDVVIYS 100
+LV DVV+YS
Sbjct: 192 KLVN--TDVVMYS 202
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI PN T NILID C G++ A VF + +GY ++ T+
Sbjct: 423 HLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYN 482
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LING C+ G A LL + ED++ + P+VV Y
Sbjct: 483 ILINGLCKEGLFDKAEALLSKMEDND---INPNVVTYE 517
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + +SL ++M+ + I PN VT N LID C G+I+ A+ + + G PD+FT
Sbjct: 351 IKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFT 410
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++LI+ C+ + A+ L+++ +D ++P++ Y+
Sbjct: 411 YSSLIDALCKNNHLDKAIALVKKIKDQ---GIQPNMYTYN 447
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 14 MQLKG-IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M +KG I P+ VT N L+D YC + ++N A V +TI + G PD ++ +INGFC++
Sbjct: 293 MMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIK 352
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L ++ P+ V Y+
Sbjct: 353 MVNEALSLFNEM---RCQRISPNTVTYN 377
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L HQM LK I PN T NIL+D C G + A + A + K +PDV T+ +L++G+
Sbjct: 254 GLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGY 313
Query: 69 CQMGQIRPALQLL 81
C + ++ A +L
Sbjct: 314 CLVNEVNKAKHVL 326
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ + NI+I+ +C + +N A S+F +R + P+ T+ +LI+G C+ G+I A
Sbjct: 333 GVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHA 392
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+L+ ++ + PD+ YS
Sbjct: 393 WKLV---DEMHVNGQPPDIFTYS 412
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L +M + G P+ T + LID C ++ A ++ I+ +G QP+++T+ L
Sbjct: 390 SHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNIL 449
Query: 65 INGFCQMGQIRPA 77
I+G C+ G+++ A
Sbjct: 450 IDGLCKGGRLKNA 462
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDV--- 58
HY+T ISL HQ++ GI+P+ VT +ILI+CYCHLGQ+NFAFS+F I K G+QP+
Sbjct: 146 NHYTTAISLFHQLEFNGIIPDIVTLSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTL 205
Query: 59 --------------------------------FTFATLINGFCQMGQIRPALQLLRRAED 86
T+ TLING C+MG+ ALQ+LR+ D
Sbjct: 206 NTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLINGLCKMGKTTEALQVLRKI-D 264
Query: 87 DELVQLKPDVVIYS 100
+LV DVV+YS
Sbjct: 265 GKLVN--TDVVMYS 276
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM +K P VT + LI +C +GQ+ AF +F + P+V+TF L++
Sbjct: 293 ELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDAL 352
Query: 69 CQMGQIRPALQLL 81
C+ G ++ A+ LL
Sbjct: 353 CKEGNVKGAMNLL 365
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 38/135 (28%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+KHY TVISL +Q++ GI PN V+ +ILI+CYCHLGQ+ FAFS+FA I K GY P+ T
Sbjct: 58 LKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTIT 117
Query: 61 -----------------------------------FATLINGFCQMGQIRPALQLLRRAE 85
+ TLING C++G+ R ALQ+LR+ E
Sbjct: 118 LTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIE 177
Query: 86 DDELVQLKPDVVIYS 100
++ +VV+YS
Sbjct: 178 GK---LVRTNVVMYS 189
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L +M LK I P+ T NIL+D C G+I A S A + K G PDV T+++
Sbjct: 236 FKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSS 295
Query: 64 LINGFCQMGQIRPALQLL 81
L++G+C + ++ A +L
Sbjct: 296 LMDGYCLVNEVNKAKHVL 313
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I P VT N LI YC +GQ AF + + + PDV+TF L++
Sbjct: 206 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 265
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I+ A + + ++ PDVV YS
Sbjct: 266 CKEGKIKEAKSGIAVMMKEGVM---PDVVTYS 294
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
HY+ ISLSHQ++L GI + VT NILI+CYCHLG++ FAFS+FA I K G+ P TF
Sbjct: 85 NHYTAAISLSHQLELNGITADTVTFNILINCYCHLGEMTFAFSIFAKILKLGHHPTTITF 144
Query: 62 ATLINGFCQMGQIRPALQ 79
TLING C G+I+ AL
Sbjct: 145 NTLINGMCLNGKIKEALH 162
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + SL ++M+ +GI PN VT + LID C LG+I++A+ +R G PD+ T
Sbjct: 364 IKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICT 423
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+ C+ + A+ L+++ +D
Sbjct: 424 YNSLIDALCKNHHVDKAIVLVKKIKD 449
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ + NI+I+ +C + IN AFS+F +R RG P+ T+++LI+G C++G+I A
Sbjct: 346 GVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYA 405
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ + D+ PD+ Y+
Sbjct: 406 WEFVDEMRDN---GQPPDICTYN 425
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++PN VT + ++D YC + ++N A V +TI + G PD ++ +INGFC++
Sbjct: 307 MMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKM 366
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I A L + P+ V YS
Sbjct: 367 INEAFSLFNEM---RCRGISPNTVTYS 390
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M LK I PN T NIL+D C G + A ++ A + K G P+V T++++++G+C
Sbjct: 268 LFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYC 327
Query: 70 QMGQIRPALQLL 81
+ ++ A +L
Sbjct: 328 LVNEVNKAKHVL 339
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM +K I P+ VT N LI +C +GQ+ AF +F + + P+V+TF L++
Sbjct: 232 ELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDAL 291
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G ++ A LL + ++ P+VV YS
Sbjct: 292 CKEGNLKGAKNLLAVMMKEGVI---PNVVTYS 320
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 71/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY TV+SLS QM+ +GI P+F T NILI+C+C LG I FAFSVFA I + GY P+ TF
Sbjct: 98 KHYHTVLSLSQQMEFEGINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITF 157
Query: 62 ATLINGFCQMGQI-----------------------------------RPALQLLRRAED 86
TLI G C GQI R AL LLRR D
Sbjct: 158 TTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV-D 216
Query: 87 DELVQLKPDVVIYS 100
LVQ P+VV+YS
Sbjct: 217 GNLVQ--PNVVMYS 228
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV ++ M +GI PN VT L+D YC + ++N A S+ T+ +RG PD+ +
Sbjct: 310 MKEGKTVFAM---MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 366
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LI+GFC++ ++ A+ L + ++ PDVV Y+
Sbjct: 367 YNILIDGFCKIKKVDEAMNLFKEMHHKHII---PDVVTYN 403
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M +G+ P+ + NILID +C + +++ A ++F + + PDV T
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 401
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C++G+I AL+L+ D + PD++ YS
Sbjct: 402 YNSLIDGLCKLGKISYALKLVDEMHDR---GVPPDIITYS 438
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+P+ VT N LID C LG+I++A + + RG PD+ T
Sbjct: 377 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 436
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ Q+ A+ LL + +D ++P++ Y+
Sbjct: 437 YSSILDALCKNHQVDKAIALLTKLKDQ---GIRPNMYTYT 473
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T ILID C G++ A ++F + +GY V T+ +I+G
Sbjct: 454 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 513
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G AL LL + +D+ + PD V Y
Sbjct: 514 FCNKGLFDEALTLLSKMKDNSCI---PDAVTYE 543
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M KGI PN VT + LI + +GQ+ A +F + +PDV+TF
Sbjct: 238 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 297
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
L++GFC+ G+++ + +KP+VV Y
Sbjct: 298 NILVDGFCKDGKMKEGKTVFAMMMKQ---GIKPNVVTY 332
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ +VFA + K+G +P+V T+ +L++G
Sbjct: 279 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 338
Query: 68 FCQMGQIRPALQLL 81
+C + ++ A +L
Sbjct: 339 YCLVKEVNKAKSIL 352
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN V + +ID C +N AF +++ + +G P+V T++ LI+GF +GQ++ A+
Sbjct: 220 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 279
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + L +KPDV ++
Sbjct: 280 DLFNKM---ILENIKPDVYTFN 298
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G+ P+ +T + ++D C Q++ A ++ ++ +G +P+++T+ L
Sbjct: 416 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 475
Query: 65 INGFCQMGQIRPA 77
I+G C+ G++ A
Sbjct: 476 IDGLCKGGRLEDA 488
>Medtr0652s0020.1 | PPR superfamily protein | LC |
scaffold0652:7157-3598 | 20130731
Length = 364
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY+TVISLSH+++ GI PN T NILI+CYCHLG+++FAFS+ + I K G+QP+ T
Sbjct: 154 KHYTTVISLSHRLEFHGITPNLFTFNILINCYCHLGEMDFAFSMLSKILKMGFQPNTVTL 213
Query: 62 ATLINGFCQMGQIRPALQ 79
TL+ G C G+++ AL
Sbjct: 214 NTLVKGMCLNGKVKEALH 231
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 35/120 (29%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+KHY TVISLS+Q++ GI PN V+ +ILI+CYCHLGQ+ +AFS+ A I K GY P+ T
Sbjct: 74 LKHYPTVISLSYQLEFNGIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTIT 133
Query: 61 F-----------------------------------ATLINGFCQMGQIRPALQLLRRAE 85
F TLING C+MG+ + ALQ+LRR E
Sbjct: 134 FNTLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIE 193
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ +GI PN VT + LID C G+ + A+ + + G P++FT
Sbjct: 354 IKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFT 413
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++LI+ C+ + A+ L+++ +D ++PD+ Y+
Sbjct: 414 YSSLIDALCKNNHLDKAMTLVKKIKDQ---GIQPDMYTYN 450
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H ++L +++ +GI P+ T NILID C G++ A VF + +GY ++ ++
Sbjct: 426 HLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYN 485
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LING C+ G A LL + + ++++ PD V Y
Sbjct: 486 ILINGLCKDGLFDKAEALLSKMKGNDVI---PDAVTYE 520
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L HQM LK I P+ T NIL+D C G + A S + K G PDV T+ ++++G
Sbjct: 257 GLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGH 316
Query: 69 CQMGQIRPALQLL 81
C + ++ A LL
Sbjct: 317 CLVNEVNKAKHLL 329
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++P+ VT N ++D +C + ++N A + + I + G P ++++ +INGFC++
Sbjct: 297 MMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKM 356
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I AL L + P+ V YS
Sbjct: 357 IDEALSLFYEM---RCRGIAPNTVTYS 380
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S L +M + G PN T + LID C ++ A ++ I+ +G QPD++T+
Sbjct: 392 FSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNI 451
Query: 64 LINGFCQMGQIRPA 77
LI+G C+ G+++ A
Sbjct: 452 LIDGLCKGGRLKNA 465
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K S L +M K I P VT + LI +C +GQ+ AF + + + PDV+TF
Sbjct: 215 KLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTF 274
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C+ G ++ A L + ++ PDVV Y+
Sbjct: 275 NILVDALCKEGDVKGAKSFLVVMMKEGVI---PDVVTYN 310
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ + +I+I+ +C + I+ A S+F +R RG P+ T+++LI+G C+ G+ A
Sbjct: 336 GVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCA 395
Query: 78 LQLL 81
+L+
Sbjct: 396 WELV 399
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+++ K + N V N +ID C ++ A+ +++ + + P V TF+ LI GFC +G
Sbjct: 191 RIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVG 250
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
Q++ A L+ + L + PDV ++
Sbjct: 251 QLKEAFGLVHQM---VLKNINPDVYTFN 275
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 72/134 (53%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT- 60
KHY VI L +M+L GI N++T NILI+ YCHL QIN AFSVFA I K GYQPD+ T
Sbjct: 24 KHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITY 83
Query: 61 ----------------------------------FATLINGFCQMGQIRPALQLLRRAED 86
+ TLING C++GQ PAL+LLR+ E
Sbjct: 84 TTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEG 143
Query: 87 DELVQLKPDVVIYS 100
+ +PDVV+Y+
Sbjct: 144 E---ICRPDVVMYN 154
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI N T NIL+D C G++ A VF + +G+ DV T++ +ING
Sbjct: 380 IALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMING 439
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ AL LL + ED V PD + Y
Sbjct: 440 LCKESLFDEALTLLSKMEDKGCV---PDAIAYE 469
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + L M+ + ++P+ V + LID C G+IN A + RG P+V T
Sbjct: 303 MKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVIT 362
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+ C+ Q+ A+ LL++ +D
Sbjct: 363 YTSLIDALCKSHQVDKAIALLKKIKD 388
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K + PN VT LI +C +GQ++ AF + + + P+V TF TL++G C+ G
Sbjct: 175 EMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEG 234
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++R A L+ + + PDV Y+
Sbjct: 235 KMREAKSLVAVMMKE---GVGPDVFTYN 259
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M LK + PN T N L+D C G++ A S+ A + K G PDVFT+ L++G+
Sbjct: 206 GLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 265
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
++ + +M +G PN +T LID C Q++ A ++ I+ +G Q +++T+ L
Sbjct: 342 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 401
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G C+ G++ A ++ +D + DVV YS
Sbjct: 402 VDGLCKDGRLTDAQKVF---QDLLMKGHNVDVVTYS 434
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 72/134 (53%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY TV+ LS +M+ +GI PN V NILI+C+C LG I FAFSVFA I K GY P+ TF
Sbjct: 101 KHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITF 160
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLI+G C++G+ R AL LLRR D
Sbjct: 161 TTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV-D 219
Query: 87 DELVQLKPDVVIYS 100
+LVQ P+VV+YS
Sbjct: 220 GKLVQ--PNVVMYS 231
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M KGI PN VT + LI + +G++ A +F + +PDV+TF
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ FC+ G+I AL+L+ D P++V YS
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDR---GQPPNIVTYS 336
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++M + I P+ T NIL+D +C G+I++A + + RG P++ T++++++
Sbjct: 282 VDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ ++ A+ LL + +D ++P++ Y+
Sbjct: 342 LCKTHRVDKAVALLTKLKDQ---GIRPNMHTYT 371
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L ++ K + PN V + +ID C +N AF +++ + +G P+V T++ LI
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+GF +G+++ A+ L + + +KPDV ++
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISE---NIKPDVYTFN 301
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L +++ +GI PN T ILID C G++ A ++F + +GY V T+ + G
Sbjct: 352 VALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYG 411
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC+ G A LL + E++ + PD Y
Sbjct: 412 FCKKGLFDEASALLSKMEENGCI---PDAKTYE 441
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 99.8 bits (247), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 55/78 (70%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY+T ISL HQ++L I P VT NILI+CY HLG+I FAFS+FA I K GY P TF+
Sbjct: 27 HYTTAISLFHQLELNRITPTIVTLNILINCYGHLGEITFAFSIFAKILKLGYHPTTITFS 86
Query: 63 TLINGFCQMGQIRPALQL 80
TLING C G+++ AL
Sbjct: 87 TLINGMCLKGKLKEALHF 104
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T NILID C G++ A +F + +GY+ V+T+ T+ING
Sbjct: 379 IALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMING 438
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C G A+ LL + ED+ PDVV Y
Sbjct: 439 LCLEGLFDEAMTLLEKMEDNGCT---PDVVTY 467
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M LK I PN T ILID C G+I A +V A + K G +P V T+ TL++G+C
Sbjct: 209 LFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC 268
Query: 70 QMGQIRPA 77
++ A
Sbjct: 269 LDNEVNKA 276
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K VI++ M +G+ P VT N L+D YC ++N A +VF I KR P+V +
Sbjct: 238 IKEAKNVIAV---MMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHS 294
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +ING C++ + AL + + +P+ V YS
Sbjct: 295 YTIIINGLCKIKMVDEALNFFKE------MHCEPNTVTYS 328
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L QM LK I PN VT + LI +C +GQ+ AF +F + + P+++TF LI+ C
Sbjct: 174 LYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALC 233
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I+ A ++ + ++P VV Y+
Sbjct: 234 KEGKIKEAKNVIAVMMKE---GVEPTVVTYN 261
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT + LID C G+I+ A+ + + RG ++ T+ +L++ C+ Q+ A+ L
Sbjct: 322 PNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIAL 381
Query: 81 LRRAEDDELVQLKPDVVIYS 100
+++ +D ++P++ Y+
Sbjct: 382 VKKIKDQ---GIQPNINTYN 398
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 99.4 bits (246), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 37/135 (27%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ H++ IS S QM+LKGI P+ T +ILI+C+C LGQINFAFS+ I K GY+P+ T
Sbjct: 67 LNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGKILKLGYEPNTVT 126
Query: 61 -----------------------------------FATLINGFCQMGQIRPALQLLRRAE 85
+ TLING C+ G+ R ALQLLR+ E
Sbjct: 127 LTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETRAALQLLRKIE 186
Query: 86 DDELVQLKPDVVIYS 100
L+ ++PDV++Y+
Sbjct: 187 G--LLLVRPDVIMYT 199
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +K I PN VT N LI +C +GQ A +F + + P+V+TF L++G C
Sbjct: 217 LYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLC 276
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A +L ++PDVV Y+
Sbjct: 277 KEGEVKRAKSVLTVMIKQ---HVEPDVVTYN 304
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 5 STVISLSHQMQLK--GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
S V L +MQ+K G+ P+ T +ILID C G+I A+ + + RG +V T+
Sbjct: 387 SDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYT 446
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+LI+G C+ + A+ L + +D + ++P+V Y+
Sbjct: 447 SLIDGLCKNHNLDKAIALFTKMKD---LGVEPNVYTYN 481
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFAT--IRKRGYQPDV 58
+K + L +M K + PN +T N LID C G+I+ + + I+ G +PDV
Sbjct: 348 VKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDV 407
Query: 59 FTFATLINGFCQMGQIRPALQLLRRAED 86
+T++ LI+ C+ G+I A L+ D
Sbjct: 408 YTYSILIDRLCKSGRIADAWYLIDEMHD 435
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ VT N L+D Y + ++N A VF T+ +RG P+V +++ +ING C++ + A+
Sbjct: 296 VEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAV 355
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + L P+ + Y+
Sbjct: 356 ILFKEMHSKSLT---PNTITYN 374
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ + L ++M LK PN T NIL+D C G++ A SV + K+ +PDV T+
Sbjct: 245 QFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYN 304
Query: 63 TLINGFCQMGQIRPA 77
+L++G+ + ++ A
Sbjct: 305 SLMDGYFLVKEVNKA 319
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ PN + +++I+ C + ++ A +F + + P+ T+ +LI+G C+ G+I
Sbjct: 329 RGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISD 388
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
L+ + +L +KPDV YS
Sbjct: 389 VWYLIDEMQIKDL-GVKPDVYTYS 411
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 27 NILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRR 83
N ++ L N A S + +G QPD+FT + LIN FCQ+GQI A +L +
Sbjct: 58 NKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILGK 114
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 73/134 (54%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y T +SLS QM+ GI P+F+T N+L++C+ LG I F+FSVFA I K+GY PD TF
Sbjct: 72 KQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTF 131
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLING C++G+ + A+QLLRR D
Sbjct: 132 TILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV-D 190
Query: 87 DELVQLKPDVVIYS 100
+LV +P+VV+YS
Sbjct: 191 GKLV--RPNVVMYS 202
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I L +++ KGI P+ T +LI+ C +G+++ A VF + +GY P+++T+
Sbjct: 423 HVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYT 482
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+LINGFC G L +L + +D+ + P+ + Y
Sbjct: 483 SLINGFCNKGFFDEGLAMLSKMKDNGCI---PNAITYE 517
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K + + VT N L+D YC + Q+N A S+F + +RG PDV++++ +INGFC++
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L E+ Q+ P+VV Y+
Sbjct: 354 VDEAMKLF---EEMHCKQIFPNVVTYN 377
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G N +T N ++D C ++ A + I+++G QPD+FT+ L
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING C++G++ A ++ ED + P++ Y+
Sbjct: 450 INGLCKVGRLDDAQKVF---EDLLVKGYSPNIYTYT 482
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K I P+ VT + LI +C +G++ +A +F + P+V+TF+ LI+GFC+ G
Sbjct: 223 EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG 282
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++R A +L +K DVV Y+
Sbjct: 283 KVREAKNVLAVMMKK---NVKLDVVTYN 307
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ L ++ K + PN V + +ID C +N AF ++ + + PDV T+++L
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFC +G+++ A+ L R D + P+V +S
Sbjct: 240 ISGFCVVGKLKYAVDLFNRMISD---NINPNVYTFS 272
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I PN VT N L+D C G+ + A + + RG ++ T
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ + A+ LL + ++ ++PD+ Y+
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEK---GIQPDIFTYT 447
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + SL + M +G+ P+ + +I+I+ +C + ++ A +F + + P+V T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +L++G C+ G+ AL+L+ D
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHD 401
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ ++T +S SHQM+LKGI P+ VT +ILI+ +CHL Q+N+AFS+ I K GYQP+ T
Sbjct: 81 LNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVT 140
Query: 61 FATLINGFCQMGQIRPAL 78
TLING C GQIR AL
Sbjct: 141 LTTLINGLCLNGQIRKAL 158
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K ++PN VT N LID C LG+++ + + RG D+ T+
Sbjct: 334 KMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITY 393
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
+L +G C+ Q+ A+ LL++ +D
Sbjct: 394 NSLFDGLCKNHQVDRAIALLKKIKD 418
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ VT + L+D Y + ++N A +F T+ RG P+VF++ +ING C+ + A+
Sbjct: 281 VEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAV 340
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + +++ P+ V Y+
Sbjct: 341 NLFKEMHSKDMI---PNTVTYN 359
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P+ + IL C G++ A V+ + +GY D + +ING
Sbjct: 410 IALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMING 469
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G AL LL + +D+ PD V Y
Sbjct: 470 LCKEGFFDEALSLLSKMKDNGCT---PDGVTYE 499
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ ++T +S SHQM+LKGI P+ VT +ILI+ +CHL Q+N+AFS+ I K GYQP+ T
Sbjct: 81 LNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVT 140
Query: 61 FATLINGFCQMGQIRPAL 78
TLING C GQIR AL
Sbjct: 141 LTTLINGLCLNGQIRKAL 158
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K ++PN VT N LID C LG+++ + + RG D+ T+
Sbjct: 334 KMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITY 393
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
+L +G C+ Q+ A+ LL++ +D
Sbjct: 394 NSLFDGLCKNHQVDRAIALLKKIKD 418
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ VT + L+D Y + ++N A +F T+ RG P+VF++ +ING C+ + A+
Sbjct: 281 VEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAV 340
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + +++ P+ V Y+
Sbjct: 341 NLFKEMHSKDMI---PNTVTYN 359
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P+ + IL C G++ A V+ + +GY D + +ING
Sbjct: 410 IALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMING 469
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G AL LL + +D+ PD V Y
Sbjct: 470 LCKEGFFDEALSLLSKMKDNGCT---PDGVTYE 499
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISL HQ++ GI P+ VT NILI+CYCHL +++F+FS+ A I K GYQPD TF
Sbjct: 78 HYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFN 137
Query: 63 TLINGFCQMGQIRPALQ 79
TLI G C G+++ AL
Sbjct: 138 TLIKGLCVNGKVKEALH 154
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ +GI PN VT + LID C G+ ++A+ + + G+ P++FT
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+ C+ QI A+ L+++ +D ++PD+ Y+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQ---GIQPDMCTYN 452
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P+ T NILID C G+++ A VF + +GY DV T+ +ING
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++G A LL + ED+ ++ PD V Y
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGII---PDAVTYE 522
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L H++ LK I P+ T NI++D C G++ A SV A + K PDV T+ +
Sbjct: 254 FKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNS 313
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++G+C + ++ A +L +++ PD YS
Sbjct: 314 LMDGYCLVNEVNKAKHVLIIISK---IRVAPDAHSYS 347
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K I PN VT N LI +C +GQ AF +F I + PDV+TF +++ C
Sbjct: 225 LYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALC 284
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++ + ++ PDVV Y+
Sbjct: 285 KEGKMKEAKSVIAVMMKECVM---PDVVTYN 312
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
YS L +M G PN T N LID C QI+ A ++ I+ +G QPD+ T+
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 64 LINGFCQMGQIRPA 77
LI+G C+ G++ A
Sbjct: 454 LIDGLCKGGRLHNA 467
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK +VI++ M + +MP+ VT N L+D YC + ++N A V I K PD +
Sbjct: 289 MKEAKSVIAV---MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHS 345
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C++ + AL L + P+ V YS
Sbjct: 346 YSIMINGLCKVKMVDEALSLFYEM---RCRGIAPNTVTYS 382
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISL HQ++ GI P+ VT NILI+CYCHL +++F+FS+ A I K GYQPD TF
Sbjct: 78 HYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFN 137
Query: 63 TLINGFCQMGQIRPALQ 79
TLI G C G+++ AL
Sbjct: 138 TLIKGLCVNGKVKEALH 154
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ +GI PN VT + LID C G+ ++A+ + + G+ P++FT
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+ C+ QI A+ L+++ +D ++PD+ Y+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQ---GIQPDMCTYN 452
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P+ T NILID C G+++ A VF + +GY DV T+ +ING
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++G A LL + ED+ ++ PD V Y
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGII---PDAVTYE 522
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L H++ LK I P+ T NI++D C G++ A SV A + K PDV T+ +
Sbjct: 254 FKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNS 313
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++G+C + ++ A +L +++ PD YS
Sbjct: 314 LMDGYCLVNEVNKAKHVLIIISK---IRVAPDAHSYS 347
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K I PN VT N LI +C +GQ AF +F I + PDV+TF +++ C
Sbjct: 225 LYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALC 284
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++ + ++ PDVV Y+
Sbjct: 285 KEGKMKEAKSVIAVMMKECVM---PDVVTYN 312
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
YS L +M G PN T N LID C QI+ A ++ I+ +G QPD+ T+
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 64 LINGFCQMGQIRPA 77
LI+G C+ G++ A
Sbjct: 454 LIDGLCKGGRLHNA 467
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK +VI++ M + +MP+ VT N L+D YC + ++N A V I K PD +
Sbjct: 289 MKEAKSVIAV---MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHS 345
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C++ + AL L + P+ V YS
Sbjct: 346 YSIMINGLCKVKMVDEALSLFYEM---RCRGIAPNTVTYS 382
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISL HQ++ GI P+ VT NILI+CYCHL +++F+FS+ A I K GYQPD TF
Sbjct: 78 HYPTAISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFN 137
Query: 63 TLINGFCQMGQIRPALQ 79
TLI G C G+++ AL
Sbjct: 138 TLIKGLCVNGKVKEALH 154
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ +GI PN VT + LID C G+ ++A+ + + G+ P++FT
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+ C+ QI A+ L+++ +D ++PD+ Y+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQ---GIQPDMCTYN 452
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P+ T NILID C G+++ A VF + +GY DV T+ +ING
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++G A LL + ED+ ++ PD V Y
Sbjct: 493 LCKVGLFDEAEVLLSKMEDNGII---PDAVTYE 522
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L H++ LK I P+ T NI++D C G++ A SV A + K PDV T+ +
Sbjct: 254 FKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNS 313
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++G+C + ++ A +L +++ PD YS
Sbjct: 314 LMDGYCLVNEVNKAKHVLIIISK---IRVAPDAHSYS 347
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K I PN VT N LI +C +GQ AF +F I + PDV+TF +++ C
Sbjct: 225 LYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALC 284
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++ + ++ PDVV Y+
Sbjct: 285 KEGKMKEAKSVIAVMMKECVM---PDVVTYN 312
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
YS L +M G PN T N LID C QI+ A ++ I+ +G QPD+ T+
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 64 LINGFCQMGQIRPA 77
LI+G C+ G++ A
Sbjct: 454 LIDGLCKGGRLHNA 467
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK +VI++ M + +MP+ VT N L+D YC + ++N A V I K PD +
Sbjct: 289 MKEAKSVIAV---MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHS 345
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C++ + AL L + P+ V YS
Sbjct: 346 YSIMINGLCKVKMVDEALSLFYEM---RCRGIAPNTVTYS 382
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 53/77 (68%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY TV+ LS +M+ +GI PN V NILI+C+C LG I FAFSVFA I K GY PD TF
Sbjct: 99 KHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF 158
Query: 62 ATLINGFCQMGQIRPAL 78
TLI G C GQI+ A
Sbjct: 159 TTLIKGLCLKGQIQQAF 175
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV + M +GI PNFVT N L+D YC + ++N A S+F T+ + G PD+ +
Sbjct: 311 MKEGKTVFDM---MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +INGFC++ + A+ L + ++ PDVV YS
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNII---PDVVTYS 404
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN V N +ID C + +N AF +F+ + +G PDV T++ LI+GFC +G++ A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + L +KPDV ++
Sbjct: 281 DLFNKM---ILENIKPDVYTFN 299
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I+L +++ KGI PN T +ILI C G++ A VF + +G+ +V T+ +I
Sbjct: 454 AIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQ 513
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC G AL LL + ED+ + PD Y
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCI---PDAKTYE 544
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L QM +G+ P T N ++D C + Q++ A ++ ++ +G QP+++T++ L
Sbjct: 417 SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476
Query: 65 INGFCQMGQIRPALQLLR 82
I G CQ G++ A ++
Sbjct: 477 IKGLCQSGKLEDARKVFE 494
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M KGI P+ VT + LI +C LG++N A +F + +PDV+T
Sbjct: 238 VKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
F L+N FC+ G+++ + D +++ +KP+ V Y+
Sbjct: 298 FNILVNAFCKDGKMKEGKTVF-----DMMMKQGIKPNFVTYN 334
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + ++L +M K I+P+ VT + LID G+I++A + + RG P + T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C++ Q+ A+ LL + +D ++P++ YS
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDK---GIQPNMYTYS 474
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 13/100 (13%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ H+ TVISLS ++L+GI + V NIL++C+C LGQ+N+AFSV A I K GYQPD T
Sbjct: 56 INHFHTVISLSRLIELRGIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVT 115
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI G C+ GQI L +KP+VV+YS
Sbjct: 116 LTTLIKGLCRSGQIEGLL-------------VKPNVVMYS 142
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +M+ +GI PN T IL+D C G++ A ++ + +GY +V + ++N
Sbjct: 292 IALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNE 351
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
FC+ G AL LL + ED+ PD + Y
Sbjct: 352 FCKEGLFDEALSLLSKMEDNGCT---PDAITY 380
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 4 YSTVIS------LSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQP 56
YST+I LS + +K G+ PN VT L+D Y + ++N A +F TI +RG P
Sbjct: 141 YSTIIDSLCKDKLSGAVMIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTP 200
Query: 57 DVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ ++ +ING C+ + A L + D + PD + Y+
Sbjct: 201 ELHSYNVMINGLCKNKMVNEAANLFK---DMHSRNMTPDTISYN 241
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M + N +T N L+D C Q++ A ++ ++ +G QP+++T+ L
Sbjct: 254 SDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTIL 313
Query: 65 INGFCQMGQIRPALQL 80
++G C+ G++ A ++
Sbjct: 314 VDGLCKNGRLADAREI 329
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 71/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY TV+ LS +M+ +GI PN V NILI+C+C LG I FAFSVFA I K GY PD TF
Sbjct: 99 KHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF 158
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLI+G C++G+ R AL LL+R D
Sbjct: 159 TTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-D 217
Query: 87 DELVQLKPDVVIYS 100
LVQ P+VV+Y+
Sbjct: 218 GNLVQ--PNVVMYN 229
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV + M +GI PNFVT N L+D YC + ++N A S+F T+ + G PD+ +
Sbjct: 311 MKEGKTVFDM---MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +INGFC++ + A+ L + ++ PDVV YS
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNII---PDVVTYS 404
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN V N +ID C + +N AF +F+ + +G PDV T++ LI+GFC +G+++ A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + L +KPDV ++
Sbjct: 281 DLFNKM---ILENIKPDVYTFN 299
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L QM +G+ PN T N ++D C Q++ A ++ + +G+QPD+ T++ L
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
I G CQ G++ A R+ +D LV+
Sbjct: 477 IKGLCQSGKLEDA----RKVFEDLLVK 499
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I+L + + KG P+ T +ILI C G++ A VF + +GY DV+ + +I
Sbjct: 454 AIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC G AL LL + ED+ + PD Y
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCI---PDAKTYE 544
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + ++L +M K I+P+ VT + LID G+I++A + + RG P++ T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ Q+ A+ LL + +D +PD+ YS
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDK---GFQPDISTYS 474
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M KGI P+ VT + LI +C LG++ A +F + +PDV+T
Sbjct: 238 VKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ-LKPDVVIYS 100
F L+N FC+ G+++ + D + Q +KP+ V Y+
Sbjct: 298 FNILVNAFCKDGKMKEG----KTVFDMMMKQGIKPNFVTYN 334
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT- 60
KHY T ISL +Q++L GI P+ VT NI+I+CYCHL ++NFAFS+ I K G+ PD+ T
Sbjct: 68 KHYPTAISLFYQLELNGITPSIVTFNIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTL 127
Query: 61 ----------------------------------FATLINGFCQMGQIRPALQLLRRAED 86
+ TLING C++G+ R ALQ+LR+ E
Sbjct: 128 TTLIKGMCLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIE- 186
Query: 87 DELVQLKPDVVIYS 100
+LV DVV+Y+
Sbjct: 187 GKLVN--TDVVMYN 198
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H I L +++ + I PN T NILID C G++ A +F + +GY V+T+
Sbjct: 418 RHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTY 477
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ING C G + AL LL + ED+ + P+ V +
Sbjct: 478 NIMINGLCLEGLLDEALALLSKMEDNGCI---PNAVTFE 513
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK V+++ M +G+ P+ VT L+D YC + ++N A ++F T+ +RG P+V
Sbjct: 280 MKEAKNVLAM---MVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHC 336
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C+ I A+ + + +++ P+ V YS
Sbjct: 337 YSVVINGLCKNKLIDEAMDFFKEMQSKKII---PNTVTYS 373
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M LK I PN T NIL+D C G++ A +V A + K+G +PD+ T +L++G+C
Sbjct: 251 LFNEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYC 310
Query: 70 QMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ ++ A L + +VQ + P+V YS
Sbjct: 311 LVNEVNKAKALF-----NTMVQRGVMPNVHCYS 338
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ K I+PN VT + LID C G+I+ A+ + + RG +V TF++L++ C+
Sbjct: 359 EMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNR 418
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L+++ +D + ++P++ Y+
Sbjct: 419 HVDKAIELVKKLKDRD---IQPNMYTYN 443
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I P VT + LI +C +GQ AF +F + + P+V+TF L++
Sbjct: 215 ELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVDAL 274
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+++ A +L +KPD+V ++
Sbjct: 275 CKEGKMKEAKNVLAMMVKQ---GVKPDIVTHT 303
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISLS +++ GI P+ T NILI+CYCH+ ++NFAFS+ A I K GY+PD TF
Sbjct: 83 HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142
Query: 63 TLINGFCQMGQIRPALQ 79
TLI G C G+++ AL
Sbjct: 143 TLIKGLCLNGKVKEALH 159
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+MPN VT + L+D YC + Q+N A V TI + G P+ ++ T+INGFC++
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L D + + PD V Y+
Sbjct: 364 VDEALSLFN---DMQFKGIAPDKVTYN 387
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T NILI C +G++ A VF + +GY + +T+
Sbjct: 433 HVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYN 492
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++NG C+ G A LL + +D+ ++ PD V Y
Sbjct: 493 IMVNGLCKEGLFDEAEALLSKMDDNGII---PDAVTYE 527
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL + MQ KGI P+ VT N LID C G+I++A+ + + G ++FT
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LI+ C+ + A+ L+++ +D ++PD+ ++
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQ---GIQPDMYTFN 457
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M LK I P++ T NIL+D C G + A ++ + K G P+V T+++L++G+
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Query: 69 CQMGQIRPALQLLR 82
C + Q+ A +L
Sbjct: 324 CLVNQVNKAKHVLN 337
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM K I P+ VT + LI +C +GQ+ AF +F + + PD +TF L++
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G ++ A +L + ++ P+VV YS
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVM---PNVVTYS 317
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T + + ++ K + N V N +ID C + A+ +++ + + PDV TF+ LI
Sbjct: 191 TALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALI 250
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPD 95
GFC +GQ+ A L R L + PD
Sbjct: 251 YGFCIVGQLEEAFGLFREM---VLKNINPD 277
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISLS +++ GI P+ T NILI+CYCH+ ++NFAFS+ A I K GY+PD TF
Sbjct: 83 HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142
Query: 63 TLINGFCQMGQIRPALQ 79
TLI G C G+++ AL
Sbjct: 143 TLIKGLCLNGKVKEALH 159
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+MPN VT + L+D YC + Q+N A V TI + G P+ ++ T+INGFC++
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L D + + PD V Y+
Sbjct: 364 VDEALSLFN---DMQFKGIAPDKVTYN 387
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T NILI C +G++ A VF + +GY + +T+
Sbjct: 433 HVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYN 492
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++NG C+ G A LL + +D+ ++ PD V Y
Sbjct: 493 IMVNGLCKEGLFDEAEALLSKMDDNGII---PDAVTYE 527
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL + MQ KGI P+ VT N LID C G+I++A+ + + G ++FT
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LI+ C+ + A+ L+++ +D ++PD+ ++
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQ---GIQPDMYTFN 457
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M LK I P++ T NIL+D C G + A ++ + K G P+V T+++L++G+
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Query: 69 CQMGQIRPALQLLR 82
C + Q+ A +L
Sbjct: 324 CLVNQVNKAKHVLN 337
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM K I P+ VT + LI +C +GQ+ AF +F + + PD +TF L++
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G ++ A +L + ++ P+VV YS
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVM---PNVVTYS 317
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T + + ++ K + N V N +ID C + A+ +++ + + PDV TF+ LI
Sbjct: 191 TALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALI 250
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPD 95
GFC +GQ+ A L R L + PD
Sbjct: 251 YGFCIVGQLEEAFGLFREM---VLKNINPD 277
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 24/119 (20%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKR---------- 52
HY TV+SLS QM+ KG+ P+ T +ILI+CYCHLGQ+ FAFSVFA I K
Sbjct: 82 HYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNE 141
Query: 53 -----------GYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ + T+ LING C+MGQ R ALQ+LR+ E +LV +VV+YS
Sbjct: 142 ALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE-GKLVN--TNVVMYS 197
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H I+L +++ GI PN T NILID C GQ+ A VF + +GY + +T+
Sbjct: 417 QHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTY 476
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ING C+ G A LL + ED+ ++ PD V Y
Sbjct: 477 NIMINGLCKEGLFDEAEVLLSKMEDNGII---PDAVTYE 512
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L ++M +K I P+ T NIL+D C G+I A +V A + K G +P V T+ T
Sbjct: 244 FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNT 303
Query: 64 LINGFC---QMGQIRPALQLLRR 83
L++G+C ++G+ + L ++ R
Sbjct: 304 LMDGYCLVNEVGKAKHVLSIISR 326
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L H+M +GI P+ VT N LID C G+I +A+ + + D+ T
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVT 405
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+ FC+ + A+ L+++ ++ ++P++ Y+
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEH---GIQPNMCTYN 442
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +K I P VT + LI +C +G+ AF +F + + PD +TF L++
Sbjct: 214 GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDAL 273
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I+ A ++ + ++P VV Y+
Sbjct: 274 CKEGKIKEAKNVIAVMMKE---GVEPTVVTYN 302
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 53/79 (67%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ H+ T IS S QM+LK I P+ T NILI+C+CHLG +NFAFSV A I K G+ PD T
Sbjct: 77 LNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVT 136
Query: 61 FATLINGFCQMGQIRPALQ 79
TLI G C G++R AL
Sbjct: 137 ITTLIKGLCLNGKVREALH 155
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T IL+D C G++ A +V+ + +GY DV + ++NG
Sbjct: 434 ITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNG 493
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G AL L+ + ED+ + PD V Y
Sbjct: 494 LCKEGLFDEALSLVSKMEDNGCI---PDAVTYE 523
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K + PN VT N LID G+I+ A+ + + RG DV T+
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++L++ C+ Q+ A+ L+ + +D ++P++ Y+
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQ---GIQPNIYTYT 453
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK V+++ M +G+ N VT N L+D Y + Q N A VF T+ +RG PDV +
Sbjct: 290 MKKARNVLAV---MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQS 346
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C+ + A+ L + + P+ V Y+
Sbjct: 347 YSIMINGLCKTKMVDEAVNLFKEMHSKSMA---PNTVTYN 383
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L ++M +G + +T + L+D C Q++ A ++ I+ +G QP+++T+ L
Sbjct: 396 SDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTIL 455
Query: 65 INGFCQMGQIRPA 77
++G C+ G+++ A
Sbjct: 456 VDGLCKNGRLKDA 468
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ H+ T IS S QM+LKGI PN VT ILI+ +CHL Q+NFAFS+ I K GY+P+ T
Sbjct: 75 LNHFHTAISFSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVT 134
Query: 61 FATLINGFCQMGQIRPALQ 79
TLING C G+++ A
Sbjct: 135 LTTLINGLCLNGEVKKAFH 153
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I PN VT + LI +C +GQ+ A +F + + PDV+TF LI+G
Sbjct: 223 ELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGL 282
Query: 69 CQMGQIRPALQLL 81
C+ G++R A LL
Sbjct: 283 CKNGEMRKARNLL 295
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI + T +LID C G++ A VF + +GY DV T+ +I+G C+ G
Sbjct: 512 GIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEV 571
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L LL + E++ PD + Y
Sbjct: 572 LTLLSKMEEN---GCAPDAITYE 591
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +M+ G+ PN T NILID C G+I A+ + + RG +V T+ +LI+G
Sbjct: 432 IALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDG 491
Query: 68 FCQMGQIRPALQLLRRAED 86
C+ + A++ + D
Sbjct: 492 LCKNHNLDKAIEFFTKIND 510
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M L+ ++PN VT N LI C G+I++ + + RG +V T+
Sbjct: 356 KMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITY 415
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ C+ + A+ L + +D + ++P+V Y+
Sbjct: 416 TSLMDALCKNHNLDKAIALFTKMKD---LGVEPNVYTYN 451
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G N VT LID C ++ A F I G Q DV T+ LI+G C
Sbjct: 469 LIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLC 528
Query: 70 QMGQIRPALQLLR 82
+ G+++ AL++ R
Sbjct: 529 KGGRLKNALEVFR 541
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V+ L +M +G N +T L+D C ++ A ++F ++ G +P+V+T+ L
Sbjct: 394 SYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNIL 453
Query: 65 INGFCQMGQIRPALQLLRRAED 86
I+ C+ G+I A L+ D
Sbjct: 454 IDRLCKSGRIADAWYLIDEMHD 475
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL ++ + P+ V +ID C + A+ +++ + ++ P+V T++TLI G
Sbjct: 187 LSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYG 246
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC +GQ++ A++L L + PDV ++
Sbjct: 247 FCIVGQLKDAVRLFNEM---MLKNIDPDVYTFN 276
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 8/98 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY T ISL +Q++L + P+ VT NI+I+CYCHLG+INFAFS+ I K G+QP++ T
Sbjct: 84 HYPTAISLFNQLELNRVTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLT 143
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI G+ R ALQ+LR+ E +LV DVV+Y+
Sbjct: 144 TLIK-----GETRAALQMLRKIE-GKLVN--TDVVMYT 173
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L H+M L I+PN TSNIL+D C G + A ++ A + K+G PDV T+ +L++G+
Sbjct: 195 GLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGY 254
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C + Q+ A + ++KPDV Y+
Sbjct: 255 CLVNQVNKAKHVFNILGKR---KIKPDVHSYT 283
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++P+ VT L+D YC + Q+N A VF + KR +PDV ++ +ING C++
Sbjct: 235 MMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKM 294
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L + + +P++V YS
Sbjct: 295 VDEALNLFKE------MHCEPNMVTYS 315
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 39/134 (29%)
Query: 3 HYSTVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
HY TV+ L +M+L G+ PN VT NIL++CY HLGQ++FAFSV A I K GY PDV TF
Sbjct: 82 HYPTVVLLCRKMELNDGVKPNLVTFNILLNCYSHLGQMSFAFSVLAKIIKIGYHPDVVTF 141
Query: 62 ATLINGF-----------------------------------CQMGQIRPALQLLRRAED 86
TLING+ C+ G+ R ALQLLR+ D
Sbjct: 142 NTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQV-D 200
Query: 87 DELVQLKPDVVIYS 100
+LVQ P VV+Y+
Sbjct: 201 GKLVQ--PHVVMYN 212
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L ++M K I PN +T N L+ C +GQ+ A S+F + P V+TF
Sbjct: 222 KLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTF 281
Query: 62 ATLINGFCQMGQIRPA 77
L++GFC+ G+++ A
Sbjct: 282 NILVDGFCKEGKVKDA 297
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
ISL M + I P T NIL+D +C G++ A V A + K G + + T++TLI G
Sbjct: 263 ISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRG 322
Query: 68 FCQMGQIRPALQLLRR 83
FC +G+++ A+ L +
Sbjct: 323 FCIVGKLKEAVDLFNK 338
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY--QPDVFTFATLI 65
I L + + KGI PN T I ID C G++ A+ VF + Y + +T+ +I
Sbjct: 508 IELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMI 567
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+GFC+ G AL LL +D+ + PD V Y
Sbjct: 568 HGFCRKGLFDEALTLLSNMKDNSCI---PDTVTYK 599
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K + PN +T + L+ YC + ++N A +F ++ +RG DV ++ +I+ FC++
Sbjct: 374 MMEKDVTPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKM 433
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +L + Q+ PDVV YS
Sbjct: 434 VDEARKLFEEMQSK---QIFPDVVTYS 457
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L Q+ K + P+ V N+LID C +N AF ++ + + P+V T+ TL++G
Sbjct: 193 LQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHG 252
Query: 68 FCQMGQIRPALQLLR 82
C +GQ++ A+ L +
Sbjct: 253 LCIVGQLKDAISLFK 267
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +MQ K I P+ VT + L+D C +I A + + RG P++FT++++++
Sbjct: 439 KLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDAL 498
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ Q+ A++L + +D ++P+V Y+
Sbjct: 499 LKKHQVEEAIELFKEFKDK---GIQPNVYTYT 527
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L +M +G PN T + ++D Q+ A +F + +G QP+V+T+ I
Sbjct: 471 NALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFI 530
Query: 66 NGFCQMGQIRPALQLLR 82
+G C+ G++ A ++
Sbjct: 531 DGLCKNGRLEDAWEVFE 547
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY V+SLS +M+ +GI + V +ILI+ +C LG I FAFSV A I K GY+PD TF
Sbjct: 28 KHYHNVVSLSQKMEFEGIKLDLVNCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITF 87
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLING C++G+ R AL+LLRR D
Sbjct: 88 TTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAALELLRRV-D 146
Query: 87 DELVQLKPDVVIYS 100
+LVQL D V+YS
Sbjct: 147 GKLVQL--DAVMYS 158
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I PN VT + LI +C +G++ A +F + P+V+TF
Sbjct: 168 KHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTF 227
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++GFC+ G+++ A +L +KPDVV YS
Sbjct: 228 SILVDGFCKEGRVKEAKNVLAMMMKQ---GIKPDVVTYS 263
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT + L+D YC + ++N A S+F T+ RG +V +++ +INGFC++
Sbjct: 250 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKM 309
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ PDV+ YS
Sbjct: 310 VDEAMKLFKEMHHK---QIFPDVITYS 333
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T IL+ C G++ A VF + +GY DV+ +
Sbjct: 379 HVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYT 438
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I GFC G AL LL + E++ + PD Y
Sbjct: 439 VMIQGFCDKGLFDEALALLSKMEENGCI---PDAKTYE 473
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I PN T +IL+D +C G++ A +V A + K+G +PDV T+++L++G
Sbjct: 209 IDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDG 268
Query: 68 FCQMGQIRPA 77
+C + ++ A
Sbjct: 269 YCLVNEVNKA 278
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I P+ +T + LID C G+I++A + + RG QPD+ T
Sbjct: 307 IKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIIT 366
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ + A+ LL + + ++PD+ Y+
Sbjct: 367 YNSILDALCKKHHVDKAIALLTKLKGQ---GIRPDMNTYT 403
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ + M +G+ N + +I+I+ +C + ++ A +F + + PDV T++ LI+G
Sbjct: 280 SIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGL 339
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I AL+L+ D +PD++ Y+
Sbjct: 340 CKSGRISYALELVDEMHDR---GQQPDIITYN 368
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G P+ +T N ++D C ++ A ++ ++ +G +PD+ T+ L
Sbjct: 346 SYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTIL 405
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
+ G C+ G++ A R+ +D LV+
Sbjct: 406 VKGLCRSGKLEDA----RKVFEDLLVK 428
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVF--- 59
HY+T +SL +M+L G+ N +T +ILI+C+CHLGQ +FSVFA I K GY+P+V
Sbjct: 80 HYTTAVSLHRKMELNGVASNLITMSILINCFCHLGQNPLSFSVFAKILKMGYEPNVIILT 139
Query: 60 --------------------------------TFATLINGFCQMGQIRPALQLLRRAEDD 87
++ LING C++G+ R AL+LLRR D
Sbjct: 140 TIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCKVGETRAALELLRRV-DG 198
Query: 88 ELVQLKPDVVIYS 100
++VQ P+VV+Y+
Sbjct: 199 KIVQ--PNVVMYT 209
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN VT N LID YC + Q+N A + T+ +RG DV +++ +INGFC++ + A
Sbjct: 305 GVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEA 364
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ L + + +LV PD + YS
Sbjct: 365 IDLFKEMQGRQLV---PDTITYS 384
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L H+M L+ I PN T +IL+D +C G+ A +V A + K G +P+V T+ +LI+G
Sbjct: 260 IGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDG 319
Query: 68 FCQMGQIRPA 77
+C + Q+ A
Sbjct: 320 YCLVKQVNKA 329
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K I L +MQ + ++P+ +T + LID C G+I+ A+ + + + RG QP++ T
Sbjct: 358 IKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIIT 417
Query: 61 FATLINGFCQMGQIRPALQLLRR 83
+ +L+N CQ + A+ LLR+
Sbjct: 418 YNSLLNALCQNHHVDKAIALLRK 440
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L + + +GI P T ILI C G++ A VF + +GY DV+T+
Sbjct: 430 HVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYT 489
Query: 63 TLINGFCQMGQIRPALQLLRRAEDD 87
+I GFC G AL LL + +D+
Sbjct: 490 AMIRGFCYEGLFDEALALLSKMKDN 514
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L ++ K + PN V ++ID C +N AF++++ + + PDV T+ LI
Sbjct: 188 AALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLI 247
Query: 66 NGFCQMGQIRPALQLLRR 83
+GFC +GQ++ A+ LL +
Sbjct: 248 SGFCVVGQLKDAIGLLHK 265
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G++ + + +I+I+ +C + ++ A +F ++ R PD T+++LI+G C+
Sbjct: 334 NTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKS 393
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+I A +L+ D +P+++ Y+
Sbjct: 394 GRISDAWELVSEMSDR---GQQPNIITYN 419
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M K I P+ VT N LI +C +GQ+ A + + P+V+T + L++ F
Sbjct: 226 NLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAF 285
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+ + A ++ + +KP+VV Y+
Sbjct: 286 CKDGKPKEAKAVVAVLMKN---GVKPNVVTYN 314
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L +M +G PN +T N L++ C ++ A ++ + +G QP + T+ L
Sbjct: 397 SDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTIL 456
Query: 65 INGFCQMGQIRPA 77
I G C G+++ A
Sbjct: 457 IKGLCMSGRLKDA 469
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+Y ISL H++QL I P+ VT N +I+CYCHLG+++FAFSV A I K GY PD T
Sbjct: 63 NYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLT 122
Query: 63 T-----------------------------------LINGFCQMGQIRPALQLLRRAEDD 87
T LING C+MG+ R ALQ+LR+ D
Sbjct: 123 TLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKI-DG 181
Query: 88 ELVQLKPDVVIYS 100
+LV +VV+YS
Sbjct: 182 KLVN--TNVVMYS 192
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L +++ +GI PN T NILID C G+ A +F + +GY+ V+T+ +ING
Sbjct: 400 VALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMING 459
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G A+ LL + ED+ PDVV Y
Sbjct: 460 LCLEGLFDEAMTLLEKMEDNGCT---PDVVTYE 489
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ KGI P+ VT + LID C +I+ A+ + + RG DV T
Sbjct: 323 IKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVIT 382
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + ++ C+ Q+ A+ L+++ +D ++P++ Y+
Sbjct: 383 YTSFLHALCKNHQVDKAVALVKKIKDQ---GIQPNINTYN 419
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLG-----------------QINFAFSVF 46
+ L H+M L I P+ T NIL+D C G Q+N A VF
Sbjct: 239 FKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVF 298
Query: 47 ATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I KR PDV ++ +I C++ + AL L + PD V YS
Sbjct: 299 NIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEM---RCKGITPDKVTYS 349
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 9/106 (8%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIR------KRGY 54
+ H+ TVISLSHQM+L+GI + V NIL++C+CHLGQ+ V T+ +G+
Sbjct: 21 INHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGF 80
Query: 55 QPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
Q + ++ TLI+G C+ G+ R A+Q+LR D LVQ P+VV+YS
Sbjct: 81 QLNQVSYGTLIDGLCKAGETRAAMQVLRNI-DGLLVQ--PNVVMYS 123
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK V+++ M + + P+ +T N L+D Y + Q N A VF T+ +RG PDV +
Sbjct: 205 MKKARNVLAV---MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHS 261
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +ING C+ + A+ LL+ + P+ V YS
Sbjct: 262 YSVMINGLCKTKMVDEAVNLLKEMHSKSMA---PNTVTYS 298
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M +G + +T N L+D C Q++ A ++ I+ +G QPD++T+ L++G
Sbjct: 315 DLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Query: 69 CQMGQIRPA 77
C+ G+++ A
Sbjct: 375 CKNGRLKDA 383
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K + PN VT + LID G+I A+ + + RG DV T+
Sbjct: 273 KMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITY 332
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ C+ Q+ A+ LL + +D ++PD+ Y+
Sbjct: 333 NSLLDALCKNHQVDKAITLLTKIKDQ---GIQPDIYTYT 368
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM LK I P+ +T N L+ +G++ A +F + + +PD++TF L++G
Sbjct: 140 DLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGL 199
Query: 69 CQMGQIRPALQLL----RRAEDDELVQLKPDVVIYS 100
C+ G+++ A +L +++ D PDV+ Y+
Sbjct: 200 CKEGEMKKARNVLAVMIKQSVD-------PDVITYN 228
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 38/135 (28%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ H++ IS S QM+LK I P+ T +ILI+C+CHL Q+N+AFS+ I K GY+P+ T
Sbjct: 68 LNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQLNYAFSILGKILKLGYEPNTVT 127
Query: 61 -----------------------------------FATLINGFCQMGQIRPALQLLRRAE 85
+ TLING C+ G+ + AL LLR+ E
Sbjct: 128 LTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIE 187
Query: 86 DDELVQLKPDVVIYS 100
+KPDVV+Y+
Sbjct: 188 GS---LVKPDVVMYN 199
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K ++PN VT N LID C LG+++ A+ + RG ++ T+
Sbjct: 349 KMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITY 408
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
++L++G C+ Q+ A+ LL + ++
Sbjct: 409 SSLLDGLCKNHQVDKAITLLTKIKN 433
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ PN T + L+D + ++N A VF TI +RG DV +++ +INGFC+ +
Sbjct: 294 QGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDE 353
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + +V P+ V Y+
Sbjct: 354 AVNLFKEMHSKNMV---PNTVTYN 374
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++M LK + PN T +ILID C G++ A +V A + K+G +P++ T+++L++G
Sbjct: 250 VGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDG 309
Query: 68 FCQMGQIRPA 77
+ ++ A
Sbjct: 310 CFSVKEVNKA 319
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G N +T + L+D C Q++ A ++ I+ +G Q D++T+ L++G C+ G
Sbjct: 395 EMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNG 454
Query: 73 QIRPALQL 80
++R A ++
Sbjct: 455 KLRDAQEV 462
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI + T IL+D C G++ A V+ + Y D + +ING
Sbjct: 425 ITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMING 484
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G AL LL + ED+ PD V Y
Sbjct: 485 LCKEGFFDEALSLLSKMEDNGCT---PDGVTYE 514
>Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0086:32654-31850 | 20130731
Length = 167
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRK----------- 51
HY+TV+SLS QM+ GI+P+ + NI I+CYCHL Q+NFAFSV I K
Sbjct: 26 HYTTVLSLSRQMEFNGIIPDLLMLNISINCYCHLHQMNFAFSVNTKIFKIGYLPTTVTLT 85
Query: 52 ------------------------RGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDD 87
RG++ + ++ TLING C+MG+ R ALQ+L+R E
Sbjct: 86 TLINGLCLNGKVQEALNFHDHVIARGFRLNEVSYGTLINGLCKMGETRAALQMLKRIE-G 144
Query: 88 ELVQLKPDVVIYS 100
+LV +VV+YS
Sbjct: 145 KLVD--TNVVMYS 155
>Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:13907484-13905015 | 20130731
Length = 245
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT- 60
HY T ISL +Q++L + P+ VT NI+I+CYCHLG+INFAFS+ I K G+QP++ T
Sbjct: 60 NHYPTAISLFNQLELNRVTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTL 119
Query: 61 ----------------------------------FATLINGFCQMGQIRPALQLLRRAED 86
+ TLI G C++G+ R ALQ+LR+ E
Sbjct: 120 TTLIKGMCLNSNVKEALHFHNHVLAHGFHLDQVSYGTLIYGLCKIGETRAALQMLRKIEG 179
Query: 87 DELVQLKPDVVIYS 100
+ DVV+Y+
Sbjct: 180 K---LVNTDVVMYT 190
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 89.7 bits (221), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 69/133 (51%), Gaps = 37/133 (27%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF- 61
++STVISL QM+ + I P+ VT +ILI+CY HL Q+ FAFS+F I K G PDV F
Sbjct: 72 NFSTVISLFRQMEFQRIHPSIVTLSILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFN 131
Query: 62 ----------------------------------ATLINGFCQMGQIRPALQLLRRAEDD 87
TLING C++GQ + ALQLLRR E
Sbjct: 132 TLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQ 191
Query: 88 ELVQLKPDVVIYS 100
L +PDVV+YS
Sbjct: 192 LL--FRPDVVMYS 202
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+ PN VT ++L+D YC + ++N A +F ++ +RG PD+ ++ +ING C+M
Sbjct: 294 MMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKM 353
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L E+ + DV+ YS
Sbjct: 354 LDEAVSLF---EEMHSTNMTLDVITYS 377
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +M+ +GI + T NILID C G+++ A +F + + Y DV T+ +ING
Sbjct: 428 IALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMING 487
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ + AL LL + E + PD + Y
Sbjct: 488 LCKESLLDEALTLLSKMEAKGCI---PDAITYE 517
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ V +I+ID C +N AF +++ + ++ PDVFT+ +LI+GFC +GQ++ L
Sbjct: 196 PDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVL 255
Query: 81 LRRAEDDELVQLKPDVVIYS 100
L L + PDV ++
Sbjct: 256 LNEM---VLKNINPDVYTFN 272
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G P+ +T N L+D C Q + A ++ + ++ +G Q D+FT+ LI+G C
Sbjct: 395 LFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLC 454
Query: 70 QMGQIRPALQLLRRAEDDELVQ-LKPDVVIYS 100
+ G++ A ++ R D L++ DVV Y+
Sbjct: 455 KDGRLDDAQKIFR----DLLIKSYNVDVVTYN 482
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L ++M LK I P+ T N L+D G++ A + A + K G +P++ T++ L++
Sbjct: 252 VFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMD 311
Query: 67 GFCQMGQIRPA 77
G+C + ++ A
Sbjct: 312 GYCLVNEVNKA 322
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I P+ T LI +C +GQ+ F + + + PDV+TF
Sbjct: 212 KHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTF 271
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TL++ + G+++ A L+ + ++P++V YS
Sbjct: 272 NTLVDALFKEGKVKEAKCLIAVMMKE---GVEPNIVTYS 307
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 89.4 bits (220), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
YS +S ++ KGI P+ T N+LI+C+ LG +FAFS+FA I KRGY PD+ TF T
Sbjct: 79 YSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNT 138
Query: 64 LINGFCQMGQIRPALQLLRR 83
LING C G++ AL +
Sbjct: 139 LINGLCLKGEVHKALNFFEK 158
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+ P+ +T N L+D YC + +++ A ++F T+ +RG +V +++ +INGFC++
Sbjct: 299 MMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKM 358
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + E++ PD + YS
Sbjct: 359 MDEAMNLFQEMHCKEII---PDTIAYS 382
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+P+ + + LID +C G+I A + + RG P++ T
Sbjct: 356 VKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIIT 415
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +++ C++ + + LLR+ ++ ++PD Y+
Sbjct: 416 YNSILYALCKIHHVEKTIALLRKI---KVKGIQPDAYTYT 452
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K + P+ T N +I +C +G++ A +F ++ + D +TF TL++ FC
Sbjct: 225 LYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFC 284
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G +R ++ + +KPD++ Y+
Sbjct: 285 KEGNVREGKAVVAVMMKE---GVKPDIITYN 312
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++ + M +G+ N + +I+I+ +C + ++ A ++F + + PD
Sbjct: 321 VKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIA 380
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++LI+GFC+ G+I AL+L+ D P+++ Y+
Sbjct: 381 YSSLIDGFCKSGRIPQALELVDEMHDR---GQPPNIITYN 417
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L + M+L+ + + T N L+ +C G + +V A + K G +PD+ T+ +L++G
Sbjct: 258 IGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDG 317
Query: 68 FCQMGQIRPA 77
+C + ++ A
Sbjct: 318 YCLVKEVDKA 327
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 38/132 (28%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT--- 60
Y T ISL +M+ GI + VT NILI+C+ LG +F+FSVFA I K+GY+P+ T
Sbjct: 72 YQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTT 131
Query: 61 --------------------------------FATLINGFCQMGQIRPALQLLRRAEDDE 88
+ TLING C++GQ ALQLLRR D +
Sbjct: 132 LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV-DGK 190
Query: 89 LVQLKPDVVIYS 100
LVQ P+VV+Y+
Sbjct: 191 LVQ--PNVVMYN 200
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M KGI P+ VT + LI +C LG++N A +F + PDV+T
Sbjct: 209 VKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYT 268
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
F+ L++GFC+ G+++ A +L +KPDVV Y
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQ---GIKPDVVTY 304
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L ++ K + PN V N +ID C + +N AF +++ + +G PDV T++ L
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSAL 237
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFC +G++ A+ L + +E + PDV +S
Sbjct: 238 ISGFCILGKLNDAIGLFNKMISEE---INPDVYTFS 270
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+P+ VT N LID C G+I++A + + RG D T
Sbjct: 349 IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKIT 408
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ Q+ A+ LL + +D+ ++PD+ Y+
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDE---GIQPDMYTYT 445
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT L+D YC + Q+N A S+F T+ + G +V ++ +INGFC++ +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + ++ PDVV Y+
Sbjct: 352 VDEAMNLFKEMHCKNII---PDVVTYN 375
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +M+ +GI P+ T ILID C G++ A ++F + +GY V+T+ +I G
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 68 FCQMGQIRPALQLLRRAEDD 87
FC AL LL + ED+
Sbjct: 486 FCDNDLFDKALALLSKMEDN 505
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ I L ++M + I P+ T +IL+D +C G++ A +V A + K+G +PDV T+ +L
Sbjct: 248 NDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSL 307
Query: 65 INGFCQMGQIRPA 77
++G+C + Q+ A
Sbjct: 308 MDGYCLVKQVNKA 320
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ N + NI+I+ +C + +++ A ++F + + PDV T
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+G C+ G+I AL+L+ D
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHD 399
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G+ + +T N ++D C Q++ A ++ ++ G QPD++T+ L
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTIL 447
Query: 65 INGFCQMGQIRPA 77
I+G C+ G+++ A
Sbjct: 448 IDGLCKGGRLKDA 460
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 69/135 (51%), Gaps = 38/135 (28%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ Y TV+SL QM+L GI + VT +ILI+ +C LG I FAFSV A I K GY+PD T
Sbjct: 81 LNQYPTVVSLHPQMELNGIASDLVTCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTIT 140
Query: 61 F-----------------------------------ATLINGFCQMGQIRPALQLLRRAE 85
F TLING C++G+ AL+LLRR
Sbjct: 141 FTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETIAALELLRRF- 199
Query: 86 DDELVQLKPDVVIYS 100
D + VQ PDVV+Y+
Sbjct: 200 DGKFVQ--PDVVMYN 212
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT + L+D YC + ++N A S+F T+ RG + +++ +INGFC++
Sbjct: 293 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKM 352
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ PDV+ YS
Sbjct: 353 VDEAMKLFKEMHHK---QIFPDVITYS 376
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L QM +G+ PN VT N ++D C Q++ A ++ + +G QP V+T+ L
Sbjct: 389 SYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTIL 448
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
I+G C+ G+++ A R +D LV+
Sbjct: 449 IDGLCKGGRLKDA----RNIFEDLLVK 471
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L + + +GI P+ T ILID C G++ A ++F + +GY V T+ +I G
Sbjct: 427 IALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQG 486
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G + +L LL + E++ + PD V Y
Sbjct: 487 FCSHGLLDESLALLSKMEENGCI---PDAVTYE 516
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ + M +G+ N + +I+I+ +C + ++ A +F + + PDV T++ LI+G
Sbjct: 323 SIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGL 382
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I ALQL+ + D + P++V Y+
Sbjct: 383 CKSGRISYALQLVDQMHDRGVA---PNIVTYN 411
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I P+ +T + LID C G+I++A + + RG P++ T
Sbjct: 350 IKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVT 409
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ Q+ A+ LL + +D ++P V Y+
Sbjct: 410 YNSILDALCKTHQVDKAIALLTKFKDQ---GIQPSVYTYT 446
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSN------------------------ILIDCYCHLG 37
KH + L +M K I PN VT + IL+D +C G
Sbjct: 222 KHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEG 281
Query: 38 QINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
++ A +V A + K+G +PDV T+++L++G+C + ++ A
Sbjct: 282 RVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKA 321
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K + P+ V N +ID C +N AF +++ + + P+V T++ LI+GFC +G+++
Sbjct: 202 KFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKD 261
Query: 77 ALQLL---------------RRAEDDELVQL------KPDVVIYS 100
A R E ++ + KPDVV YS
Sbjct: 262 AFDFFNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYS 306
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 87.4 bits (215), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 41/135 (30%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ HY T ISL Q++ GI P+ VT IL++CYCH G I F FS+ I K GY+P+ T
Sbjct: 23 INHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSIT 82
Query: 61 FATLI-----------------------------------NGFCQMGQIRPALQLLRRAE 85
F TLI NG C+MG+ R A+Q+LR+
Sbjct: 83 FTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK-- 140
Query: 86 DDELVQLKPDVVIYS 100
+ DVV+YS
Sbjct: 141 ----TWVNADVVMYS 151
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI PN T LID C G++ A+ +F I GY V+T+
Sbjct: 337 HLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYN 396
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ING C+ G AL LL R ED+ + PD V Y
Sbjct: 397 VMINGLCKKGLFDEALALLSRMEDNACI---PDAVSY 430
Score = 63.2 bits (152), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L M KG+ PN VT ++D YC + Q+N A ++F + + G +P+V+ + +ING
Sbjct: 202 MNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIING 261
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ ++ A+ L + ++ PDVV Y+
Sbjct: 262 LCKKKRVDEAMNLFKEM---HWKKINPDVVTYN 291
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M K I P+ VT NILID C LG+I+ + + +R G D+ T+
Sbjct: 266 KRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITY 325
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ C+ + A+ L++ +D ++P+V Y+
Sbjct: 326 NSLLHALCKNHHLDQAITLVKEIKDQ---GIQPNVCTYT 361
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +M KGI PN T +IL+D C + A ++ A + K+G +P+V T+
Sbjct: 161 KFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTY 220
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+++G+C + Q+ AL + + +VQ ++P+V Y+
Sbjct: 221 GAIMDGYCLVNQVNKALNIF-----NVMVQEGVEPNVWCYN 256
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+ PN NI+I+ C +++ A ++F + + PDV T+ LI+G C++G+
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 74 IRPALQLL 81
I +L+L+
Sbjct: 303 ISTSLELV 310
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT-- 60
HYS V+SL QM+ GI N VT +ILI+C+ LG + +FSVF+ I K+GY+PD T
Sbjct: 84 HYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLT 143
Query: 61 ---------------------------------FATLINGFCQMGQIRPALQLLRRAEDD 87
+ TLING C++GQ + AL++LRR D
Sbjct: 144 TLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI-DG 202
Query: 88 ELVQLKPDVVIYS 100
+LV+L DVV+Y+
Sbjct: 203 KLVRL--DVVMYN 213
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K + PN VT N L++ YC + ++N A S+F T+ + G PDV +++ +I+GFC++
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L E+ Q+ PDVV Y+
Sbjct: 365 VDEAMKLF---EEMHCKQIFPDVVTYN 388
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M I L H+M L+ I P T +IL+D +C G++ A +VF + K+ +P++ T
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +L+NG+C + ++ A + + + PDV YS
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQ---IGVAPDVHSYS 353
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I P+ VT N LID C G+I++A + + RG P++ T
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +L++ C+ + A++LL + +D ++P V Y+
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDH---NIQPSVCTYN 458
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I L +++ I P+ T NILI+ C G++ A VF + GY DV+T+
Sbjct: 434 HVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYN 493
Query: 63 TLINGFCQMGQIRP 76
T+I GFC+ G + P
Sbjct: 494 TMIKGFCKKGFVIP 507
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G PN +T N L+D C ++ A + ++ QP V T+ L
Sbjct: 401 SYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNIL 460
Query: 65 INGFCQMGQIRPALQLLR 82
ING C+ G+++ A ++
Sbjct: 461 INGLCKSGRLKDAQKVFE 478
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ + M G+ P+ + +I+I +C + ++ A +F + + PDV T+ +LI+G
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I AL+L+ D P+++ Y+
Sbjct: 395 CKSGRISYALKLIGEMHDR---GQPPNIITYN 423
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K I P VT N LI C +GQ+ A + + P V+TF+ L++ FC+ G
Sbjct: 234 EMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEG 293
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++ A + + +KP++V Y+
Sbjct: 294 KVKEAKNVFVVMMKKD---VKPNIVTYN 318
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH+ST +SL QM+L GI +F T NILI+C+ LG + +FS+FA I K+GY P TF
Sbjct: 75 KHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITF 134
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLING C++G+I ALQLL+R D
Sbjct: 135 NTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV-D 193
Query: 87 DELVQLKPDVVIYS 100
+LVQ P+ V+Y+
Sbjct: 194 GKLVQ--PNAVMYN 205
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM K I P+ T N LI + + ++N+A +F ++K P+V+TF L++GF
Sbjct: 222 DLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGF 281
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G++ A +L D+ +KPDVV Y+
Sbjct: 282 CKEGKVNDAKVVLAIMMKDD---IKPDVVTYN 310
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K I+L +M+ + I+PN VT + LID C LG+I +A + + RG P++ T
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ + A+ LL +D ++PD+ Y+
Sbjct: 414 YSSILDALCKNHHVDKAIALLTNLKDQ---GIRPDMYTYT 450
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L ++ +GI P+ T ILI C G++ A +VF + +GY DV+ +
Sbjct: 426 HVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYT 485
Query: 63 TLINGFCQMGQIRPALQLLRRAEDD 87
+I GFC G AL LL + ED+
Sbjct: 486 VMIQGFCDKGFFDKALALLSKMEDN 510
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L ++M+ + I PN T NIL+D +C G++N A V A + K +PDV T+ +L++
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314
Query: 67 GFCQMGQIRPA 77
G+C + ++ A
Sbjct: 315 GYCSINKVNKA 325
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M I P+ VT N L+D YC + ++N A +F ++ G +V + T++NGFC++
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L +++ P+VV YS
Sbjct: 357 VDEAINLFEEMRCRKII---PNVVTYS 380
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L +M +G PN VT + ++D C ++ A ++ ++ +G +PD++T+ LI
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454
Query: 67 GFCQMGQIRPA 77
G CQ G++ A
Sbjct: 455 GLCQSGRLEDA 465
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M G++ N +++ +C + ++ A ++F +R R P+V T+++LI+G C++G
Sbjct: 331 SMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLG 390
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I AL+L+ D P++V YS
Sbjct: 391 RIFYALKLVDEMHDR---GQPPNIVTYS 415
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L ++ K + PN V N++ID C +N AF +++ + + PDVFT+ L
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GF + ++ A+ L + + + + P+V ++
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKE---NINPNVYTFN 275
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH+ST +SL QM+L GI +F T NILI+C+ LG + +FS+FA I K+GY P TF
Sbjct: 75 KHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITF 134
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLING C++G+I ALQLL+R D
Sbjct: 135 NTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV-D 193
Query: 87 DELVQLKPDVVIYS 100
+LVQ P+ V+Y+
Sbjct: 194 GKLVQ--PNAVMYN 205
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM K I P+ T N LI + + ++N+A +F ++K P+V+TF L++GF
Sbjct: 222 DLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGF 281
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G++ A +L D+ +KPDVV Y+
Sbjct: 282 CKEGKVNDAKVVLAIMMKDD---IKPDVVTYN 310
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K I+L +M+ + I+PN VT + LID C LG+I +A + + RG P++ T
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ + A+ LL +D ++PD+ Y+
Sbjct: 414 YSSILDALCKNHHVDKAIALLTNLKDQ---GIRPDMYTYT 450
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L ++ +GI P+ T ILI C G++ A +VF + +GY DV+ +
Sbjct: 426 HVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYT 485
Query: 63 TLINGFCQMGQIRPALQLLRRAEDD 87
+I GFC G AL LL + ED+
Sbjct: 486 VMIQGFCDKGFFDKALALLSKMEDN 510
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L ++M+ + I PN T NIL+D +C G++N A V A + K +PDV T+ +L++
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314
Query: 67 GFCQMGQIRPA 77
G+C + ++ A
Sbjct: 315 GYCSINKVNKA 325
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M I P+ VT N L+D YC + ++N A +F ++ G +V + T++NGFC++
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L +++ P+VV YS
Sbjct: 357 VDEAINLFEEMRCRKII---PNVVTYS 380
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L +M +G PN VT + ++D C ++ A ++ ++ +G +PD++T+ LI
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454
Query: 67 GFCQMGQIRPA 77
G CQ G++ A
Sbjct: 455 GLCQSGRLEDA 465
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M G++ N +++ +C + ++ A ++F +R R P+V T+++LI+G C++G
Sbjct: 331 SMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLG 390
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I AL+L+ D P++V YS
Sbjct: 391 RIFYALKLVDEMHDR---GQPPNIVTYS 415
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L ++ K + PN V N++ID C +N AF +++ + + PDVFT+ L
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GF + ++ A+ L + + + + P+V ++
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKE---NINPNVYTFN 275
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 51/79 (64%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M HY T ISL Q+Q KGI P+ T ILI+CY H FAFS+ ATI K GYQP++ T
Sbjct: 68 MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127
Query: 61 FATLINGFCQMGQIRPALQ 79
F T+INGFC G I AL
Sbjct: 128 FNTIINGFCINGMIFKALD 146
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG+ PN VT N ++D YC +N A +F + K G +PD+ + LING+C+
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + L+ PD+ Y+
Sbjct: 491 VDEAIVLFKEMRHKNLI---PDIASYN 514
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ V L +M + + P+ T NILID C G+I A V A + KRG +PD+ T+
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
L+ G+C + A +L R +V+ L+PDV+ Y+
Sbjct: 306 LMEGYCSRENVHEARELFNR-----MVKRGLEPDVLNYN 339
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G P+ VT N L++ YC ++ A +F + KRG +PDV + LI+G+C+
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + + LV P + Y+
Sbjct: 351 VDEAMVLFKELCNKNLV---PTIASYN 374
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M G+ P+ + N+LI+ YC ++ A +F +R + PD+ ++ +LI+G C +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+I +LL D PDV+ Y+
Sbjct: 524 GRIPHVQELLDEMCDS---GQSPDVITYN 549
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M P+ VT NILID C G+I A V + K+G +P++ T+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G+C + A + R L+PD++ Y+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKS---GLEPDILNYN 479
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ ISL Q+ ++GI P+F T++ ++D C ++ A + G P+V T+
Sbjct: 561 FDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LIN C+ G A+ LL + ED++ PD + +
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDND---RPPDAITFE 653
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L Q+ +GI+ + VT N LID C +G+ + + + PD +TF L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 65 INGFCQMGQIRPALQLL----RRAEDDELVQLKPDVVIYS 100
I+ C+ G+I A +L +R E KPD+V Y+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGE-------KPDIVTYN 304
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M +G+ P+ + N+LID YC ++ A +F + + P + ++ +LI+G
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 69 CQMGQIRPALQLLRRAEDDEL--VQLKPDVVIYS 100
C G+I +LL DE+ PDVV Y+
Sbjct: 381 CNSGRISHVKKLL-----DEMHGSAQPPDVVTYN 409
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L +M+ K ++P+ + N LID C+LG+I + + G PDV T+ L++
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 67 GFCQMGQIRPALQLLRR 83
FC+ A+ L R+
Sbjct: 554 AFCKTQPFDKAISLFRQ 570
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L +M+ + PN V + LID C G ++ A + + I +RG D T+ +LI
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 66 NGFCQMGQIRPALQLLRR 83
+G C +G+ + QLL +
Sbjct: 238 DGCCSVGRWQEVTQLLTK 255
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 38/133 (28%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT-- 60
HYSTV+SL QM+ GI + V +ILI+C+ LGQ +FSV A I K GY+P+V T
Sbjct: 87 HYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLT 146
Query: 61 ---------------------------------FATLINGFCQMGQIRPALQLLRRAEDD 87
+ TLING C++GQ ALQLLRR D
Sbjct: 147 TLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRV-DG 205
Query: 88 ELVQLKPDVVIYS 100
+LVQ P+VV+Y+
Sbjct: 206 KLVQ--PNVVMYN 216
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ T N L+D YC + ++N A +F TI +RG P++ +++ +I+GFC++ +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + + ++ PDVV Y+
Sbjct: 368 VDEAMNLFKEMHCNNII---PDVVTYN 391
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M I+P+ VT N LID C LG+I++A + + RG D T
Sbjct: 365 IKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT 424
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ Q+ A+ LL + +D+ ++PD+ Y+
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDE---GIQPDICTYT 461
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L ++ K + PN V N +ID C + +N AF +++ + +G PDV T+ L
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNAL 253
Query: 65 INGFCQMGQIRPALQLLRR 83
I+GFC +G+++ A L +
Sbjct: 254 ISGFCIVGKMKDATDLFNK 272
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M KGI P+ VT N LI +C +G++ A +F + P+V+T
Sbjct: 225 VKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYT 284
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F L++GFC+ +++ A +L +KPDV Y+
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQ---GIKPDVFTYN 321
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +M+ +GI P+ T L+D C G++ A VF + +GY DV + +I G
Sbjct: 442 IALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G +L LL + E++ + P+ V Y
Sbjct: 502 FCSHGLFDESLDLLSKMEENGCI---PNAVTYE 531
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ PN + +I+I +C + +++ A ++F + PDV T+ +LI+G C++G+I
Sbjct: 346 RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY 405
Query: 77 ALQLLRRAED 86
AL+L+ D
Sbjct: 406 ALKLVDEMHD 415
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M + I PN T NIL+D +C ++ A +V A + K+G +PDVFT+ +L++ +
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 69 CQMGQIRPA 77
C + ++ A
Sbjct: 328 CLVKEVNKA 336
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G+ + +T N ++D C Q++ A ++ ++ G QPD+ T+ TL
Sbjct: 404 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTL 463
Query: 65 INGFCQMGQIRPA 77
++G C+ G++ A
Sbjct: 464 VDGLCKNGRLEDA 476
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 51/79 (64%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M HY T ISL Q+Q KGI P+ T ILI+CY H FAFS+ ATI K GYQP++ T
Sbjct: 68 MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127
Query: 61 FATLINGFCQMGQIRPALQ 79
F T+INGFC G I AL
Sbjct: 128 FNTIINGFCINGMIFKALD 146
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG+ PN VT N ++D YC +N A +F + K G +PD+ + LING+C+
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + L+ PD+ Y+
Sbjct: 491 VDEAIVLFKEMRHKNLI---PDIASYN 514
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ V L +M + + P+ T NILID C G+I A V A + KRG +PD+ T+
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
L+ G+C + A +L R +V+ L+PDV+ Y+
Sbjct: 305 ALMEGYCSRENVHEARELFNR-----MVKRGLEPDVLNYN 339
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M G+ P+ + N+LI+ YC ++ A +F +R + PD+ ++ +LI+G C +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+I +LL D PDV+ Y+
Sbjct: 524 GRIPHVQELLDEMCDS---GQSPDVITYN 549
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G P+ VT N L++ YC ++ A +F + KRG +PDV + LI+G+C+
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + + LV P + Y+
Sbjct: 351 VDEAMVLFKELCNKNLV---PTIASYN 374
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M P+ VT NILID C G+I A V + K+G +P++ T+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G+C + A + R L+PD++ Y+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKS---GLEPDILNYN 479
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ ISL Q+ ++GI P+F T++ ++D C ++ A + G P+V T+
Sbjct: 561 FDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LIN C+ G A+ LL + ED++ PD + +
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDND---RPPDAITFE 653
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L Q+ +GI+ + VT N LID C +G+ + + + PD +TF L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 65 INGFCQMGQIRPALQLL----RRAEDDELVQLKPDVVIYS 100
I+ C+ G+I A +L +R E KPD+V Y+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGE-------KPDIVTYN 304
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M +G+ P+ + N+LID YC ++ A +F + + P + ++ +LI+G
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 69 CQMGQIRPALQLLRRAEDDEL--VQLKPDVVIYS 100
C G+I +LL DE+ PDVV Y+
Sbjct: 381 CNSGRISHVKKLL-----DEMHGSAQPPDVVTYN 409
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L +M+ K ++P+ + N LID C+LG+I + + G PDV T+ L++
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 67 GFCQMGQIRPALQLLRR 83
FC+ A+ L R+
Sbjct: 554 AFCKTQPFDKAISLFRQ 570
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ L +M+ + PN V + LID C G ++ A + + I +RG D T+ +L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236
Query: 65 INGFCQMGQIRPALQLLRR 83
I+G C +G+ + QLL +
Sbjct: 237 IDGCCSVGRWQEVTQLLTK 255
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 38/134 (28%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH+ST +SL QM+L GI+ +F T NILI+C+ LG + +FSVF I K+G+ P+ TF
Sbjct: 84 KHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITF 143
Query: 62 -----------------------------------ATLINGFCQMGQIRPALQLLRRAED 86
TLING C++G+I ALQLL+R D
Sbjct: 144 NTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV-D 202
Query: 87 DELVQLKPDVVIYS 100
+LVQ P+ V+Y+
Sbjct: 203 GKLVQ--PNAVMYN 214
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L ++ +GI P+ T +LI C G++ A VF + +GY DV+T+
Sbjct: 435 HVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYT 494
Query: 63 TLINGFCQMGQIRPALQLLRRAEDD 87
+I GFC G AL LL + ED+
Sbjct: 495 VMIQGFCVKGLFDAALALLSKMEDN 519
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V+ L +M +G PN +T N ++D C ++ A ++ ++ +G +PD++T+ L
Sbjct: 402 SCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVL 461
Query: 65 INGFCQMGQIRPA 77
I G CQ G++ A
Sbjct: 462 IKGLCQSGKLEDA 474
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M+ + I+PN VT N LID LG+I+ + + RG P++ T
Sbjct: 363 IKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIIT 422
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ + A+ LL +D ++PD+ Y+
Sbjct: 423 YNSILDALCKNHHVDKAIALLTNLKDQ---GIRPDMYTYT 459
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L ++ K + PN V N++ID C +N AF +++ + + PD FT +L
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL 251
Query: 65 INGFCQMGQIRPALQLLRR 83
I GFC MGQ++ A+ LL +
Sbjct: 252 IYGFCIMGQLKEAVGLLHK 270
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K I+ + VT N L+D YC + +IN A +F ++ RG +V ++ T+ING C++ +
Sbjct: 309 KDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDE 368
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L +++ P+VV Y+
Sbjct: 369 AVNLFEEMRCRKII---PNVVTYN 389
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + L H+M L+ I P T +IL+D +C G++ A + K+ DV T
Sbjct: 258 MGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVT 317
Query: 61 FATLINGFCQMGQIRPA 77
+ +L++G+C + +I A
Sbjct: 318 YNSLMDGYCLVKEINKA 334
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L QM K I P+ T N LI +C +GQ+ A + + P ++TF+ L++ FC
Sbjct: 232 LYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFC 291
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A +L +++ DVV Y+
Sbjct: 292 KEGKVKEAKMMLGVTMKKDIIL---DVVTYN 319
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MKH ISL QM KG+ P+ T +I I+CYCHLG++ FAFSV + KRGYQP+ T
Sbjct: 54 MKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNIT 113
Query: 61 FATLINGFCQMGQIRPALQ 79
T++ G C G+++ A+
Sbjct: 114 LTTVMKGLCINGEVQKAMD 132
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ V L +M K I PN T N+LID +C G++ A +F + KRG QPD+ TF
Sbjct: 231 QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 290
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+G C G + A +L + ++ PDV Y+
Sbjct: 291 TLISGHCLHGNVLEARKLFDTVFERGIL---PDVWSYT 325
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN +T NILID +C + I+ +F + +G P V T+ LING+C+ +IR A
Sbjct: 386 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 445
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ LL + L PD + Y+
Sbjct: 446 MNLLSVMQSKNLA---PDSITYN 465
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K +SL ++M+ K ++ + V + LID C G+I++A+ +F+TI G P+V T+
Sbjct: 335 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 394
Query: 62 ATLINGFCQMGQIRPALQLLR 82
LI+ FC++ I ++L +
Sbjct: 395 NILIDAFCKIQDIDMGIELFK 415
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M KG+ P +T NILI+ YC +I A ++ + ++ + PD T+ +L +G
Sbjct: 411 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 470
Query: 68 FCQMGQIRPALQLLR 82
C+ G+I A +L +
Sbjct: 471 LCKSGRISDAWELFK 485
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G P+ VT N LI +C G + A +F T+ +RG PDV+++ LI G+C+ +
Sbjct: 277 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 336
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I A+ L +V D+V+YS
Sbjct: 337 IDEAVSLFNEMRCKNMVL---DIVLYS 360
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ + + PN V N++ID +C A ++ I G PD+ T+ +LI GFC
Sbjct: 168 LLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFC 227
Query: 70 QMGQIRPALQLL 81
+ GQ QL+
Sbjct: 228 RTGQWGEVKQLM 239
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MKH ISL QM KG+ P+ T +I I+CYCHLG++ FAFSV + KRGYQP+ T
Sbjct: 70 MKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNIT 129
Query: 61 FATLINGFCQMGQIRPALQ 79
T++ G C G+++ A+
Sbjct: 130 LTTVMKGLCINGEVQKAMD 148
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ V L +M K I PN T N+LID +C G++ A +F + KRG QPD+ TF
Sbjct: 247 QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 306
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+G C G + A +L + ++ PDV Y+
Sbjct: 307 TLISGHCLHGNVLEARKLFDTVFERGIL---PDVWSYT 341
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN +T NILID +C + I+ +F + +G P V T+ LING+C+ +IR A
Sbjct: 402 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 461
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ LL + L PD + Y+
Sbjct: 462 MNLLSVMQSKNLA---PDSITYN 481
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K +SL ++M+ K ++ + V + LID C G+I++A+ +F+TI G P+V T+
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 410
Query: 62 ATLINGFCQMGQIRPALQLLR 82
LI+ FC++ I ++L +
Sbjct: 411 NILIDAFCKIQDIDMGIELFK 431
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M KG+ P +T NILI+ YC +I A ++ + ++ + PD T+ +L +G
Sbjct: 427 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 486
Query: 68 FCQMGQIRPALQLLR 82
C+ G+I A +L +
Sbjct: 487 LCKSGRISDAWELFK 501
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G P+ VT N LI +C G + A +F T+ +RG PDV+++ LI G+C+ +
Sbjct: 293 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 352
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I A+ L +V D+V+YS
Sbjct: 353 IDEAVSLFNEMRCKNMVL---DIVLYS 376
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ + + PN V N++ID +C A ++ I G PD+ T+ +LI GFC
Sbjct: 184 LLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFC 243
Query: 70 QMGQIRPALQLL 81
+ GQ QL+
Sbjct: 244 RTGQWGEVKQLM 255
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MKH ISL QM KG+ P+ T +I I+CYCHLG++ FAFSV + KRGYQP+ T
Sbjct: 70 MKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNIT 129
Query: 61 FATLINGFCQMGQIRPALQ 79
T++ G C G+++ A+
Sbjct: 130 LTTVMKGLCINGEVQKAMD 148
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ V L +M K I PN T N+LID +C G++ A +F + KRG QPD+ TF
Sbjct: 247 QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 306
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+G C G + A +L + ++ PDV Y+
Sbjct: 307 TLISGHCLHGNVLEARKLFDTVFERGIL---PDVWSYT 341
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN +T NILID +C + I+ +F + +G P V T+ LING+C+ +IR A
Sbjct: 402 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 461
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ LL + L PD + Y+
Sbjct: 462 MNLLSVMQSKNLA---PDSITYN 481
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K +SL ++M+ K ++ + V + LID C G+I++A+ +F+TI G P+V T+
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 410
Query: 62 ATLINGFCQMGQIRPALQLLR 82
LI+ FC++ I ++L +
Sbjct: 411 NILIDAFCKIQDIDMGIELFK 431
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M KG+ P +T NILI+ YC +I A ++ + ++ + PD T+ +L +G
Sbjct: 427 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 486
Query: 68 FCQMGQIRPALQLLR 82
C+ G+I A +L +
Sbjct: 487 LCKSGRISDAWELFK 501
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G P+ VT N LI +C G + A +F T+ +RG PDV+++ LI G+C+ +
Sbjct: 293 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 352
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I A+ L +V D+V+YS
Sbjct: 353 IDEAVSLFNEMRCKNMVL---DIVLYS 376
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ + + PN V N++ID +C A ++ I G PD+ T+ +LI GFC
Sbjct: 184 LLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFC 243
Query: 70 QMGQIRPALQLL 81
+ GQ QL+
Sbjct: 244 RTGQWGEVKQLM 255
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 49/78 (62%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY V+SLS +M+ +GI + V +ILI+ +C LG FAFSV A I K GY+PD TF
Sbjct: 80 KHYHNVVSLSQKMEFEGIKLDLVNCSILINSFCQLGHNPFAFSVLAKILKNGYEPDTITF 139
Query: 62 ATLINGFCQMGQIRPALQ 79
TLI G C G I AL
Sbjct: 140 TTLIKGLCLKGDIHQALH 157
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 82.8 bits (203), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY TV+ LS +M+ +GI PN V NILI+ +C LG I AFSV I K GY+P+ T
Sbjct: 76 KHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITL 135
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDE-------LVQLKPDVVIYS 100
TLI G C G+I ++ + +D L + PDV ++
Sbjct: 136 NTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M ++GI P VT N L+D Y + Q+N A S+F T+ + G PD+ +++ LINGFC++
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++LL+ +++ P+VV YS
Sbjct: 263 MDEAMELLKEMHHKQII---PNVVTYS 286
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
I+L QM+ +GI PN T ILI C G++ A VF + +G+ +V+T+ +I
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394
Query: 66 NGFCQMGQIRPALQLLRRAEDD 87
GFC G AL LL + ED+
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDN 416
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I+PN VT + LID C G+I++A + + RG P++ T
Sbjct: 260 IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVT 319
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ Q+ A+ LL + ++ ++P++ Y+
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQ---GIQPNMYTYT 356
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G PN VT + ++D C Q++ A ++ ++ +G QP+++T+ L
Sbjct: 299 SYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTIL 358
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
I G CQ G++ A R+ +D LV+
Sbjct: 359 IKGLCQSGKLEDA----RKVFEDLLVK 381
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + +ILI+ +C + ++ A + + + P+V T
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++LI+G C+ G+I AL+L+ D P++V YS
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDR---GQPPNIVTYS 321
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 38/122 (31%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT------------- 60
M+ KGI P+FV+ NILI+C+C LG I+FAFS+ A I K GY+PD T
Sbjct: 1 MEFKGIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQ 60
Query: 61 ----------------------FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVI 98
+ TLING ++G+ + AL+LLRR D +LVQL + V+
Sbjct: 61 IHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRV-DGKLVQL--NAVM 117
Query: 99 YS 100
Y+
Sbjct: 118 YN 119
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I PN T N L+D YC + ++N A S+F T+ + G PD+ ++ LINGFC+
Sbjct: 183 MMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKM 242
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A+ L +L+ PDVV Y+
Sbjct: 243 TDEAMNLFEEMHCRKLI---PDVVTYN 266
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M + ++P+ VT N LID C LG+ ++A + + RG P++ T+
Sbjct: 241 KMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITY 300
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDD 87
++++N C+ Q+ A+ LL + +D+
Sbjct: 301 SSILNALCKNHQVDKAITLLTKIKDE 326
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + NILI+ +C + A ++F + R PDV T
Sbjct: 205 VKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVT 264
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C++G+ AL+L+ D P+++ YS
Sbjct: 265 YNSLIDGLCKLGKFSYALKLVDEMHDR---GQPPNIITYS 301
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYC-------HLGQINFAFSVFATIRKRGY 54
KH + L +M K I P VT + LI +C +G++ A +VFA + K+
Sbjct: 129 KHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDI 188
Query: 55 QPDVFTFATLINGFCQMGQIRPA 77
+P+VFT+ +L++G+C + ++ A
Sbjct: 189 KPNVFTYNSLMDGYCLVKEVNKA 211
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ K + N V N +ID C +N AF +++ + + P V T++ LI G
Sbjct: 100 LELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIG 159
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDV 96
FC +G+++ A+ ++ A++ + +K D+
Sbjct: 160 FCIVGKLKDAIGRVKEAKNVFAMMMKQDI 188
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+L+GI + V S+ILI+C+CHLG +N+AFSV I K G++PD T T++ G C GQ
Sbjct: 1 MELRGIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQ 60
Query: 74 IRPALQ 79
+R AL
Sbjct: 61 VRKALH 66
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T IL+D C G++ A V+ + +GY DV ++ ++NG
Sbjct: 323 ITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNG 382
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G AL L+ + ED+ P+ V Y
Sbjct: 383 LCKEGLFDDALSLVSKMEDNSCT---PNAVTYE 412
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L ++Q+K + P+ +T N LID C G+I+ + + + G DV T+
Sbjct: 247 KMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITY 306
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ C+ Q+ A+ LL + +D ++P++ Y+
Sbjct: 307 NSLLDALCKNHQVDKAITLLTKIKDQ---GIQPNMYTYT 342
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ + L +QM LK I + T N L+D C G++ A +V A + K+G PD+FT+
Sbjct: 143 QFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYI 202
Query: 63 TLINGFCQMGQIRPA 77
+L++G+ + ++ A
Sbjct: 203 SLMDGYFLVKEVNKA 217
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M G + +T N L+D C Q++ A ++ I+ +G QP+++T+ L
Sbjct: 285 SDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTIL 344
Query: 65 INGFCQMGQIRPA 77
++G C+ G+++ A
Sbjct: 345 VDGLCKNGRLKDA 357
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ T L+D Y + ++N A VF TI + G P V +++ +ING C+ +
Sbjct: 192 QGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDE 251
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + ++ + PD + Y+
Sbjct: 252 AVNLFKEL---QIKNMAPDTITYN 272
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M +K I P+ VT LI +C +GQ A + + + DV TF TL++G
Sbjct: 114 ALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGL 173
Query: 69 CQMGQIRPALQLL 81
C+ G+++ A +L
Sbjct: 174 CKEGEVKQARNVL 186
>Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30131763-30132528 | 20130731
Length = 175
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+L+GI + V +ILI+C+CHL Q+N+AFSV A I K GYQPD T TL+ G C GQ
Sbjct: 1 MELQGIQTDVVNLSILINCFCHLHQLNYAFSVLAKIFKFGYQPDTITMTTLMKGLCLSGQ 60
Query: 74 IRPALQ 79
+R AL
Sbjct: 61 VRKALH 66
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ Y TVISLS +++++ P+ T NILI+CYCH+ Q+ FAFS+FA I K G++ D T
Sbjct: 73 LNQYPTVISLSKKLEIR---PDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAIT 129
Query: 61 FATLINGFCQMGQIRPALQ 79
TL+ G C G+++ +L
Sbjct: 130 LTTLMKGLCLNGKVKESLH 148
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +QM LK I P+ T NIL+D C G+I A +V A + K G +PDV T+ +L++G+C
Sbjct: 254 LFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYC 313
Query: 70 QMGQIRPALQLLR 82
+ ++ A +L
Sbjct: 314 LVKEVYEAKHVLN 326
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I L +++ +GI + T +ILID C G++ A +F + +GY +V T++
Sbjct: 415 HVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYS 474
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ING C G A LL + ED+ + PD V Y
Sbjct: 475 IMINGLCSKGLFDEATTLLSKMEDNGCI---PDAVTYE 509
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +M K I PN +T N LI +C +GQ+ AF +F + + PD++TF
Sbjct: 211 KFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTF 270
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C+ G+I+ A ++ + ++PDVV Y+
Sbjct: 271 NILVDVLCKEGKIKEAKNVIAVMMKE---GVEPDVVTYN 306
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL ++M+ KGI P+ VT N LID C +I A+ + G ++FT
Sbjct: 343 IKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFT 402
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+ C+ + A+ L+++ +D ++ D+ YS
Sbjct: 403 YNSLIDALCKNHHVDKAIVLVKKIKDQ---GIQSDMYTYS 439
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI N T N LID C ++ A + I+ +G Q D++T++ LI+G C+ G
Sbjct: 390 EMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQG 449
Query: 73 QIRPA 77
+++ A
Sbjct: 450 RLKDA 454
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 38/121 (31%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDV--------------- 58
M+ GI P+ V NIL +C+C LG I F+FSV A I K GY+PD
Sbjct: 1 MEFLGIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGD 60
Query: 59 --------------------FTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVI 98
F++ TLIN C+ G+ + AL+LLRR D +LVQ PDVV
Sbjct: 61 IHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLRRV-DGKLVQ--PDVVK 117
Query: 99 Y 99
Y
Sbjct: 118 Y 118
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PNFVT N L+D YC L ++N A S+F T+ + G P + ++ LINGFC++ ++ A
Sbjct: 164 GFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEA 223
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ L +L+ PDVV Y+
Sbjct: 224 INLFEEMHCRKLI---PDVVTYN 243
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M +G+ P + NILI+ +C + +++ A ++F + R PDV T
Sbjct: 182 LKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVT 241
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +LI+G C+ G+I AL+L+ D
Sbjct: 242 YNSLIDGLCKSGKISYALKLVDEMHD 267
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 40/126 (31%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT------------- 60
M+L G + N VT +ILI+ + LGQ +FSV A I K+GY PD T
Sbjct: 1 MELNGFVSNLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQ 60
Query: 61 ----------------------FATLINGFCQMGQIRPALQLLRRAEDDELVQ----LKP 94
+ TLING C++GQ R ALQLLRR D +LVQ + P
Sbjct: 61 IHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRV-DGKLVQPDVGISP 119
Query: 95 DVVIYS 100
+VV YS
Sbjct: 120 EVVTYS 125
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M + I+PN VT N LID C G+I++A + + RG PD+ T
Sbjct: 209 IKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 268
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++L++ C+ + A+ LL + +D L+P++ Y+
Sbjct: 269 YSSLLDALCKNHHVDKAIALLTKLKDQ---GLQPNMYTYT 305
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN VT + L+D YC + ++N A S+F + + G PD+ ++ LINGFC++
Sbjct: 152 MMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKM 211
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A+ L E+ ++ P+VV Y+
Sbjct: 212 TDAAMNLF---EEMHCRKIIPNVVTYN 235
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + NILI+ +C + + A ++F + R P+V T
Sbjct: 174 VKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVT 233
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C+ G+I AL+L+ D PD++ YS
Sbjct: 234 YNSLIDGLCKSGKISYALKLVDEMHDR---GQPPDIITYS 270
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +G+ PN T ILI+ C G+ A ++F + +GY +V T+
Sbjct: 281 HVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYT 340
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I+ FC G AL +L + E++ + P+ V Y
Sbjct: 341 VMIHVFCNNGMFGEALAMLSKMEENGCI---PNAVTYE 375
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 18 GIMPNFVTSNILIDCYCHL-----GQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
GI P VT + LI +C L G++ A +VFA + K+G++P+V T+++L++G+C +
Sbjct: 116 GISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVK 175
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A + + PD+ Y+
Sbjct: 176 EVNKAKSIFNNMAQG---GVNPDIQSYN 200
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G P+ +T + L+D C ++ A ++ ++ +G QP+++T+ L
Sbjct: 248 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTIL 307
Query: 65 INGFCQMGQIRPA 77
ING C+ G+ A
Sbjct: 308 INGLCKGGRPEDA 320
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MKHYSTVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVF 59
MKHY+T ISL +M GI P+ N++I+ CHL + F FSV T+ K G +P V
Sbjct: 104 MKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVV 163
Query: 60 TFATLINGFCQMGQIRPALQLLRRAE 85
TF LING C G + A++L+ E
Sbjct: 164 TFTILINGLCVKGDVGRAVELVDHVE 189
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M L G +P+ T N LID YC Q++ A VF + RG PD+ + +LI+G+C++
Sbjct: 328 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 387
Query: 74 IRPALQLLRRAEDDELVQL--KPDVVIYS 100
I A+ LL DE++++ PDVV ++
Sbjct: 388 INKAMHLL-----DEMIKVGFTPDVVTWT 411
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S +SL H M+ + N V +I++D C G++N A +F+ + +G Q +V+ + +
Sbjct: 459 SEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIM 518
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
INGF + G + A LL E++ + PD Y+
Sbjct: 519 INGFAKQGLLDKAEDLLSNMEENGCM---PDSCTYN 551
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G +P+ V LI +C + IN A + + K G+ PDV T+ TLI GFCQ+G+
Sbjct: 363 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 422
Query: 74 IRPALQL 80
A +L
Sbjct: 423 PLAAKEL 429
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M G+MP+ + NIL+D C G+I A SV + G PDVFT+ +LI+ +
Sbjct: 288 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 347
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C Q+ A ++ + PD+V Y+
Sbjct: 348 CLQNQMDEATRVFELMVSRGCL---PDIVAYT 376
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ +GI P+ VT NILI+ YCHL Q+ FAFS+F I K GY P++ T TL+ C G
Sbjct: 1 MEFQGIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGD 60
Query: 74 IRPALQ 79
++ AL
Sbjct: 61 VQKALH 66
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M ++G+ PN VT + L+D YC L +N A F T+ G DV + +INGFC+
Sbjct: 102 MMIQGMKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKM 161
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L ++ P +V Y+
Sbjct: 162 MDEALDLFEEMYSKNII---PTIVTYN 185
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +M K I+P VT N +ID C G+I++A+ + +R G D T+
Sbjct: 160 KMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITY 219
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
+ ++ FC+ Q+ A+ L++ +
Sbjct: 220 NSFLHTFCKNHQLDKAIALVKEIHN 244
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+S QM G++ N V+ N+LIDC+C + ++ A VF+ ++ RG+ P++ TF TLING C
Sbjct: 403 ISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHC 462
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G I A +LL ++ +LKPD+ +S
Sbjct: 463 KDGAIIKARELLEMLLEN---RLKPDIFTFS 490
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M S V S +MQL+G PN VT N LI+ +C G I A + + + +PD+FT
Sbjct: 432 MDKASEVFS---EMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFT 488
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
F+ +I+G C++ + A + +E+V+ + P+ +IY+
Sbjct: 489 FSCIIDGLCRLKRTEEAFECF-----NEMVEWGVNPNAIIYN 525
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +MQ +GI P+ + N LI +C + ++ A +F ++ K G+ PD +T++ I
Sbjct: 541 VKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAA 600
Query: 68 FCQMGQIRPALQLLRRAE 85
+ G++ A ++ E
Sbjct: 601 LSESGRLEEAKKMFYSME 618
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++M G+ PN + NILI C +G+ + + +++ G PD+++
Sbjct: 499 LKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYS 558
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LI FC+M ++ A +L PD YS
Sbjct: 559 YNALIQIFCRMNKVEKAKKLFDSMSKS---GFNPDNYTYS 595
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
QM P+ +T N+LI C +G ++ A + ++ +G P+VFT+ LI+GFC
Sbjct: 193 QQMVGDHCFPDRITYNVLIHGVCKIGVVDEALRLIRQMKDKGLFPNVFTYTILIDGFCNA 252
Query: 72 GQIRPALQLL 81
++ A +L
Sbjct: 253 KRVDEAFGVL 262
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 23/118 (19%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCY--------------------CHLGQINFA 42
HY TV+SLS QM+ KG+ P+ T +ILI+CY C G++N A
Sbjct: 186 HYPTVLSLSTQMESKGVKPDLFTLSILINCYYFKMGYEPNTITLTTLIKGLCLNGKVNEA 245
Query: 43 FSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+ + T+ LING C+MGQ R ALQ+LR+ E +LV +VV+YS
Sbjct: 246 LLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE-GKLVN--TNVVMYS 300
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L + + +GI P+ T N L+D C G++ A +F + +GY +T+
Sbjct: 445 HVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYN 504
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ING C G + A LL + ED+ + PDVV Y
Sbjct: 505 IMINGLCLEGLLDEAETLLSKMEDNGCI---PDVVTY 538
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY--------QPDVFT 60
SL H+M LK I PN T NIL+D C G+I A +V + +P+ +
Sbjct: 338 SLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVS 397
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TLI+GFC+ G++ A +LL + D P+V+ Y+
Sbjct: 398 YNTLIDGFCKSGRLSHAWKLLDQMRDR---GQPPNVITYN 434
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K PN V+ N LID +C G+++ A+ + +R RG P+V T
Sbjct: 376 IKMVDEALNLFTEMHCK---PNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVIT 432
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +L++ C+ + A+ L+ +D ++PD+ Y+
Sbjct: 433 YNSLLHALCKNHHVDKAIALVNNFKDQ---GIQPDMHTYN 469
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L QM+ +G PN +T N L+ C ++ A ++ + +G QPD+ T+ TL
Sbjct: 412 SHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTL 471
Query: 65 INGFCQMGQIRPA 77
++G C+ G+++ A
Sbjct: 472 VDGLCKQGRLKDA 484
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K++ +V++ M+L + PNF T NIL++C+ + N AFS+FA + K GY+P++ TF
Sbjct: 69 KNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAFSMFAKLLKLGYEPNIITF 128
Query: 62 ATLINGFCQMGQIRPALQL 80
+L+ C G+++ AL L
Sbjct: 129 NSLLKAMCFNGEVQMALDL 147
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ + +IDC C ++ A ++ + + G PDVFT+ TLI+G C + A +
Sbjct: 192 PDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEF 251
Query: 81 LRRAEDDELVQLKPDVVIYS 100
+ +E + P V YS
Sbjct: 252 FKEMVSNE---INPTVYTYS 268
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 70.1 bits (170), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K+Y+T ISL I + T NI+I+C CHLG FAFSV + + K G +P V T
Sbjct: 86 KNYTTTISLIKHAHSFNINADTYTLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTL 145
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
T++NG C G + A+ L R E+
Sbjct: 146 NTIVNGLCVEGNVARAVCLTREMEN 170
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M KG+MP+ T IL+D +C G I A SV + + + G +P+V T+ +LI G+C
Sbjct: 269 LLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYC 328
Query: 70 QMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
M +I A+++ R L+ LK P VV Y+
Sbjct: 329 LMNEIDEAIKVFR------LMVLKKCLPSVVTYN 356
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S +SL +M KG+ + VT N LI C +G+ A+ + + ++G PDV TF L
Sbjct: 229 SEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTIL 288
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++GFC+ G I A ++ +VQ+ +P+VV Y+
Sbjct: 289 VDGFCKEGLILEAKSVI-----SFMVQMGVEPNVVTYN 321
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+VIS QM G+ PN VT N LI YC + +I+ A VF + + P V T+ +LI
Sbjct: 303 SVISFMVQM---GVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLI 359
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+G+C++ + A+ LL +E+V L PDVV ++
Sbjct: 360 HGWCKVKDVDKAMCLL-----NEMVNEGLYPDVVTWT 391
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M I + M LK +P+ VT N LI +C + ++ A + + G PDV T
Sbjct: 330 MNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVT 389
Query: 61 FATLINGFCQMGQIRPALQLL 81
+ TL++GFC++G+ A +L
Sbjct: 390 WTTLVSGFCEVGKPLAAKELF 410
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 69.7 bits (169), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ +QM KG+ PN VT L D C G+I+ A + + ++G QP+V+T+ T++NG
Sbjct: 438 SVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++G I ++L+ E+ +L PD + Y+
Sbjct: 498 CKIGNIEQTVKLM---EEMDLAGFYPDTITYT 526
Score = 60.1 bits (144), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M +KG+ P+ VT LID YC G++ AFSV + ++G P+V T+ L +G C+
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+I A +LL L+P+V Y+
Sbjct: 466 GEIDVANELLHEMSRK---GLQPNVYTYN 491
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M KG+ PN T N +++ C +G I + + G+ PD T+ TL++ +C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+MG++ A +LLR + +L+P +V ++
Sbjct: 534 KMGEMAKAHELLRIMLNK---RLQPTLVTFN 561
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M L G P+ +T L+D YC +G++ A + + + QP + TF L+NG
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566
Query: 68 FCQMGQIRPALQLL 81
FC G + +L+
Sbjct: 567 FCMSGMLEDGERLI 580
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L +M+ K I+P+ VT +I C G++ A +F + +G +PD T+ L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
I+G+C+ G+++ A + +++VQ L P+VV Y+
Sbjct: 424 IDGYCKAGEMKEAFSV-----HNQMVQKGLTPNVVTYT 456
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G+ P+ V +I +C LG ++ A +F +R++ PD+ T+ ++I+G C+ G+
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 74 IRPALQLLRRAEDDELVQ-LKPDVVIYS 100
+ A ++ ++ LV+ L+PD V Y+
Sbjct: 398 MVEAREMF----NEMLVKGLEPDEVTYT 421
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V+ L +++ KG+ P+ N +I C G++ A + +RK G PD + T+I+
Sbjct: 296 VLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVIS 355
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC++G + A +L ++V PD+V Y+
Sbjct: 356 GFCKLGNVSAACKLFDEMRRKKIV---PDIVTYT 386
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV ++ M +GI+P+ VT N L+D YC + ++N A S+F T+ + G PD+ +
Sbjct: 289 MKEGKTVFAM---MMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRS 345
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LINGFC++ ++ A+ L ++ P+VV Y+
Sbjct: 346 YNILINGFCKIKKVDKAMNLFNEMHCKNII---PNVVTYN 382
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN +T N LI C GQI+ AF + G+ D ++ TLI+G C++G+ R A
Sbjct: 128 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 187
Query: 78 LQLLRRAEDDELVQLKP---DVVIY 99
L LL+R D +LVQL + VIY
Sbjct: 188 LDLLQRV-DGKLVQLNAVMYNTVIY 211
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +T S+ + M G+ P+ + NILI+ +C + +++ A ++F + + P+V T
Sbjct: 321 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVT 380
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G + G+I ALQL+ + D + P+++ Y+
Sbjct: 381 YNSLIDGLSKSGRISYALQLVDQMHDR---GVPPNILTYN 417
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L ++M K I+PN VT N LID G+I++A + + RG P++ T
Sbjct: 356 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 415
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ ++I+ + Q+ A+ L+ + +D
Sbjct: 416 YNSIIDALFKTHQVDKAIALITKFKD 441
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M KGI PN VT + LI + +G++ A +F I +PD +TF
Sbjct: 217 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 276
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++GFC+ +++ + ++ PDVV Y+
Sbjct: 277 NILVDGFCKDRKMKEGKTVFAMMMKQGII---PDVVTYN 312
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L +++ L+ I P+ T NIL+D +C ++ +VFA + K+G PDV T+ +L++
Sbjct: 257 AIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMD 316
Query: 67 GFCQMGQIRPA 77
G+C + ++ A
Sbjct: 317 GYCLVKEVNTA 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L QM +G+ PN +T N +ID Q++ A ++ + +G QP ++T+ L
Sbjct: 395 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 454
Query: 65 IN--------------------GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
I+ GFC+ G AL LL + +D + P+ V Y
Sbjct: 455 IDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCI---PNAVTY 506
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M+ G+ N VT N +ID YC +G + A V + + +R +P+V TF+TLI+GF
Sbjct: 319 NLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGF 378
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G ++ A+ L LV PDVV Y+
Sbjct: 379 CKKGNMKAAMGLYIEMVIKGLV---PDVVTYT 407
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S + +M +GI+PN V LI +C+ G ++ A +R+ G +P+++T+ T
Sbjct: 139 FSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVT 198
Query: 64 LINGFCQMGQIRPALQ----LLRRAEDDELVQLKPDVVIYS 100
LI+G+C+ G ++ + +LR L PDVV ++
Sbjct: 199 LIDGYCKTGNVKRVFEIYSDMLRNG-------LHPDVVTFA 232
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + +V S+ + + +G++P +T IL++C C+ G + A VF + +RG P+V +
Sbjct: 102 KKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVY 161
Query: 62 ATLINGFCQMGQIRPALQLLR 82
TLI FC G + A + L+
Sbjct: 162 TTLIRVFCNEGDMDEAERFLK 182
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G+ PN T LID YC G + F +++ + + G PDV TFA L++ C++G
Sbjct: 184 MRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGD 243
Query: 74 IRPA 77
+ A
Sbjct: 244 LEAA 247
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M I + QM + I PN +T + LID +C G + A ++ + +G PDV T
Sbjct: 346 MGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVT 405
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVV 97
+ LI+G C++ + A +L + + L P+VV
Sbjct: 406 YTALIDGHCKVENSKVAFELHKEMME---AGLTPNVV 439
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V + M G+ P+ VT IL+D C +G + A + F + K G P+++ + LI+
Sbjct: 212 VFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLID 271
Query: 67 GFCQMGQIRPALQLLRRAE 85
G+C+ G + A++L E
Sbjct: 272 GYCKAGDLVEAMRLRDEME 290
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN N LID YC G + A + + + G DVFT + L+ G C G+ A
Sbjct: 258 GVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEA 317
Query: 78 LQLLRRAE 85
L+ E
Sbjct: 318 KNLMEEME 325
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+L+GI + + +ILI+ + HL Q+N+AFSV A I K GYQPD T TL+ G C +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 74 IRPALQ 79
++ AL
Sbjct: 61 VKKALH 66
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ T I + +++ KG PN VT NIL+D C G++ A +F + +GY+ DV +
Sbjct: 326 HFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYT 385
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ING C R A DE P+ V Y
Sbjct: 386 VMINGLC------------REALFDEAYGCTPNAVTYE 411
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +MQ K + P+ +T + LID LG+I++ + + +R G +V T+
Sbjct: 255 KMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITY 314
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++L+N C+ G A+++ + +D +P++V Y+
Sbjct: 315 SSLLNVLCKSGHFDTAIRIFTKIKDK---GFEPNMVTYN 350
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M+LK I+PN + NILID C G + SV A + K+ +PDV T ++LI+G
Sbjct: 156 IRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215
Query: 68 F 68
+
Sbjct: 216 Y 216
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L +M+ G N +T + L++ C G + A +F I+ +G++P++ T+ L
Sbjct: 293 SYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNIL 352
Query: 65 INGFCQMGQIRPALQL 80
++G C+ G+++ A ++
Sbjct: 353 VDGLCKNGRLKDAQEI 368
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +K I P+ VT N LI +C +GQ+ A +F +R + P+V +F LI+G C+ G
Sbjct: 126 EMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEG 185
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +L +KPDVV S
Sbjct: 186 DVKGGKSVLAVMIKQ---SVKPDVVTCS 210
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M KGI P+ + NIL + +C +G++N A + RG PD+ T+ +LING
Sbjct: 548 LGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLING 607
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I+ AL L R + + + P+ V Y+
Sbjct: 608 LCKNGRIQEALNLFNRLQTEGMC---PNAVTYN 637
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ + ++M KG PN +T ILI+ +C G+I AF ++ + +G +PD++TF +LI
Sbjct: 331 SALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLI 390
Query: 66 NGFCQMGQIRPALQL 80
G C+ ++ AL L
Sbjct: 391 YGLCKNDKMEEALGL 405
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ NI+ID C G + A + ++G++P+V T+ LINGFC
Sbjct: 300 LYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFC 359
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I+ A Q+ KPD+ ++
Sbjct: 360 KDGKIQDAFQMYGEMSSK---GCKPDIYTFN 387
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 66.2 bits (160), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ GI+P+ + +ILID +C G+++ A VF +R G P++++++ LI+GFC+ G
Sbjct: 276 EMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEG 335
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL++ ++ ++ PDV YS
Sbjct: 336 RVDKALEVFEEMKNSGIL---PDVYSYS 360
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ GI+PN + +ILID +C G+++ A VF ++ G PDV++++ LI+GFC+ G
Sbjct: 311 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKG 370
Query: 73 QIRPALQL 80
+ A++
Sbjct: 371 DMDSAIKF 378
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M +G PN VT I+ Y L + N A ++ +++RG PD + LI F
Sbjct: 587 ALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAF 646
Query: 69 CQMGQIRPALQLLRRAEDDELVQ---LKPDVVIYS 100
C G++ A L DE+ Q P+VV+Y+
Sbjct: 647 CNTGEMNRAEALF-----DEMKQEGRCTPNVVMYT 676
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 65.9 bits (159), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK TV ++ M +GI PN VT L+D YC + Q+N A S+F T+ + G PD +
Sbjct: 128 MKEGKTVFAM---MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS 184
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +INGFC++ ++ A+ L ++ ++ P+VV Y+
Sbjct: 185 YNIMINGFCKIKKVDEAMNLFKKMHCKNII---PNVVTYT 221
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+PN VT LID C G+I++A + + RG PD+ T
Sbjct: 195 IKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
++++++ C+ Q+ A+ LL + +D
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKD 280
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 46/70 (65%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ +VFA + K+G +P+V T+ +L++G
Sbjct: 97 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 156
Query: 68 FCQMGQIRPA 77
+C + Q+ A
Sbjct: 157 YCLVKQVNKA 166
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ K + PN V N +ID C + +N AF +++ + G PDV T++ LI+G
Sbjct: 27 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISG 86
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F +G+++ A+ L + L +KPDV ++
Sbjct: 87 FFIVGKLKDAIDLFNKM---ILENIKPDVYTFN 116
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + NI+I+ +C + +++ A ++F + + P+V T
Sbjct: 160 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 219
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C+ G+I AL+L+ D + PD++ YS
Sbjct: 220 YTSLIDGLCKSGKISYALKLVDEMHDR---GVPPDIITYS 256
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFS--------VFATIRKRGYQP 56
S + L +M +G+ P+ +T + ++D C Q++ A + VF + +GY
Sbjct: 234 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 293
Query: 57 DVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
DV+ + +I GFC G AL LL + ED+ + PD Y
Sbjct: 294 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI---PDAKTY 333
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Query: 53 GYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ D ++ TLING C++GQ R ALQLLRR D +LVQ P+VV+Y+
Sbjct: 2 GFHLDQVSYGTLINGLCKVGQARAALQLLRRV-DGKLVQ--PNVVMYN 46
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M +GI P+ VT + LI + +G++ A +F + +PDV+T
Sbjct: 55 VKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYT 114
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
F L++GFC+ G+++ + +KP+VV Y
Sbjct: 115 FNILVDGFCKDGKMKEGKTVFAMMMKQ---GIKPNVVTY 150
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT + L+D YC + ++N A S+F T+ RG +V +++ +INGFC++
Sbjct: 138 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKM 197
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ PDV+ YS
Sbjct: 198 VDEAMKLFKEMHHK---QIFPDVITYS 221
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I PN VT + LI +C +G++ A +F + P+V+TF
Sbjct: 56 KHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTF 115
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++GFC+ G+++ A +L +KPDVV YS
Sbjct: 116 SILVDGFCKEGRVKEAKNVLAMMMKQ---GIKPDVVTYS 151
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 47/70 (67%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I PN T +IL+D +C G++ A +V A + K+G +PDV T+++L++G
Sbjct: 97 IDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDG 156
Query: 68 FCQMGQIRPA 77
+C + ++ A
Sbjct: 157 YCLVNEVNKA 166
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T IL+ C G++ A VF + +GY DV+ +
Sbjct: 267 HVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYT 326
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+I GFC G AL LL + E++ + PD Y
Sbjct: 327 VMIQGFCDKGLFDEALALLSKMEENGCI---PDAKTY 360
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I P+ +T + LID C G+I++A + + RG QPD+ T
Sbjct: 195 IKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIIT 254
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ + A+ LL + + ++PD+ Y+
Sbjct: 255 YNSILDALCKKHHVDKAIALLTKLKGQ---GIRPDMNTYT 291
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ + M +G+ N + +I+I+ +C + ++ A +F + + PDV T++ LI+G
Sbjct: 168 SIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGL 227
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I AL+L+ D +PD++ Y+
Sbjct: 228 CKSGRISYALELVDEMHDR---GQQPDIITYN 256
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G P+ +T N ++D C ++ A ++ ++ +G +PD+ T+ L
Sbjct: 234 SYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTIL 293
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
+ G C+ G++ A R+ +D LV+
Sbjct: 294 VKGLCRSGKLEDA----RKVFEDLLVK 316
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 53 GYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ D ++ TLING C++G+ R AL+LLRR D +LVQL D V+YS
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRV-DGKLVQL--DAVMYS 46
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MKHYSTVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVF 59
+K Y+ V+SL +Q K I P+ +T +ILI+ + LGQ+ FAFS+ I K G+Q DV
Sbjct: 82 LKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVR 141
Query: 60 TFATLINGFCQMGQIRPALQLLRRAED 86
TL+ G C G++ A+ LL D
Sbjct: 142 ILTTLMKGLCLKGRVLEAVSLLHEYVD 168
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 3 HYSTVISLSHQMQLKG-IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ + L +M ++G + P+ T NILID C LG+++ A++V A + KRG++PD+ ++
Sbjct: 260 RFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSY 319
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLK--PDVVIY 99
L+NG+C G + A Q+ D++V+ P+V+ Y
Sbjct: 320 NALMNGYCLSGSVGEAKQVF-----DKMVERTALPNVISY 354
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI PN T NIL+D C G++ +A +F + +G QP++ T+ +I+G C+ G + A
Sbjct: 451 GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEA 510
Query: 78 LQLLRRAEDDE 88
LL + ++
Sbjct: 511 EALLYKMVNNN 521
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I + +M+ + PN + N +ID C G ++ A + + + G + DV+++ ++I+G
Sbjct: 195 IQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHG 254
Query: 68 FCQMGQIRPALQLLRRAEDDELV---QLKPDVVIYS 100
FC +G+ + A++LL DE+V ++ PDV ++
Sbjct: 255 FCSVGRFQAAVKLL-----DEMVVRGKVYPDVYTFN 285
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
MQ G+ P+ VT NILI CY LG + A + + G PDV+T+ ++I+GF Q G+
Sbjct: 275 MQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGR 334
Query: 74 IRPALQLLRR 83
I AL LL+
Sbjct: 335 ISHALDLLKE 344
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ + L H+M KG+ PN VT LI+ C + ++ A + + +R RG P+ T+
Sbjct: 314 NFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYT 373
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TL++GFC+ G + A ++L D V P VV Y+
Sbjct: 374 TLVDGFCRQGLMNEAYKVLSEMVDSGFV---PSVVTYN 408
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K+ S + + M+ +G+ PN T L+D +C G +N A+ V + + G+ P V T
Sbjct: 347 VKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVT 406
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L+NGFC +G++ A+ +L+ + L PDVV YS
Sbjct: 407 YNALVNGFCCLGRVEEAVGVLKDMVERGLF---PDVVSYS 443
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 4 YSTVISL---------SHQMQL----KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIR 50
YSTVISL + QM+L K I+P+ VT + LI C +++ AF +F +
Sbjct: 442 YSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEML 501
Query: 51 KRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
RG PD T+ TL+NG+C G++ AL L DE++Q PDVV YS
Sbjct: 502 GRGLSPDEVTYTTLMNGYCVEGELSKALDL-----HDEMMQKGFLPDVVTYS 548
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M LKG+ P+ VT N L++ +C G + A + + +G P+V T+ TLING C++
Sbjct: 289 EMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVK 348
Query: 73 QIRPALQLLRRAEDDEL 89
+ A+++L D L
Sbjct: 349 NLSRAMEILSLMRDRGL 365
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G +P+ VT N L++ +C LG++ A V + +RG PDV +++T+I+ FC+ G
Sbjct: 394 EMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNG 453
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A Q+ + ++ PD V YS
Sbjct: 454 ELGKAFQMKLEMVEKRIL---PDAVTYS 478
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M+ KG +PN VT N +I YC +++ AF + + + + ++ ++ +ING C
Sbjct: 218 NEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQ 277
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ ++++ E+ L L PD V Y+
Sbjct: 278 GRMNETMEVI---EEMSLKGLSPDCVTYN 303
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K + N ++ N +I+ C G++N V + +G PD T+ TL+NGFC+ G
Sbjct: 255 MGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGN 314
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
AL LL L P+VV Y+
Sbjct: 315 FHQALVLLHEMSGK---GLSPNVVTYT 338
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ S L +M +G+ P+ VT L++ YC G+++ A + + ++G+ PDV T+
Sbjct: 488 RKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTY 547
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LING + + R A +LL + DE V P+ V Y
Sbjct: 548 SVLINGLNKKARTREAKKLLLKLFYDESV---PNDVTYE 583
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M + I+P+ VT N LID C LG+I++A + + RG PD+ T
Sbjct: 195 IKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 254
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ Q+ A+ LL + +D ++P++ Y+
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQ---GIRPNMYTYT 291
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK V+++ M +G+ PN VT + L+D YC + ++N A S+F T+ + G PD+ +
Sbjct: 128 MKEAKNVLAM---MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHS 184
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ LING C++ A+ L E+ ++ PDVV Y+
Sbjct: 185 YSILINGLCKIKMTDEAMNLF---EEMHCRKIIPDVVTYN 221
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T ILID C G+++ A ++F + +GY V T+ +I+G
Sbjct: 272 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVKGYNITVNTYTVMIHG 331
Query: 68 FCQMGQIRPALQLLRRAEDDE 88
FC G AL LL + +D+
Sbjct: 332 FCNKGLFDEALALLSKMKDNS 352
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ A +V A + K+G +P+V T++ L++G
Sbjct: 97 IGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDG 156
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+C + ++ A + + PD+ YS
Sbjct: 157 YCLVKKVNKAKSIFNTMAQG---GVNPDIHSYS 186
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I P+ T N LI +C +G++ A +F + PD++TF
Sbjct: 56 KHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTF 115
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ FC+ G+++ A +L +KP+VV YS
Sbjct: 116 NILVDAFCKEGKMKEAKNVLAMMMKQ---GMKPNVVTYS 151
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + +ILI+ C + + A ++F + R PDV T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C++G+I AL+L+ D + PD++ YS
Sbjct: 220 YNSLIDGLCKLGKISYALKLVDEMHDR---GVPPDIITYS 256
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L ++ K + P+ V N +ID C +N AF +++ + + PDVFT+ LI
Sbjct: 25 AALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALI 84
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+GFC +G+++ A+ L + L + PD+ ++
Sbjct: 85 SGFCIVGKLKDAIGLFNKM---TLENINPDMYTFN 116
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G+ P+ +T + ++D C Q++ A ++ ++ +G +P+++T+ L
Sbjct: 234 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 293
Query: 65 INGFCQMGQIRPA 77
I+G C+ G++ A
Sbjct: 294 IDGLCKGGRLDDA 306
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 53 GYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ D ++ TLING C++G+ R ALQLLRR D +LVQ P VV+Y+
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRV-DGKLVQ--PSVVMYN 46
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S I + M +G PN VT N +I+ C G+++ A + T+ K+G +PDV T++TL
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL 380
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G C +G+I A+ LL E +KPDV ++
Sbjct: 381 VKGLCGVGKIDEAVDLLNLLMSKEF-HIKPDVFAFN 415
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KHY VIS+ +M + P F + + LI+ + + + +FAF V I KRG+ +V+ F
Sbjct: 73 KHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNF 132
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L+ GFCQ G A+ L + + L+ PD V Y+
Sbjct: 133 NLLLKGFCQSGDSHKAMDLFCMMKRNCLI---PDCVSYN 168
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT + LID +C G + F + + K G + DVF ++ LI+GFC G I +L
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256
Query: 81 LRRAEDDELVQ--LKPDVVIYS 100
+E+++ + P+VV YS
Sbjct: 257 F-----NEMLRKNVTPNVVTYS 273
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+P+ VT N LID C G+I++A + + RG PD+ T
Sbjct: 23 IKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYALKLVDEMNDRGQLPDIIT 82
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ +++N C+ Q+ A+ LL + +D
Sbjct: 83 YNSILNALCKNHQVDKAIALLTKLKD 108
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+ + + NI+I+ +C + +++ A ++F + + PDV T+ +LI+G C+ G+
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I AL+L+ D QL PD++ Y+
Sbjct: 61 ISYALKLVDEMNDRG--QL-PDIITYN 84
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V+S QM G+ P+ + NI+I+ +C + +N AFS+F +R RG P+ T+++LI+
Sbjct: 234 VLSTITQM---GVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLID 290
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C++G+I A +L+ D+ +PD+ Y+
Sbjct: 291 GLCKLGRISYAWELVDEMRDN---GQQPDICTYN 321
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + SL ++M+ +GI PN VT + LID C LG+I++A+ + +R G QPD+ T
Sbjct: 260 IKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICT 319
Query: 61 FATLINGFCQMGQIRPALQL 80
+ +LI+ C+ + +QL
Sbjct: 320 YNSLIDALCKNHHVDQGIQL 339
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLG-----------------QINFAFSVFATIRK 51
L H+M LK I PN T NIL+D C G ++N A V +TI +
Sbjct: 181 GLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQ 240
Query: 52 RGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G PD ++ +INGFC++ + A L + P+ V YS
Sbjct: 241 MGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEM---RCRGISPNTVTYS 286
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L QM +K I P+ VT N LI +C +GQ+ AF +F + + P+V+TF L++
Sbjct: 146 ELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDAL 205
Query: 69 CQMGQIRPALQLL 81
C+ G ++ A LL
Sbjct: 206 CKEGNVKGAKNLL 218
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 35 HLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQ 79
+LG++ FAFS+FA I K G+ P TF TLING C G+ + AL
Sbjct: 32 NLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALH 76
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+GI + T NILID C G++ A +F + +GY V+T+ +ING C G +
Sbjct: 335 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDE 394
Query: 77 ALQLLRRAEDDELVQLKPDVV 97
A LL + ED+ V PD V
Sbjct: 395 AEALLSKMEDNGCV---PDAV 412
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ +++ + L +++ K ++P+ VT N LID C G ++ A + + K G PDV T
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
F L+ GFCQMG + A +L DE++ LKPD + Y+
Sbjct: 420 FTILVRGFCQMGNLPMAKELF-----DEMLSRGLKPDCIAYT 456
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ KG+ PN +T N LI C ++ A+++FA + +G P+ +T+ LIN +
Sbjct: 582 EMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQ 641
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL+L + D E +KPD +S
Sbjct: 642 YWQDALKLYKDMLDRE---IKPDSCTHS 666
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+MP+ V+ N LI Y LG A +F+ +R + P V T+ TLI+G C+ G L
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN----L 398
Query: 79 QLLRRAEDDELVQ-LKPDVVIYS 100
+ + +DD + L PDVV ++
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFT 421
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KGI P+ VT +LI Y G+++FA F ++ +G P+V T+ LI G C+
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607
Query: 74 IRPALQLLRRAE 85
+ A L E
Sbjct: 608 MDVAYNLFAEME 619
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G +P VT N ++ C LG+++ A + PD+ ++ TLI G+
Sbjct: 299 LRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYS 358
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G AL L LV P VV Y+
Sbjct: 359 RLGNFAEALLLFSELRSKNLV---PSVVTYN 386
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK V+++ M +G+ PN VT + L+D YC + ++N A S+F T+ + G PD+ +
Sbjct: 128 MKEAKNVLAM---MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHS 184
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ LING C++ A+ L E+ ++ PDVV Y+
Sbjct: 185 YSILINGLCKIKMTDEAMNLF---EEMHCRKIIPDVVTYN 221
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M + I+P+ VT N LID C G+I++A + + RG PD+ T
Sbjct: 195 IKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++++++ C+ Q+ A+ LL +D ++P++ Y+
Sbjct: 255 YSSILDALCKNHQVDKAIALLTNLKDQ---GIRPNMYTYT 291
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M L+ I P+ T NIL+D +C G++ A +V A + K+G +P+V T++ L++G
Sbjct: 97 IGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDG 156
Query: 68 FCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+C + ++ A + + + Q + PD+ YS
Sbjct: 157 YCLVKKVNKAKSIF-----NTMAQGGVNPDIHSYS 186
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I P+ T N LI +C +G++ A +F + PD++TF
Sbjct: 56 KHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTF 115
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ FC+ G+++ A +L +KP+VV YS
Sbjct: 116 NILVDAFCKEGKMKEAKNVLAMMMKQ---GMKPNVVTYS 151
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L ++ +GI PN T ILID C G++ A ++F + +GY V T+ +I+G
Sbjct: 272 IALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 331
Query: 68 FCQMGQIRPALQLLRRAEDD 87
FC G AL LL + +D+
Sbjct: 332 FCNKGLFDEALALLSKMKDN 351
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ K + P+ V N +ID C +N AF +++ + + PDVFT+ LI+G
Sbjct: 27 LQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALISG 86
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC +G+++ A+ L + L + PD+ ++
Sbjct: 87 FCIVGKLKDAIGLFNKM---TLENINPDMYTFN 116
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + +ILI+ C + + A ++F + R PDV T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C+ G+I AL+L+ D + PD++ YS
Sbjct: 220 YNSLIDGLCKSGKISYALKLVDEMHDR---GVPPDIITYS 256
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G+ P+ +T + ++D C Q++ A ++ ++ +G +P+++T+ L
Sbjct: 234 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTIL 293
Query: 65 INGFCQMGQIRPA 77
I+G C+ G++ A
Sbjct: 294 IDGLCKGGRLEDA 306
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 53 GYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ D ++ TLING C++G+ R ALQLLRR D +LVQ P VV+Y+
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRV-DGKLVQ--PSVVMYN 46
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M GI PN VT LID +C +G++ A +F + P+V+TF L++ FC
Sbjct: 13 LYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFC 72
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I A +L + + LK DVV YS
Sbjct: 73 KEGKIEEAKNVLNTMMEKD---LKSDVVAYS 100
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M + I PN T N L+D +C G+I A +V T+ ++ + DV +++L+NG
Sbjct: 46 LGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNG 105
Query: 68 FCQMGQIRPALQLLRRAEDDEL 89
+C + ++ A + + + EL
Sbjct: 106 YCLVNEVFKAQSIFKTMAEREL 127
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK I L +M LK I P+ VT + LID C G++++A + + RG P++ T
Sbjct: 144 MKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIIT 203
Query: 61 FATLINGFCQ 70
+ +++ C+
Sbjct: 204 YCPIVDVLCK 213
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M K + + V + L++ YC + ++ A S+F T+ +R DV ++ +IN FC+M
Sbjct: 85 NTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKM 144
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ A++L E+ L Q+ PDVV Y
Sbjct: 145 KMVDEAIKLF---EEMPLKQIFPDVVTY 169
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFS-----VFATIRKRGYQP 56
K + V+ L +M K I PN VT N LI +C +GQ+N AF +F + ++G P
Sbjct: 34 KLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFGLLQLFIFGIMARKGVTP 93
Query: 57 DVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
D ++ +INGFC++ + A+ L E+ Q+ P+VV Y+
Sbjct: 94 DTDSYIIMINGFCKIKMVDEAMNLF---EEMHCKQIFPNVVTYN 134
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I PN VT N LI+ C G+I++A + + RG P++ T
Sbjct: 108 IKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIIT 167
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDEL 89
+ ++++ C+ + A+ L + +D ++
Sbjct: 168 YNSILDVLCKNYDVDKAIVFLTKLKDQDI 196
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPA 77
+ G A
Sbjct: 419 KQGHFEEA 426
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPA 77
+ G A
Sbjct: 419 KQGHFEEA 426
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPALQLLR 82
+ G A +++
Sbjct: 419 KQGHFEEASKVVN 431
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPA 77
+ G A
Sbjct: 419 KQGHFEEA 426
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPA 77
+ G A
Sbjct: 419 KQGHFEEA 426
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L QM + I P+ + NILI+ +C G++N A + +RG PD+ T+ +LING
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG+ + AL L + + PD V Y+
Sbjct: 627 LCKMGRFQEALNLFNGLQAK---GIHPDAVTYN 656
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ + + M KG+ N V N LI C G+I A ++ + +G +PD++TF
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LI G C+ ++ AL L R
Sbjct: 482 SLIYGLCKNDKMEEALGLYR 501
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ P+ VT N LI+ C +G+ A ++F ++ +G PD T+ TLI+ +C G
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A QLL + + + P+ + +S
Sbjct: 671 ACQLLFKGVSNGFI---PNEITWS 691
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + G P+ T NI+ID C G + A + K+G++P+V T+ LI+GFC
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 70 QMGQIRPA 77
+ G A
Sbjct: 419 KQGHFEEA 426
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L + K I P+ T N LI +C +G++ A +F + + PDV+TF
Sbjct: 347 KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTF 406
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++GFC+ G I+ A +L +KPDVV YS
Sbjct: 407 SILVDGFCKDGNIKEAKNVLAMMMKQ---SIKPDVVTYS 442
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ +T I +C GQI+ A + G+ D ++ TLING C++G+ + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L+LLRR D +LVQ PDVV+Y+
Sbjct: 318 LELLRR-NDGKLVQ--PDVVMYN 337
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I P+ VT + L+D YC + ++N A S+F T+ RG +V ++ +INGFC++
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ PDV+ YS
Sbjct: 489 VDEAMKLFKEMHHK---QIFPDVITYS 512
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI P+ T IL+ C G++ A VF + +GY DV+ +
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I GFC G AL LL + E++ + PD Y
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENGCI---PDAKTYE 652
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFA 47
KHY TV+SLS +M+ KGI NF+ NILI+ +C LG I FAFSV
Sbjct: 124 KHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLT 169
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L ++M K I+P+ T +IL+D +C G I A +V A + K+ +PDV T+++L++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 67 GFCQMGQIRPA 77
G+C + ++ A
Sbjct: 447 GYCLVNEVNKA 457
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L +M K I P+ +T + LID C G+I++A + + RG QPD+ T
Sbjct: 486 IKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIIT 545
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ + A+ LL + + ++PD+ Y+
Sbjct: 546 YNSILDALCKKHHVDKAITLLTKLKGQ---GIRPDMNTYT 582
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K + P+ V N +ID C +N AF +++ + PDVFT+ LI+GFC +G+++
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + ++ PDV +S
Sbjct: 387 AIDLFNKMTSKNII---PDVYTFS 407
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ + M +G+ N + NI+I+ +C + ++ A +F + + PDV T+++LI+G
Sbjct: 459 SIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGL 518
Query: 69 CQMGQIRPALQLLRRAEDDEL--VQLKPDVVIYS 100
C+ G+I AL+L+ DE+ +PD++ Y+
Sbjct: 519 CKSGRISYALELV-----DEMHYRGQQPDIITYN 547
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G P+ +T N ++D C ++ A ++ ++ +G +PD+ T+ L
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ 91
+ G CQ G++ A R+ +D LV+
Sbjct: 585 VKGLCQSGKLEDA----RKVFEDLLVK 607
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V+ + M KG PN +T N +I+ C+ ++N A + ++ +G PDV +F TLI
Sbjct: 515 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 574
Query: 67 GFCQMGQIRPALQLLRRAE 85
GFC++G + A L R E
Sbjct: 575 GFCKVGDLDGAYGLFRGME 593
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
H+M G PN T N +ID YC G + A + +G++PD FT+ +L+NGFCQ
Sbjct: 310 HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQD 369
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G A+ + + D L+P +++Y+
Sbjct: 370 GDPDQAMAVFK---DGLGKGLRPSIIVYN 395
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L ++M KG P+ T N++I+ C +G ++ A + +G PD+FT+ TL++
Sbjct: 410 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 469
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+C+ ++ A++L+ R + PDV+ Y+
Sbjct: 470 GYCRQLKLDSAIELVNRMWSQGMT---PDVITYN 500
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG P+ T L++ +C G + A +VF +G +P + + TLI G CQ G I P
Sbjct: 350 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 409
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
ALQL+ + KPD+ Y+
Sbjct: 410 ALQLMNEMAEK---GCKPDIWTYN 430
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG +P+ T N L+D YC +++ A + + +G PDV T+ TL+NG C+ +
Sbjct: 455 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 514
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
+++ + + P+++ Y+
Sbjct: 515 VMEIFKAMTEKGCA---PNIITYN 535
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ I L ++M +G+ P+ +T N L++ C + +F + ++G P++ T+ T+
Sbjct: 478 DSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTI 537
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I C ++ A+ LL + L PDVV +
Sbjct: 538 IESLCNSKKVNEAVDLLGEMKSKGLT---PDVVSFG 570
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG+ P+ + N LI C G I A + + ++G +PD++T+ +ING C+MG +
Sbjct: 385 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 444
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A L+ A + PD+ Y+
Sbjct: 445 ANHLIGDAITKGCI---PDIFTYN 465
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G+ PN T NI I C G ++ A + + + G +PDV T+ T+I G C+ ++
Sbjct: 245 RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVE 304
Query: 77 ALQLLRR 83
A + L +
Sbjct: 305 AEECLHK 311
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ T N L+ C G + + +F + KRG P++FTF I G C+ G + A+
Sbjct: 212 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 271
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+LL + L+PDVV Y+
Sbjct: 272 RLLGCVSRE---GLRPDVVTYN 290
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM+ G+ PN T NIL+ YC L + A V + +G PDV+T+ T++ G C G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I A++L + E +LV PDVV Y+
Sbjct: 331 KIDEAVRLRDKMESFKLV---PDVVTYN 355
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ +G+ N VT NI+I +C G+I+ A +V + + G+ PD FT+ T+ING+C
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 70 QMGQIRPALQLL 81
+ G++ A +++
Sbjct: 433 KAGKMAEAYKMM 444
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG++P+ TSNI+I YC G + AF + + +PD+FT L+ G C+ G +
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614
Query: 77 ALQLL 81
L L
Sbjct: 615 GLTLF 619
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M+ +G P+ VT NILI+ YC ++ AF ++ + RG P++ +++ L+NG C+
Sbjct: 287 EKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKE 346
Query: 72 GQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
G+I+ A QL +++VQ + PDVV Y+
Sbjct: 347 GKIKEAHQLF-----NQMVQRGIDPDVVSYN 372
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M ++G++PN ++ + L++ C G+I A +F + +RG PDV ++ TLI+G+C+ G
Sbjct: 324 MGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEG 382
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M G MPN T N LID + LG + + +++ + RG PDV TF +LING+
Sbjct: 305 SLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGY 364
Query: 69 CQMGQIRPALQL 80
+GQ++PAL++
Sbjct: 365 FVVGQVKPALEM 376
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
++ +++ H+M +G P+ VT LI+ Y +GQ+ A ++ + R ++TF+ L
Sbjct: 336 ASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVL 395
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NGFC+ ++ A +L R + ++V P +Y+
Sbjct: 396 VNGFCKNNRLHEARDILTRLKQSDVV---PQSFVYN 428
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P T NIL+ C G+I+ A + +R G PDV T+ T+I+GFC++ ++ A
Sbjct: 211 PVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSF 270
Query: 81 LRRAEDDELVQLKPDVVIYS 100
L + Q+ PDVV Y+
Sbjct: 271 LNEVCLNG--QVAPDVVSYT 288
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+PN VT LID C G+I++A + + RG PD+ T
Sbjct: 23 IKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 82
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
++++++ C+ Q+ A+ LL + +D
Sbjct: 83 YSSILDALCKNHQVDKAIALLTKLKD 108
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G+ P+ + NI+I+ +C + +++ A ++F + + P+V T+ +LI+G C+ G+
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 60
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I AL+L+ D + PD++ YS
Sbjct: 61 ISYALKLVDEMHDR---GVPPDIITYS 84
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRK--------RGYQP 56
S + L +M +G+ P+ +T + ++D C Q++ A ++ ++ +GY
Sbjct: 62 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 121
Query: 57 DVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
DV+ + +I GFC G AL LL + ED+ + PD Y
Sbjct: 122 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCI---PDAKTYE 162
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 62.4 bits (150), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI PN VT + L+D YC + ++N A +F+T+ RG +V+++ +INGFC++
Sbjct: 138 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 197
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A+ L E+ +L PDVV Y+
Sbjct: 198 TDEAMNLF---EEMHCRKLIPDVVTYN 221
Score = 59.7 bits (143), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M L+G+ N + NI+I+ +C + + A ++F + R PDV T+ +LING C+ G+
Sbjct: 173 MSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGK 232
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I AL+L+ D PD++ YS
Sbjct: 233 ISYALKLVDEMHDR---GQPPDIITYS 256
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M + ++P+ VT N LI+ C G+I++A + + RG PD+ T
Sbjct: 195 IKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIIT 254
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++L++ C+ Q+ A+ LL +D ++P++ Y+
Sbjct: 255 YSSLLDALCKNHQVDKAIALLTNLKDQ---GIRPNMYTYT 291
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L ++ +GI PN T ILID C G++ A ++F + +GY V T+ +I+G
Sbjct: 272 IALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHG 331
Query: 68 FCQMGQIRPALQLLRRAEDD 87
FC G AL LL + +D+
Sbjct: 332 FCNKGLFDEALALLSKMKDN 351
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH + L +M K I P+ T N LI +C +G++ A +F + + P V+TF
Sbjct: 56 KHVNDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTF 115
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ FC+ G ++ A +L + P+ V YS
Sbjct: 116 NILVDAFCKEGNVKEAKNVLAMMMKQ---GINPNAVTYS 151
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M K I P T NIL+D +C G + A +V A + K+G P+ T+++L++G+C
Sbjct: 99 LFNKMTSKNINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYC 158
Query: 70 QMGQIRPA 77
+ ++ A
Sbjct: 159 LVNEVNNA 166
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ K + P+ V N +ID C +N AF +++ + + PDVFT+ LI+G
Sbjct: 27 LELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMASKRIFPDVFTYNALISG 86
Query: 68 FCQMGQIRPALQLLRR 83
FC +G+++ A L +
Sbjct: 87 FCIVGKLKDATDLFNK 102
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G P+ +T + L+D C Q++ A ++ ++ +G +P+++T+ L
Sbjct: 234 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTIL 293
Query: 65 INGFCQMGQIRPA 77
I+G C+ G++ A
Sbjct: 294 IDGLCKGGRLEDA 306
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
M+L GI+PN T + +I YC+ G I+ AF+VF +R++ + T+ LING C+M
Sbjct: 258 ESMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRM 317
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A++L R V L+P++ Y+
Sbjct: 318 KKLGEAVKLFYRVNR---VGLRPNIFTYN 343
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + L +++ G+ PN T N LI YC +I+ A ++ ++ G P V T
Sbjct: 317 MKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVT 376
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TLI G+ ++G + AL L++ E+ + P V Y+
Sbjct: 377 YNTLIAGYSKVGNLAGALNLVKEMEERNIA---PTKVTYT 413
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
++L +M+ + I P VT IL++ + + + AF + + + K G DV+T+ LI+
Sbjct: 393 ALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLIH 452
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
G C G ++ A +L + DEL ++P+ VIY
Sbjct: 453 GLCMNGSMKEASKLFKSL--DEL-NMEPNSVIY 482
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ K I + +T N+LI+ C + ++ A +F + + G +P++FT+ TLI G+C
Sbjct: 294 EMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAE 353
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I A++L + + L P VV Y+
Sbjct: 354 KIDTAVRLYNELKSN---GLSPTVVTYN 378
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+I+L+ Q++ +GI PN T ILID C G++ A ++F + +GY V T+ +I+
Sbjct: 451 IITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIH 510
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC G A+ LL + +D+ + P+ V Y
Sbjct: 511 GFCNKGLFDEAMTLLSKMKDNCCI---PNAVTYE 541
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI P+ VT N L+D YC + ++N A S+F T+ RG +V +++ +IN FC++
Sbjct: 337 MMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKM 396
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L + Q+ P+V+ YS
Sbjct: 397 VDQAMKLFKEMHHK---QIFPNVITYS 420
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I P+ T N LI+ +C +G++ A +F + PDV+TF L++ F
Sbjct: 262 DLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 321
Query: 69 CQMGQIRPA---LQLLRRAEDDELVQLKPDVVIYS 100
C+ G+++ A L ++ + +KPDVV Y+
Sbjct: 322 CKEGRVKEAKNGLAMMMKQ------GIKPDVVTYN 350
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I L ++M + I P+ T NIL+D +C G++ A + A + K+G +PDV T+ +L++
Sbjct: 295 AIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMD 354
Query: 67 GFCQMGQIRPA 77
+C + ++ A
Sbjct: 355 RYCLVNEVNKA 365
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K + PN V N +ID C N AF +++ + + PDV T+ LINGFC +G+++
Sbjct: 235 KLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKD 294
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + + + PDV ++
Sbjct: 295 AIGLFNKMTSE---NINPDVYTFN 315
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDV-- 58
+K + L +M K I PN +T + LID C G+I++A + + RG QPD+
Sbjct: 394 IKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT 453
Query: 59 --------------FTFATLINGFCQMGQIRPA 77
FT+ LI+G C+ G++ A
Sbjct: 454 LTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDA 486
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K L QM ++G+ P+ T N L+ +C +G I A + T+ G +PD+FT+
Sbjct: 496 KRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTY 555
Query: 62 ATLINGFCQMGQIRPALQLLRRAE 85
TLI G C+ G++ A +LLR +
Sbjct: 556 GTLIGGLCRAGRVDVASKLLRSVQ 579
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G P+ VT N L++ +C +G +N A + + ++G+ PDV+T+ +LI+G C++G+
Sbjct: 266 EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEK 325
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+++L++ L + P+ V Y+
Sbjct: 326 AIEILQQM---ILRECSPNTVTYN 346
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ + QM G + V+ +L++ +C G++ A + + G+ PD TF +L+N
Sbjct: 221 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 280
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
GFC++G + AL ++ D +++ PDV Y+
Sbjct: 281 GFCRIGNVNDALDIV-----DFMIEKGFDPDVYTYN 311
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG++P+ T N LI C + A +F ++ +G +PD FT++ LI+ C +++
Sbjct: 371 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 430
Query: 77 ALQLLRRAE 85
AL LL+ E
Sbjct: 431 ALMLLKEME 439
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ + I + QM L+ PN VT N LI C +I A + + +G PDV T
Sbjct: 320 LGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCT 379
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F TLI G C A+++ ++ KPD YS
Sbjct: 380 FNTLIQGLCLSKNQDIAMEMFEEMKNK---GCKPDEFTYS 416
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G++PN VT LID C G+I+ A F ++ RG +PD+ T+ LING C+ G
Sbjct: 321 EMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDG 380
Query: 73 QIRPALQLLRRAEDDELV--QLKPDVVIYS 100
++ A +LL +E++ KPD + ++
Sbjct: 381 DLKEARKLL-----NEMIGNGFKPDKITFT 405
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN NIL+ +C +G + A VF I +RG +P V +F TLI+G+C+ +
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L E + ++ PDV YS
Sbjct: 281 FVLKSVMESE---RISPDVFTYS 300
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M G P+ T ++IDC+C G + + +++ G P V T+ L+NGFC+ G
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520
Query: 73 QIRPALQLLRRAEDDELV 90
Q++ A LL + E+V
Sbjct: 521 QMKNAKMLLHAMLNMEVV 538
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ +GI P+ +T N LI+ C G + A + + G++PD TF TL++G C+ G
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 74 IRPALQLLRR 83
+ AL++ R
Sbjct: 417 MDSALEIKDR 426
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
++ +G+ P+ V+ N LI YC + F + + + PDVFT++ LING C+
Sbjct: 251 EISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKES 310
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A L DE+ + L P+ V ++
Sbjct: 311 RVEEANGLF-----DEMCEMGLVPNGVTFT 335
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G+ P+F T LI YC G + A S+F T+ R +PDV T+ TL++GFC
Sbjct: 470 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 529
Query: 70 QMGQIRPALQL 80
++G++ A +L
Sbjct: 530 KVGEMEKAKEL 540
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + ++M +G + + VT N L++ C ++ A +F + +RG PD +T TL
Sbjct: 430 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTL 489
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G+C+ G + AL L E L LKPDVV Y+
Sbjct: 490 IHGYCKDGNMTKALSLF---ETMTLRSLKPDVVTYN 522
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ KG+ + VT N L++ YC G ++ AF + + +G +P +FT+ LING C+ G
Sbjct: 263 EMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEG 322
Query: 73 QIRPALQLL 81
A ++L
Sbjct: 323 SYERAKRVL 331
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ +SL M L+ + P+ VT N L+D +C +G++ A ++ + R P +F+ L
Sbjct: 500 TKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 559
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVV 97
INGFC +G + A +L DE+ + +KP +V
Sbjct: 560 INGFCSLGLVSEAFRLW-----DEMKEKGIKPTLV 589
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L +M+ KGI P VT N +I Y G ++ A T+ G PD T+ TL
Sbjct: 570 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 629
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
IN F + A L+ E+ L+ P++V Y+
Sbjct: 630 INSFVKEENFDRAFFLINNMEERGLL---PNLVTYN 662
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L + M + I P++++ +ILI+ +C LG ++ AF ++ ++++G +P + T T+I G+
Sbjct: 540 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 599
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A L + + PD + Y+
Sbjct: 600 RAGNLSKANDFLNTMISE---GVPPDCITYN 627
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G++PN VT N LIDC C G+++ A+ + T+ + G PD+ T L++G C+
Sbjct: 355 EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSK 414
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A+ L ++LV+ L PDV Y+
Sbjct: 415 RLDQAILLF-----NQLVESGLTPDVWSYT 439
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L ++M +KG +P+ +T +IL+D ++ A +F + KRG +PDV + +
Sbjct: 487 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 546
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G+C+ +I A+ L R LV PD+V Y+
Sbjct: 547 IDGYCKSERIDEAINLFREMHMKNLV---PDIVTYT 579
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G PN VT L+ YC G ++ A +F I + G++ DV+T+ I+G+C++G
Sbjct: 285 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG 344
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++R A+++ DE+ + + P++V Y+
Sbjct: 345 RVRDAVRVF-----DEMCREGVVPNIVTYN 369
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G+ P+ VT IL+D C +++ A +F + + G PDV+++ LI+G C +
Sbjct: 391 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 450
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ LLR D L L P +V YS
Sbjct: 451 MGEAMNLLR---DMHLKNLVPHIVTYS 474
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 CYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
C+ HLG ++F+FS+F I KRGY D T++ G C G + AL+
Sbjct: 86 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEF 134
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
N V +I+IDC C G ++ F + + G P+ FT+ +LI G C +G+ L+
Sbjct: 189 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 248
Query: 82 RRAEDDELVQLKPDVVIY 99
DE+++ DV +Y
Sbjct: 249 -----DEMIRRGLDVSVY 261
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+++ L GI P+ T I I C G++ A VF + +GY DV+T+ +I GFC
Sbjct: 229 ITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFC 288
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
G + AL LL + ED+ + PD IY
Sbjct: 289 DKGLFKEALALLSKMEDNGCI---PDAKIY 315
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L ++M + I P+ T NI +D +C G++ A V + + K G +P V T+ TL+NG
Sbjct: 105 IGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNG 164
Query: 68 FCQMGQIRPALQLLRRAED-------DELVQLK---------PDVVIYS 100
+C + ++ A + DE + L PDVV YS
Sbjct: 165 YCLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYS 213
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K I P+ +T + LI +C +G++N +F + PDV+TF ++ FC
Sbjct: 72 LYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFC 131
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A +L +KP VV Y+
Sbjct: 132 KEGRVKEAKYVLSMMMKH---GIKPSVVTYN 159
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ K + PN + + +ID C +N AF +++ + + PDV T++ LI+G
Sbjct: 35 LQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISG 94
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC +G++ + L + + + PDV ++
Sbjct: 95 FCIVGKLNDTIGLFNKMTAE---NINPDVYTFN 124
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ VT I+I+ YC + A +F +++RG PD T+ +ING+C+M +R A
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREA 670
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+L + ++ +KPDV+ Y+
Sbjct: 671 HELFKDMKER---GIKPDVIAYT 690
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L M+ +GI P+ VT I+I+ YC + + A +F +++RG +PDV + +I G
Sbjct: 637 ELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGL 696
Query: 69 CQMGQIRPALQLLRRAED 86
G A QL D
Sbjct: 697 LNSGHTEIAFQLYNEMID 714
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S+ + + +M L G P+ VT LID YC +GQ+++ ++ ++ R + +++T++ +
Sbjct: 316 SSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSII 375
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ C+ +++ A +LLR E+V P IY+
Sbjct: 376 ISALCKSNRLQEAHELLRLLNQSEIV---PQAFIYN 408
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK S++ ++M G+ P+ + N LID + G I+ A + + G PDV T
Sbjct: 280 MKEASSIF---NEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVT 336
Query: 61 FATLINGFCQMGQIRPALQL 80
F +LI+G+C++GQ+ L+L
Sbjct: 337 FTSLIDGYCRVGQVDYGLEL 356
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN V+ I+I YC L + A S+F + + G QP V +F LI+GF + G I A+ +
Sbjct: 262 PNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDM 321
Query: 81 LRRAEDDELVQLKPDVVIYS 100
++ L PDVV ++
Sbjct: 322 HKKM---ILHGCDPDVVTFT 338
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI PN T ILI C G++ A VF I +GY DV+ +A
Sbjct: 60 HLDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYA 119
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDE 88
+I+GFC G AL +L + D
Sbjct: 120 VMIHGFCNNGLFDEALAMLSKMTTDN 145
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K I+P+ V N LID +C G+I++A + + RG P++ T+ ++++ C+
Sbjct: 1 MHCKNIIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHH 60
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ LL + +D ++P++ Y+
Sbjct: 61 LDKAITLLSKLKDQ---GIQPNIYTYT 84
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M +G PN +T N ++D C ++ A ++ + ++ +G QP+++T+ L
Sbjct: 27 SYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITLLSKLKDQGIQPNIYTYTIL 86
Query: 65 INGFCQMGQIRPALQLLR 82
I G C+ G++ A ++
Sbjct: 87 IGGLCKGGRLEDARKVFE 104
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI PN VT LID +C +G++ A +F + P+V+TF L++ FC+ G+I A
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+L + + LK DVV YS
Sbjct: 86 KNVLNTMMEKD---LKSDVVAYS 105
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M + I PN T N L+D +C G+I A +V T+ ++ + DV +++L+NG
Sbjct: 51 LGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNG 110
Query: 68 FCQMGQIRPALQLLRRAEDDEL 89
+C + ++ A + + + EL
Sbjct: 111 YCLVNEVFKAQSIFKTMAEREL 132
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK I L +M LK I P+ VT + LID C G++++A + + RG P++ T
Sbjct: 149 MKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIIT 208
Query: 61 FATLINGFCQ 70
+ +++ C+
Sbjct: 209 YCPIVDVLCK 218
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M K + + V + L++ YC + ++ A S+F T+ +R DV ++ +IN FC+M
Sbjct: 90 NTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKM 149
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ A++L E+ L Q+ PDVV Y
Sbjct: 150 KMVDEAIKLF---EEMPLKQIFPDVVTY 174
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI PN T IL+D C G++ A V+ + +GYQ D + +ING
Sbjct: 283 ITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMING 342
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C+ G + AL LL + ED++ PD V Y
Sbjct: 343 LCKEGFLDEALSLLSKMEDNKCT---PDGVTY 371
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN VT N L+D Y + ++N A +F TI RG P+V ++ +ING C+ + A
Sbjct: 154 VEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAA 213
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L + +V PD V Y+
Sbjct: 214 NLFKEMHSKNMV---PDTVAYN 232
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 42/68 (61%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G N +T N L+D C Q++ A ++ I+ +G +P+++T+ L++G C+ G
Sbjct: 253 EMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNG 312
Query: 73 QIRPALQL 80
++R A ++
Sbjct: 313 RLRDAQEV 320
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M + I+PN VT N LID C G+I++A + + RG PD+ T
Sbjct: 74 IKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 133
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++L++ C+ A+ LL + +D L+P++ Y+
Sbjct: 134 YSSLLDALCKNHPGDKAIALLTKLKDQ---GLQPNMYTYT 170
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN VT + L+D YC + ++N A S+F + + G PD+ ++ LINGFC++
Sbjct: 17 MMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKM 76
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A+ L E+ ++ P+VV Y+
Sbjct: 77 TDAAMNLF---EEMHCRKIIPNVVTYN 100
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + S+ + M G+ P+ + NILI+ +C + + A ++F + R P+V T
Sbjct: 39 VKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVT 98
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LI+G C+ G+I AL+L+ D PD++ YS
Sbjct: 99 YNSLIDGLCKSGKISYALKLVDEMHDR---GQPPDIITYS 135
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I+L +++ +G+ PN T ILI+ C G+ A ++F + +GY +V T+ +I+
Sbjct: 150 AIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIH 209
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G AL +L + E++ + P+ V Y
Sbjct: 210 VFCNNGMFGEALAMLSKMEENGCI---PNAVTYE 240
>Medtr3g030490.1 | PPR superfamily protein, putative | LC |
chr3:9657702-9656824 | 20130731
Length = 222
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 24/112 (21%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT------ 60
++ L Q + GI P+ VT +IL++ YC+L +NF FS+ A I GY+ + T
Sbjct: 8 LMWLFRQFEFNGITPSIVTLSILMNFYCNLRGMNFFFSILAKILMMGYELNAITLTTFTK 67
Query: 61 ------------FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+A L+NG C+M + R +Q+ R+ + + DVV+YS
Sbjct: 68 GMCLKRSSSRMSYAILMNGLCKMWETRAVMQMPRK------IWVNTDVVMYS 113
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I+L +++ +GI PN T +ILID C G++ A +F + +GY+ ++T+ +IN
Sbjct: 202 AIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMIN 261
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C G A+ LL + ED+ + P+ V Y+
Sbjct: 262 GLCLEGLFDEAMTLLEKMEDNGCI---PNAVTYA 292
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 24 VTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRR 83
VT N L+D YC ++N A +VF I KR P VF++ +ING C++ + AL L
Sbjct: 82 VTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTE 141
Query: 84 AEDDELVQLKPDVVIYS 100
+ KP+ V Y+
Sbjct: 142 ------MHCKPNTVTYN 152
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K PN VT N LID C G+I+ A+ + + RG DV T
Sbjct: 129 IKMVDEALNLFTEMHCK---PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVIT 185
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + ++ C+ Q+ A+ L+++ +D ++P++ YS
Sbjct: 186 YNSFLHALCKNHQVDKAIALVKKIKDQ---GIQPNINTYS 222
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M+ KG +PN +T N LID YC ++ A + + + +G PD++T+++LI+G C
Sbjct: 484 LFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGEC 543
Query: 70 QMGQIRPALQL 80
+G++ AL+L
Sbjct: 544 IVGRVDEALKL 554
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ Y + + M KG+ PN VT + I+ YC G + A +F + K+G P++ T
Sbjct: 440 LHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIIT 499
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ TLI+ +C+ +++ A ++ E++ L PD+ YS
Sbjct: 500 YNTLIDAYCKKEKVKQAHKI-----KSEMINKGLLPDLYTYS 536
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ KG+ N V N +D YC G+++ A + A + K+G DVFT+ L NG C++
Sbjct: 382 EMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLH 441
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ A +L + +V+ +KP+VV ++
Sbjct: 442 RYDEAKCIL-----NSMVEKGVKPNVVTFT 466
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++P+ VT L+D YC + ++N A VF I + G PD T++ +INGFC++
Sbjct: 230 MMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKM 289
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ AL L DE+ + + P+ V Y+
Sbjct: 290 VDEALSLF-----DEMRRRGIAPNTVTYN 313
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K +SL +M+ +GI PN VT N LID C G+I +A+ + T+ G D+FT
Sbjct: 287 IKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFT 346
Query: 61 FATLINGFCQMGQIRPALQ 79
+ +LI+ C+ I +Q
Sbjct: 347 YNSLIDALCKNHHIDQGIQ 365
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ L H+M LK I + T NIL+D C G + A ++ A + K G PDV T+
Sbjct: 184 QFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYG 243
Query: 63 TLINGFCQMGQIRPA 77
+L++G+C + ++ A
Sbjct: 244 SLMDGYCLVNEVNKA 258
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH +IS QM G+ P+ T +I+I+ +C + ++ A S+F +R+RG P+ T+
Sbjct: 259 KHVFNIIS---QM---GVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTY 312
Query: 62 ATLINGFCQMGQIRPALQLL 81
+LI+G C+ G+I A +L+
Sbjct: 313 NSLIDGLCKSGRIPYAWELV 332
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M K I P+ VT + LI +C +GQ AF +F + + DV+TF L++
Sbjct: 155 GLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDAL 214
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G ++ A LL + ++ PDVV Y
Sbjct: 215 CKEGDVKVAKNLLAVMMKEGVI---PDVVTYG 243
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K V+S QM+ I PN T N+++ YC LG++N A V ++ G P+V T
Sbjct: 198 LKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVT 257
Query: 61 FATLINGFCQMGQIRPALQL 80
F +LI+G+C G + AL++
Sbjct: 258 FNSLISGYCDKGLLGLALKV 277
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G+ PN VT N LI+ +C G+++ A VF+ ++ P+V T+ TLINGF Q G
Sbjct: 282 MGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGN 341
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L E+ E ++K D++ Y+
Sbjct: 342 SEMGIGLF---EEMERNKVKADILTYN 365
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 11 SHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQ 70
+HQ++ +GI PN T +L+D C G++ A +V+ + +GY DV + ++N C+
Sbjct: 162 NHQIKDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNVMVNWLCK 221
Query: 71 MGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G AL +L + E + PDVV Y
Sbjct: 222 EGLFDEALSILSKMEHNNCT---PDVVTYE 248
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ +G+ PN VT N LI+ C+ G++ A ++ + G +P++ T+ LINGFC+
Sbjct: 298 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK 357
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A ++L ELV P+V+ ++
Sbjct: 358 MMKEATKVLDDVSKQELV---PNVITFN 382
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M I PN VT N LID +C + A F ++K+G +P++ T+ +LING C G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322
Query: 73 QIRPALQLLRRAEDDELV--QLKPDVVIYS 100
++ A+ L D++V LKP++V Y+
Sbjct: 323 KLEEAIDLW-----DKMVGLGLKPNIVTYN 347
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
++PN +T N +ID YC G + FS+ +++ + G P+V T+ LI G C+ ++ A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAK 433
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+LL E+ LK DVV Y+
Sbjct: 434 ELLNEMENK---GLKGDVVTYN 452
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M G+ PN VT N L+D YC G++ A +V + K QP+V T+ LI G+C
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYC 529
Query: 70 QMGQIRPALQLL 81
++ ++ A LL
Sbjct: 530 KINKLEAANGLL 541
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M+ KG+ + VT NILID C + A + + G +P+ T+ TL++G+C
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+++ AL + +R E + + +P+VV Y+
Sbjct: 495 MEGKLKAALNVRKRMEKE---RKQPNVVTYN 522
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M I PN VT N LID +C + A F ++K+G +P++ T+ +LING C G
Sbjct: 129 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 188
Query: 73 QIRPALQLLRRAEDDELV--QLKPDVVIYS 100
++ A+ L D++V LKP++V Y+
Sbjct: 189 KLEEAIDLW-----DKMVGLGLKPNIVTYN 213
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ +G+ PN VT N LI+ C+ G++ A ++ + G +P++ T+ LINGFC+
Sbjct: 164 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK 223
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A ++ ELV P+V+ ++
Sbjct: 224 MMKEATKVFDDVSKQELV---PNVITFN 248
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
++PN +T N +ID YC G + FS+ +++ G P+V T+ LI G C+ ++ A
Sbjct: 240 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 299
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+LL E+ LK DVV Y+
Sbjct: 300 ELLNEMENK---GLKGDVVTYN 318
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M G+ PN VT N L+D YC G++ A +V + K QP+V T+ LI G+C
Sbjct: 336 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 395
Query: 70 QMGQIRPALQLL 81
++ ++ A LL
Sbjct: 396 KINKLEAANGLL 407
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M+ KG+ + VT NILID C + A + + G +P+ T+ TL++G+C
Sbjct: 301 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 360
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+++ AL + R E + + +P+VV Y+
Sbjct: 361 MEGKLKAALNVRTRMEKE---RKQPNVVTYN 388
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L +M G+ PN VT N LI+ +C + A VF + K+ P+V TF T+I+
Sbjct: 194 IDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 253
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+C+ G + L D+ ++ P+V Y+
Sbjct: 254 YCKEGMMEEGFSLCSSMLDEGIL---PNVSTYN 283
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M I PN VT N LID +C + A F ++K+G +P++ T+ +LING C G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322
Query: 73 QIRPALQLLRRAEDDELV--QLKPDVVIYS 100
++ A+ L D++V LKP++V Y+
Sbjct: 323 KLEEAIDLW-----DKMVGLGLKPNIVTYN 347
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ +G+ PN VT N LI+ C+ G++ A ++ + G +P++ T+ LINGFC+
Sbjct: 298 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK 357
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A ++ ELV P+V+ ++
Sbjct: 358 MMKEATKVFDDVSKQELV---PNVITFN 382
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
++PN +T N +ID YC G + FS+ +++ G P+V T+ LI G C+ ++ A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+LL E+ LK DVV Y+
Sbjct: 434 ELLNEMENK---GLKGDVVTYN 452
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M G+ PN VT N L+D YC G++ A +V + K QP+V T+ LI G+C
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529
Query: 70 QMGQIRPALQLL 81
++ ++ A LL
Sbjct: 530 KINKLEAANGLL 541
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M+ KG+ + VT NILID C + A + + G +P+ T+ TL++G+C
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+++ AL + R E + + +P+VV Y+
Sbjct: 495 MEGKLKAALNVRTRMEKE---RKQPNVVTYN 522
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L +M G+ PN VT N LI+ +C + A VF + K+ P+V TF T+I+
Sbjct: 328 IDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 387
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+C+ G + L D+ ++ P+V Y+
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGIL---PNVSTYN 417
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
MQL+G PN VT NILI+ +C G I A + + +PD+FTF+ +I+G C++ +
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIYS 100
A + +E+V+ + P+ +IY+
Sbjct: 61 TEEAFECF-----NEMVEWGVNPNAIIYN 84
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +MQ +GI P+ + N LI +C + ++ A +F ++ K G+ PD +T++ I
Sbjct: 100 VKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAA 159
Query: 68 FCQMGQIRPALQL 80
+ G++ A ++
Sbjct: 160 LSESGRLEEAKKM 172
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++M G+ PN + NILI C +G+ + + +++ G PD+++
Sbjct: 58 LKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYS 117
Query: 61 FATLINGFCQMGQIRPALQL 80
+ LI FC+M ++ A +L
Sbjct: 118 YNALIQIFCRMNKVEKAKKL 137
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M LK I P+ T NIL+D +C G A +V A + K G PDV T+ +L++G+C
Sbjct: 147 LFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYC 206
Query: 70 QMGQIRPALQLL 81
+ ++ A +L
Sbjct: 207 LVNKVNKAKHVL 218
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ +T N LI C G++ A + G+ D ++ TLING C+MG+ A
Sbjct: 15 GFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTTEA 74
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
LQ+LR+ D +LV DVV+YS
Sbjct: 75 LQVLRKI-DGKLVN--TDVVMYS 94
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M K I P+ VT + LI +C +GQ+ AF +F + + PDV+TF L++ FC
Sbjct: 112 LYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFC 171
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ G + A ++ + ++ PDVV Y
Sbjct: 172 KEGNTKEAKNVIAMMMKEGVI---PDVVTY 198
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+ +++ GI P T NILID C ++ A +F + +GY+ V+T+ +ING
Sbjct: 295 IAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNIMING 354
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C G A+ LL + E++ + PDVV Y
Sbjct: 355 LCLEGLFDQAMILLEKMEENGCI---PDVVTY 383
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K VI++ M +G++P+ VT L+D YC + ++N A V + I + G P+ ++
Sbjct: 177 KEAKNVIAM---MMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSY 233
Query: 62 ATLINGFCQMGQIRPALQLL 81
+INGFC++ + AL L
Sbjct: 234 NIIINGFCKIKMVDEALNLF 253
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 39 INFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
++FAFS+F I K G+QPD+ TF TLI G C G+++ AL
Sbjct: 1 MDFAFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHF 42
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+++ G++P+ V+ NIL++ YC G +N + KRG +P TF TLIN FC+ G
Sbjct: 347 KLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETG 406
Query: 73 QIRPALQLLRR 83
+ A + +++
Sbjct: 407 DLNQAERWVKK 417
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + ++PN VT N LID YC +G I+ AF + A + + +V T+ L++G C +G
Sbjct: 214 EMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLLSGLCGLG 273
Query: 73 QIRPALQLLRRAE 85
++ A ++L E
Sbjct: 274 RLEDAKRVLLEME 286
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + L + M+ GI P N+++ C +I A VF + +R P+ T
Sbjct: 167 LKDLNKCFELINLMEKDGIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVT 226
Query: 61 FATLINGFCQMGQIRPALQLLRR 83
F TLI+G+C++G I A +L R
Sbjct: 227 FNTLIDGYCKVGGIDEAFRLRAR 249
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 11 SHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQ 70
+ +M+ +G+ P++VT N LI+ +C G +N A + ++G P + T+ +LING+
Sbjct: 380 AEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGM 439
Query: 71 MGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ E+ +KP+V Y
Sbjct: 440 TCDFVRCFEIFEEIENK---GMKPNVKSYG 466
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 62/100 (62%), Gaps = 11/100 (11%)
Query: 4 YSTVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S V SL +Q+K G +P+ V N L+D +C + + A +F ++ RG+ P+V ++
Sbjct: 93 WSLVKSL---IQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYT 149
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
TLING+C +G IR A+++ DE+++ L+P+ + YS
Sbjct: 150 TLINGYCSVGGIRDAMKVF-----DEMLESGLEPNSMTYS 184
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G+ P VT N+LI C L + N AF VF + G PD T+ ++ G C+ Q
Sbjct: 458 MPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQ 517
Query: 74 IRPA 77
I A
Sbjct: 518 IEEA 521
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y + L H M +G+ PN ++ ++DC+ +G + A ++ I RG+ F T
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+I+G C+MG++ A + R ++ + L PD + Y
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKE---LGLSPDEITY 545
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + + +M G+ N V N LI YC LGQ+ A VF + +PD ++
Sbjct: 345 MGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYS 404
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TL++G+C+ G++ A L D + P VV Y+
Sbjct: 405 YNTLLDGYCREGKVSKAFMLCEEMLGDGIT---PTVVTYN 441
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M +G+ PN VT N L++ Y G V + +RG +V T L+ G+C+
Sbjct: 250 EKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKK 309
Query: 72 GQIRPALQLLRRAEDDELV 90
G++ A +LLR E+DEL+
Sbjct: 310 GKMDEAEKLLREVEEDELL 328
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M KG++PN N LI+ C LG I+ A +F + ++G P+ T+ LI +C
Sbjct: 774 LRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833
Query: 70 QMGQIRPALQLLRRAEDD 87
++G + A +L + ++
Sbjct: 834 RIGDLDKASRLREKMTEE 851
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 20 MPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQ 79
+ N + NI ID C G+++ A SV + + RG+ PD FT+ TLI+ G + A +
Sbjct: 714 LSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFK 773
Query: 80 LLRRAEDDELVQ--LKPDVVIYS 100
L DE+++ L P++ IY+
Sbjct: 774 L-----RDEMLEKGLIPNITIYN 791
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G + V N +I C +G++ A +VF +++ G PD T+ TL +G+C+ G ++
Sbjct: 501 RGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQE 560
Query: 77 ALQL 80
A Q+
Sbjct: 561 AFQI 564
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ +G+MPN LI YC LGQ++ S+ + QP+ T+ +I+G+C+MG
Sbjct: 691 EMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMG 750
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ A +LL +E++ + PD V Y+
Sbjct: 751 NTKEATKLL-----NEMIANGISPDTVTYT 775
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ +M I PN +T I+ID YC +G A + + G PD T+ L G+
Sbjct: 722 SILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGY 781
Query: 69 CQMGQIRPALQ 79
C+ ++ LQ
Sbjct: 782 CKENELEETLQ 792
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG PN N LID Y G ++ A V + +G +P+ T TL+ GFC+
Sbjct: 340 EMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTN 399
Query: 73 QIRPALQLL 81
Q+ A Q+L
Sbjct: 400 QMEQAEQVL 408
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG+ P+ + N L+ +++ +F VF + + G DV+T+AT IN +C+ G+I
Sbjct: 204 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 263
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + + ++ P+VV Y+
Sbjct: 264 AVGLFLKMGEGGVL---PNVVTYN 284
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ +G++PN T LID +C G A+ + + G+ P+V T+ ++NG C
Sbjct: 326 LLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLC 385
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++L ED LKPD Y+
Sbjct: 386 KRGRVQEAYKML---EDGFQNGLKPDRFTYN 413
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN + +I+ C G I AF + + +G++P+V+T +LI+G C+ G A
Sbjct: 228 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 287
Query: 78 LQL---LRRAEDDELVQLKPDVVIYS 100
+L L R+E+ KP+V+ Y+
Sbjct: 288 FRLFLKLVRSENH-----KPNVLTYT 308
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVF-ATIRKRGYQPDVFTFATLINGFCQM 71
+M KG PN T LID C G AF +F +R ++P+V T+ +I+G+C+
Sbjct: 258 EMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRE 317
Query: 72 GQIRPALQLLRRAEDDELV 90
++ A LL R ++ LV
Sbjct: 318 DKLNRAEMLLSRMKEQGLV 336
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M ++G+ P+ V+ +++ YC +G I A + + +RG+ D TF +I+ FC
Sbjct: 150 LFEEMCVRGVQPDSVSYRVMVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFC 209
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G AL RR D + L+P+++ ++
Sbjct: 210 EKGYATRALWYFRRLVD---MGLEPNLINFT 237
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ L + M +G PN T N +++ C G++ A+ + + G +PD FT+
Sbjct: 354 NFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYN 413
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C+ IR AL L + ++PD+ Y+
Sbjct: 414 ILMSEHCKQANIRQALVLFNKMVKS---GIQPDIHSYT 448
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN VT + L+D YC LG++ A V + K P+V TF+++ING+ + G + A+
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516
Query: 79 QLLRRAEDDELVQ--LKPDVVIYS 100
+LR E+VQ + P+ ++Y+
Sbjct: 517 DVLR-----EMVQRNVMPNTIVYA 535
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +G+ + +T NIL+ YC +G + +A V + G DV TLI+G+
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G + A +L+ E+ +K D+V Y+
Sbjct: 243 CEAGLMSQATELI---ENSWRSDVKIDIVTYN 271
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
Q ++K + P VT LI YC + + S++ + G PDV T ++++ GFC+ G
Sbjct: 311 QNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHG 370
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L R + + L P+ V Y+
Sbjct: 371 KLTEAAVLFREMYE---MGLDPNHVSYA 395
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + + +M+L+G++P+ T NI+ID +C G + A F + + G PD+FTF L
Sbjct: 654 AQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNIL 713
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ------LKPDVVIYS 100
+ G+C+ A ++R D++V L PD+ Y+
Sbjct: 714 VGGYCK------AFDMVRA---DDIVNKMYPYGLYPDITTYN 746
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y T+ SL M KG P+ +T N +I +C G++ S+F + K G +PDVFT+
Sbjct: 268 YGTIWSLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNV 327
Query: 64 LINGFCQMGQIRPALQLLR 82
+ING C G A+ LR
Sbjct: 328 IINGCCVGGNTSVAVGWLR 346
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G +PN N LI +C+LG++ A V +R RG PD FTF +I+ FC+ G
Sbjct: 627 EMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQG 686
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A+ D + L PD+ ++
Sbjct: 687 NMKSAIDAFL---DMHRIGLMPDIFTFN 711
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ +GI P+ V + LID G ++ A+ VF + G+ P+ F + +LI GFC +G
Sbjct: 592 EMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLG 651
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL++ ++ L L PD ++
Sbjct: 652 RMAQALKV---EKEMRLRGLLPDTFTFN 676
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M + + + VT N LI+ YC +G +N A + + G P+ FT+ LI+GFC
Sbjct: 360 LLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFC 419
Query: 70 QMGQIRPALQLL 81
+ ++ A +LL
Sbjct: 420 KTSELESAKELL 431
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M++KG++P+ T N LI YC G A SV + + G D+ ++ +LI GFC+
Sbjct: 224 NEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKE 283
Query: 72 GQIRPALQLLRRAED 86
G++R A+++ +D
Sbjct: 284 GKMREAMRMFGEIKD 298
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ ++ L H++ +G+ P+ VT N+ IDC+C G ++ A + + K P V T
Sbjct: 603 VNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVT 662
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDD 87
+ TL++GFC+ + A+ L + E +
Sbjct: 663 YTTLVDGFCKEERPDDAILLFKEMEKN 689
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ +G++PN T LID +C G A+ + + G+ P++ T+ ++NG C
Sbjct: 308 LLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLC 367
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++L ED LKPD Y+
Sbjct: 368 KRGRVQEAYKML---EDGFQNGLKPDKFTYN 395
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN + +I+ C G I AF + + +G++P+V+T +LI+G C+ G A
Sbjct: 210 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 269
Query: 78 LQL---LRRAEDDELVQLKPDVVIYS 100
+L L R+E+ KP+V+ Y+
Sbjct: 270 FRLFLKLVRSENH-----KPNVLTYT 290
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVF-ATIRKRGYQPDVFTFATLINGFCQM 71
+M KG PN T LID C G AF +F +R ++P+V T+ +I+G+C+
Sbjct: 240 EMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRE 299
Query: 72 GQIRPALQLLRRAEDDELV 90
++ A LL R ++ LV
Sbjct: 300 DKLNRAEMLLSRMKEQGLV 318
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ L + M +G PN T N +++ C G++ A+ + + G +PD FT+
Sbjct: 336 NFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYN 395
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C+ IR AL L + + ++PD+ Y+
Sbjct: 396 ILMSEHCKQENIRQALALFNKMLK---IGIQPDIHSYT 430
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G +PN V N++ID YC G + A VF ++ +G+ P + T+ LI+GFC+ G+ +
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294
Query: 78 LQLLRR 83
QLL
Sbjct: 295 DQLLNE 300
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ +S ++M++ P+ T + +ID Y ++ A +F + K+ Y+P+V + +L
Sbjct: 537 TDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSL 596
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
INGFC++ + A ++ R + L+P+VV Y+
Sbjct: 597 INGFCKIADMSRAEKVFRAMQS---FNLEPNVVTYT 629
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ V L ++M + G+ N N +ID G ++ A + + + G +PD+ T+
Sbjct: 291 FQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNI 350
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELV 90
LIN C G+I+ A + L RA++ L+
Sbjct: 351 LINFSCSGGRIKEAEEFLERAKERTLL 377
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN VT + L+D YC LG++ A V ++K P+V TF+++ING+ + G + A+
Sbjct: 451 LAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAV 510
Query: 79 QLLRRAEDDELVQ--LKPDVVIYS 100
+LR E+VQ + P+ +Y+
Sbjct: 511 DVLR-----EMVQRNIMPNTFVYA 529
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN VT N +I+ YC G I A + ++ G P+ T+ LI G C+ G ++ A
Sbjct: 659 GLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKA 718
Query: 78 LQLLRR 83
+L
Sbjct: 719 ADVLNE 724
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +G+ + +T NIL+ YC +G + +A V + G DV TLI+G+
Sbjct: 177 GLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVMYNLVDGGVTKDVIGLNTLIDGY 236
Query: 69 CQMGQIRPALQLL-RRAEDDELVQLKPDVVIYS 100
C+ G + A+ L+ +R D ++ DVV Y+
Sbjct: 237 CECGLMSQAMDLMEKRWRGD----VEIDVVTYN 265
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+PN VT ++ YC G+I AF +F ++ G + D F F LI+GF ++G
Sbjct: 293 KMIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVG 352
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
QLL E + P+VV Y+
Sbjct: 353 DFDRVFQLLVEMEKR---GIGPNVVTYN 377
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M KGI +FV+ ILID + LG + +F+ A + K G P+ T+ +++ +C+
Sbjct: 257 REMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKK 316
Query: 72 GQIRPALQLLRRAED 86
G+I A L R +D
Sbjct: 317 GRIEEAFGLFVRMKD 331
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M+ Y V +L M ++PN +T +ID YC +G+IN A VF RK
Sbjct: 451 MQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSISS-YAC 509
Query: 61 FATLINGFCQMGQIRPALQLL 81
+ ++ING C+ G + A++ L
Sbjct: 510 YNSIINGLCKKGMVEMAIEAL 530
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S +L ++M + ++P+ + IL+ C Q+N A +F + +G+ PD FT+ TL
Sbjct: 199 SIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTL 258
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+N C+ ++R A +LL R ++ PD+V Y+
Sbjct: 259 LNSLCRKKKLREAYKLLCRM---KVKGCNPDIVHYN 291
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 3 HYSTVI-------------SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATI 49
HY+TVI + MQ G +PN V+ L++ CHLG ++ A +
Sbjct: 289 HYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEM 348
Query: 50 RKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRA 84
+G+ P L+ GFC +G+I A +L ++
Sbjct: 349 LSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKS 383
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G++PN T NIL+ YC L + A V + PDV+T+ T++ G C G+
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGK 60
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I A++L ++ E ++L PD V Y+
Sbjct: 61 IDEAVRL---RDEMESLRLVPDGVTYN 84
>Medtr4g079260.1 | PPR containing plant-like protein | LC |
chr4:30600131-30604187 | 20130731
Length = 476
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++ VI + + M KG P V+ N LI+ +C G ++ A+S+F ++ RG QPD+ T+
Sbjct: 312 KLFAKVIDIFNLMCSKGFYPEVVSCNYLINSFCKSGYLSSAWSMFHHMQNRGLQPDIVTY 371
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDEL 89
L QM ++ ++LL E+ ++
Sbjct: 372 NYLCCALLQMNKVDEVMKLLPTMEEHKI 399
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 11 SHQM----QLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+H+M + G+ PN VT N LID Y +G A + I+ G PDV ++ T+I
Sbjct: 677 AHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIK 736
Query: 67 GFCQMGQIRPALQLL 81
GFC+ G ++ A+++L
Sbjct: 737 GFCKKGLVQEAIRIL 751
>Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:48037-47705 | 20130731
Length = 110
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+SL ++M + PN +T + LID C G+ + A+ + + G P++FT+ +LIN
Sbjct: 5 ALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSLIN 64
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ Q+ A+ L+ + +D ++PD+ Y+
Sbjct: 65 SLCKNYQVDKAIALVNKIKDQ---GIQPDMFAYN 95
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S L +M G PN T N LI+ C Q++ A ++ I+ +G QPD+F +
Sbjct: 37 FSCAWELVDEMHDNGQPPNIFTYNSLINSLCKNYQVDKAIALVNKIKDQGIQPDMFAYNI 96
Query: 64 LINGFCQMGQIRPA 77
LI+G C+ G+++ A
Sbjct: 97 LIDGLCKGGRLQNA 110
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K I+L +MQ K I+P+ VT + LID +C +I+ A ++ + RG PD+
Sbjct: 8 IKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPDIII 67
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++++ C+ Q+ A+ LL + ++ ++P V Y+
Sbjct: 68 YNSILDALCKNHQVDKAIALLTKFKNQ---GIQPSVYTYT 104
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L + + +GI P+ T ILID C ++ A ++F + +GY V T+ +I+G
Sbjct: 85 IALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHG 144
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C MG AL LL +D+ + P+VV Y
Sbjct: 145 LCNMGLFDEALALLLEMKDNSCI---PNVVTYE 174
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L ++M +G P+ + N ++D C Q++ A ++ + +G QP V+T+ L
Sbjct: 47 SHALNLVNEMHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTIL 106
Query: 65 INGFCQMGQIRPALQLLR 82
I+G C+ ++ A + +
Sbjct: 107 IDGLCKGERLEDARNIFK 124
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ KG PN + +LI C ++ A +F +++ G Q DV T+ TLI+GFC
Sbjct: 310 LLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFC 369
Query: 70 QMGQIRPALQLLRRAEDD 87
+ G+I+ +LL + + +
Sbjct: 370 KWGKIKRGYELLDQMKQE 387
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H I+L +++ +GI PN T IL+ C G++ A VF + GY DV+ +
Sbjct: 157 HAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRSGKLEDARKVFEDL---GYNLDVYAYT 213
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I GFC G L LL + E++ + PD Y
Sbjct: 214 VMIQGFCDKGLFDEVLALLSKMEENGCI---PDAKTYE 248
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I ++M + I PN T IL+D +C G++ A +V A + K+G +PDV T+ +L++G
Sbjct: 30 IDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYNSLMDG 89
Query: 68 FCQMGQIRPA 77
+C + ++ A
Sbjct: 90 YCIVKEVNKA 99
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT + LI +C +G++ A F + P+V+TF L++GFC+ G+++ A +
Sbjct: 8 PNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKNV 67
Query: 81 LRRAEDDELVQLKPDVVIYS 100
L +KPDVV Y+
Sbjct: 68 LAMMMKQ---GIKPDVVTYN 84
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I P+ T N L++ I A VF +++ +PDV T+ T+I G+C+ G+
Sbjct: 203 MNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGK 262
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIY 99
R A++++R E++ L+PDVV Y
Sbjct: 263 TRKAIEMVREM---EVINLEPDVVSY 285
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++ N V + LID G+++ A VF + ++G PD + + LI+G C+ G+I A
Sbjct: 417 GVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDA 476
Query: 78 LQLLRRAEDDELVQ 91
L L++R E D Q
Sbjct: 477 LALVKRMERDGCEQ 490
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L M G N LIDCY G + A +F ++ G +PD T++ ++NG
Sbjct: 338 ALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGL 397
Query: 69 CQMGQIRPALQLLRRAEDDELV 90
C+ G++ AL + ++ +V
Sbjct: 398 CKSGRVEEALSYFQFCNENGVV 419
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I P+ T N L++ I A VF +++ +PDV T+ T+I G+C+ G+
Sbjct: 203 MNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGK 262
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIY 99
R A++++R E++ L+PDVV Y
Sbjct: 263 TRKAIEMVREM---EVINLEPDVVSY 285
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++ N V + LID G+++ A VF + ++G PD + + LI+G C+ G+I A
Sbjct: 417 GVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDA 476
Query: 78 LQLLRRAEDDELVQ 91
L L++R E D Q
Sbjct: 477 LALVKRMERDGCEQ 490
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L M G N LIDCY G + A +F ++ G +PD T++ ++NG
Sbjct: 338 ALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGL 397
Query: 69 CQMGQIRPALQLLRRAEDDELV 90
C+ G++ AL + ++ +V
Sbjct: 398 CKSGRVEEALSYFQFCNENGVV 419
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K S + L +M+ G P+ T NILI Y G+++ A +F + QPDV +
Sbjct: 443 LKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVIS 502
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LIN + G + A + ++ L PDVV YS
Sbjct: 503 YNSLINCLGKNGDVDEAHMRFKEMQEK---GLNPDVVTYS 539
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M+ G+ P+ VT N L+D YC +I A+ VF +R++ PDV T+ ++I G +
Sbjct: 220 NEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLV 279
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GQ A +L+ ++ + PDV Y+
Sbjct: 280 GQPDKARDVLKEMKE---YGVYPDVPAYN 305
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G++PN V+ ++ + G ++ A VF + RG+ PDV ++ L++GFC++G
Sbjct: 216 EMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLG 275
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIY 99
++ A++++ ED+ ++P+ V Y
Sbjct: 276 KLVDAIRVMDIMEDN---GVEPNEVTY 299
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M G PN V NILI+ + G+I+FA +F + K G +PD+ ++ L+ C
Sbjct: 925 EEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCIT 984
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+I A+Q E+ +L L PD V Y+
Sbjct: 985 GRIDEAVQYF---EELKLTGLDPDTVSYN 1010
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ VT N+L+ CY GQI+ A + + + +G +PDV +LIN + G++ A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
++ R ++ ++L P VV Y+
Sbjct: 570 WKMFGRLKN---LKLAPTVVTYN 589
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
TV ++M++ G P+ VT ILI+ C G ++ AF + + +G P++ T+ T+
Sbjct: 357 ETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
I G + ++ AL+LL E+ E + +KP Y
Sbjct: 417 ICGLLKARRLDEALELL---ENMESLGVKPTAFSY 448
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G P+ +T +LID C G+++ A ++ +R + PD T+ TL++ F ++G
Sbjct: 295 EMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVG 354
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + E D PDVV Y+
Sbjct: 355 DLETVKRFWNEMEVDGYA---PDVVTYT 379
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ ++++ +M K I N NILID + G + A + +RK G QPD+ T+ + I
Sbjct: 706 SALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFI 765
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
N C+ G ++ A Q+++ E +KP++ Y+
Sbjct: 766 NACCKAGDMQNATQVIKEMEAR---GIKPNLKTYT 797
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + +S M+ GI N T ++L + + L AFSVF I K G +PDV + +
Sbjct: 495 SKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNI 554
Query: 65 INGFCQMGQIRPALQLLRRAE 85
+ FC MG + A+ ++++ +
Sbjct: 555 VKAFCGMGNMDRAICIVKQMQ 575
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M L G+ PN T L+ Y LG AF F ++ G + DV+T+ L+ C+ G
Sbjct: 643 EMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSG 702
Query: 73 QIRPALQLLRRAEDDEL 89
+++ AL + + ++
Sbjct: 703 RMQSALAVTKEMSSKKI 719
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I+P+ +T N+LI+ +C G+ + A +V ++ G P+VF ++ L++G C+ G+++ A
Sbjct: 305 IVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAK 364
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+L + LKPD + Y+
Sbjct: 365 GVLAEMKSS---GLKPDAITYT 383
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G PN + L+D C G++ A V A ++ G +PD T+ +LIN F + GQ
Sbjct: 335 MKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQ 394
Query: 74 IRPALQLLRRAEDDE 88
I A++LL ++++
Sbjct: 395 IDEAIELLTEMKEND 409
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQ-PDVFTFATLINGFCQMGQIRPALQ 79
PN NIL+ +C G I+ AF V +R Y P+V T++TL++G C+ G+++ A +
Sbjct: 235 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFE 294
Query: 80 LLRRAEDDELVQLKPDVVIYS 100
L + Q+ PD + Y+
Sbjct: 295 LFEEMVSKD--QIVPDPLTYN 313
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ + + +M G PN VT NI+I+ +C + A+ + ++G++PD+ T++TLI
Sbjct: 485 SAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLI 544
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+G CQ G++ LR KPD+ +++
Sbjct: 545 DGLCQ-GKMNENDTALRLCYQFLAKGFKPDITMHN 578
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M T + L +Q KG P+ NI+I C G++ +A ++ +RKR ++ T
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVT 610
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
T++ GF ++G A ++ + +D LKPD++ Y+
Sbjct: 611 HNTIMEGFYKIGDCEKASKIWAQISED---GLKPDIISYN 647
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ + + +M G PN VT NI+I+ +C + A+ + ++G++PD+ T++TLI
Sbjct: 485 SAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLI 544
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+G CQ G++ LR KPD+ +++
Sbjct: 545 DGLCQ-GKMNENDTALRLCYQFLAKGFKPDITMHN 578
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M T + L +Q KG P+ NI+I C G++ +A ++ +RKR ++ T
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVT 610
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
T++ GF ++G A ++ + +D LKPD++ Y+
Sbjct: 611 HNTIMEGFYKIGDCEKASKIWAQISED---GLKPDIISYN 647
>Medtr1g034420.1 | PPR superfamily protein | LC |
chr1:12536372-12535170 | 20130731
Length = 400
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ PN T ILIDC+C G ++ AF +F I K G++P T L+ G C GQI A+
Sbjct: 146 VFPNVDTWKILIDCHCATGNMSSAFCLFHNIIKAGHRPTASTLNYLLQGLCDRGQISKAI 205
>Medtr6g079340.1 | PPR containing plant-like protein | LC |
chr6:29913512-29914444 | 20130731
Length = 181
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M I+L + + +GI P+ T IL+ C G++ A VF + +GY DV+
Sbjct: 55 MNDVDKAIALLTKFKDQGIQPSVYTYTILVKGLCRSGKLEDAQKVFEDLLVKGYNLDVYA 114
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +I GFC AL LL + E++ + PD Y
Sbjct: 115 YTVMIQGFCDKDLFDEALALLSKMEENGCI---PDAKTYE 151
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK +VI++ M G++PN VT +++ YC + ++N VF TI + G P+ +
Sbjct: 103 MKEAKSVIAM---MMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQS 159
Query: 61 FATLINGFCQMGQIRPALQLLR 82
+ +INGFC++ + AL L +
Sbjct: 160 YNIMINGFCKIKIVNEALILFK 181
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I P+ T N LI +C +GQ+ AF +F+ + + P V+TF L++G C
Sbjct: 39 LYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLC 98
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+++ A ++ D ++ P+VV Y+
Sbjct: 99 KEGKMKEAKSVIAMMMKDGVL---PNVVTYT 126
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L QM LK I P+ T IL+D C G++ A SV A + K G P+V T+ +++ G+C
Sbjct: 74 LFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYC 133
Query: 70 QMGQIRPALQLLR 82
+ ++ + R
Sbjct: 134 LVNEVNKTKHVFR 146
>Medtr1g042745.1 | PPR repeat protein | HC |
chr1:15994857-15994513 | 20130731
Length = 74
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY-QPDVFT 60
HYS V SLSH M K L +NFA+S+F IRK GY QPDV T
Sbjct: 6 NHYSVVSSLSHHMDRKS---------------SELSTMNFAYSLFNKIRKVGYHQPDVVT 50
Query: 61 FATLINGFCQMGQIRPALQL 80
F TL+ G C G + L
Sbjct: 51 FNTLLKGLCLNGDTNCYITL 70
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ + L +M G+ N + + L+ YC LG +N A +F + + G PDV F+
Sbjct: 305 NFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFS 364
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVI 98
LING ++G + A +L R +L+ ++P+V I
Sbjct: 365 VLINGCSKVGDMEKAYELYTRM---KLMGIQPNVFI 397
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI P+ +T LID C +I A + + ++ +G + DV ++ LI+GFC+M
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMH 653
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A + D + L P+ V+Y+
Sbjct: 654 DMESASKFFTELLD---IGLTPNTVVYN 678
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M KGI P+ V+ N LI +C G ++ A+S+ +I +RG +P+ T+ LI+GF
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509
Query: 69 CQMGQIRPA 77
+ G A
Sbjct: 510 FKKGDSERA 518
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G + +T N +ID + G ++ A + + + G PDV T+ +LI+G C+ +I
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGL 622
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
AL++ D + +K DVV YS
Sbjct: 623 ALEM---HSDMKYKGMKLDVVAYS 643
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN +T N LID +C G I+ A +F + + QP+V T TL++G C++G++ A++
Sbjct: 313 PNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEF 372
Query: 81 LRRAEDDELVQLKPDVVIYS 100
+ LK + V Y+
Sbjct: 373 FNEMKGK---GLKGNAVTYT 389
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I PN VT N L+D C +G++ A F ++ +G + + T+ LI+ FC +
Sbjct: 341 MNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNN 400
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIY 99
I A+Q DE++ PD ++Y
Sbjct: 401 IDKAMQYF-----DEMLSSGCSPDAIVY 423
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRG-------YQPDVFTFATLI 65
+M+ I P+ +T ILI+ +C +I+ A VF +R +G +PDV + TLI
Sbjct: 227 EMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEPDVVLYNTLI 286
Query: 66 NGFCQMGQ 73
NG C++G+
Sbjct: 287 NGLCKVGR 294
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 7 VISLSHQMQL-KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
++SL +M++ K PN VT N LID C G ++ +F+ + + +PDV T L+
Sbjct: 220 LLSLLEEMKVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALV 279
Query: 66 NGFCQMGQIRPALQLL 81
NG C++G++ A++
Sbjct: 280 NGMCKIGRVDSAVEFF 295
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + + P+ VT N L++ C +G+++ A F ++ +G + + T+ LI+GFC
Sbjct: 259 LFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFC 318
Query: 70 QMGQIRPALQLLRRAEDDELVQ--LKPDVVIY 99
+ I A+Q DE++ PD ++Y
Sbjct: 319 GVNNIVKAVQYF-----DEMLSSGCSPDTIVY 345
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ + M+ G+ PN +T NI+ID C +++ A S+F + + PD TF +LI+G
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G++ A L + D + + P+VV+Y+
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQI---PNVVVYT 521
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M+ +G+ + + N +ID +C G+++ A+ + ++ +G QP V T+ ++++G
Sbjct: 609 LFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLA 668
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ ++ A L A+ + + +VVIYS
Sbjct: 669 KIDRLDEAYMLFEEAKS---IGVDLNVVIYS 696
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +++ +G++P+ + +ILI G + +F ++++G DV + T+I+GF
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C+ G++ A QLL E+ + L+P VV Y
Sbjct: 633 CKSGKVDKAYQLL---EEMKTKGLQPTVVTY 660
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL +M+ + V N+ IDC+ +G+++ A+ F ++ +G PD T+ TLI
Sbjct: 258 LSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGV 317
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ ++ A++L E+ +L + P V Y+
Sbjct: 318 LCKARRLDEAVELF---EELDLNRSVPCVYAYN 347
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M++ G+ PN VT N +I+ YC G+ A +F T++ + +PD +T+ + I+ C+
Sbjct: 242 HMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKER 301
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I A +L + + LV P+ V Y+
Sbjct: 302 RIEEASGVLCKLLESGLV---PNAVTYN 326
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G++P+ + N LID +C G I+ AF + + PD TF TL+ G+C+ ++
Sbjct: 456 EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEE 515
Query: 77 ALQLLRRAEDDELVQ--LKPDVVIYS 100
A +LL DE+ + +KPD + Y+
Sbjct: 516 AKKLL-----DEMKERGIKPDHISYN 536
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+ + T N+LI +I A + +R++G +PDV T+ ING+C+ G
Sbjct: 347 EMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCG 406
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ AL L DE+V+ ++P V Y+
Sbjct: 407 NAKKALSLF-----DEMVEKNIRPTVETYT 431
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ KG+ P+ VT NI I+ YC G A S+F + ++ +P V T+ +LI+ F +
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRN 441
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A + +++ + ++ PD+++++
Sbjct: 442 RMSEAEEKFKKSIKEGML---PDIIMFN 466
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M I + VT NI+I+ C G+ A + G +P+V T+ T+ING+C G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++ + +D LKPD Y+
Sbjct: 267 KFEAASKIFKTMKDK---NLKPDCYTYN 291
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M ++P+ VT N L+ YC ++ A + +++RG +PD ++ TLI+G+
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543
Query: 70 QMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
+ G ++ AL++ DE++ L P ++ Y+
Sbjct: 544 KRGDMKDALEVF-----DEMLSLGFDPTLLTYN 571
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S I + ++M+ KG+ P+ +T N LI G+++ A + + ++G+ PD T+ +L
Sbjct: 286 SEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSL 345
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG C+ G+ AL LL E+ E+ P+ Y+
Sbjct: 346 MNGMCRKGETLAALALL---EEMEMKGCSPNTCTYN 378
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 5 STVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
S V + +M+ K + PN VT ILID C+ + A + + + G++PD F + T
Sbjct: 215 SLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNT 274
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ G+C + + A+++ R ++ ++PD++ Y+
Sbjct: 275 IMKGYCMLSRGSEAIEVYNRMKEK---GVEPDLITYN 308
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
++ +G P+ N ++ YC L + + A V+ ++++G +PD+ T+ TLI G + G+
Sbjct: 260 LEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGR 319
Query: 74 IRPALQLLR-RAEDDELVQLKPDVVIYS 100
+ A +LLR AE PD V Y+
Sbjct: 320 VSEAKKLLRVMAEKGHF----PDEVTYT 343
Score = 45.8 bits (107), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L +M++KG PN T N L+ C + A ++ ++ G + D+ ++AT +
Sbjct: 359 LALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRA 418
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C +G++ A ++ A + + + DV YS
Sbjct: 419 LCSVGRVADAYEVFDYAVESKSLS---DVAAYS 448
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I P+ + N++I+ C G +N A +F +R+RG+ P+V T+ +ING C+ ++ A
Sbjct: 144 IYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADAR 203
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
++L D +P+ + Y+
Sbjct: 204 RVLNEFCD---FGFEPNAITYT 222
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRG-YQPDVFTFATLIN 66
+ L +M GI P+ + NIL+ CY LG+ A VF I +RG P + ++ +IN
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C+ G + AL L R V P+V+ Y+
Sbjct: 157 GLCKNGYVNNALMLFRNLRRRGFV---PEVLTYN 187
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ +T N LID YC I+ A+++ +++ G PDV ++ +L +G + ++ +
Sbjct: 37 GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96
Query: 78 LQLLRRAEDDELVQ--LKPDVVIYS 100
L L DE++Q ++PDV Y+
Sbjct: 97 LDLF-----DEMLQSGIRPDVWSYN 116
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G+ PN V+ N L+ Y G N A VF I++ G++PDV ++ +L+N + +
Sbjct: 351 NMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRS 410
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A ++ + + + LKP++V Y+
Sbjct: 411 RKPQKAREIFKMIKRN---NLKPNIVSYN 436
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G+ PN V+ N L+ Y G N A VF I++ G++PDV ++ +L+N + +
Sbjct: 147 NMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRS 206
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A ++ + + + LKP++V Y+
Sbjct: 207 RKPQKAREIFKMIKRN---NLKPNIVSYN 232
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G+ PN V+ N L+ Y G N A VF I++ G++PDV ++ +L+N + +
Sbjct: 212 NMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRS 271
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A ++ + + + LKP++V Y+
Sbjct: 272 RKPQKAREIFKMIKRN---NLKPNIVSYN 297
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ M +G+ PN V+ N L+ Y G N A VF I++ G++PDV ++ +L+N + +
Sbjct: 106 NMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRS 165
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A ++ + + + LKP++V Y+
Sbjct: 166 RKPQKAREIFKMIKRN---NLKPNIVSYN 191
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + + M K + P+ T +I I YC ++ AF V +R+ P+VFT+
Sbjct: 263 HVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYN 322
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+I C++ ++ A QLL DE++ LKPD Y+
Sbjct: 323 CIIKRLCKIKKVEEAYQLL-----DEMISSGLKPDTWSYN 357
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ KG+ PN T ++++ Y GQI A I+ G++P++ F LINGF
Sbjct: 275 EMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRM 334
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++LR ++ Q++PDVV YS
Sbjct: 335 DRDGVDEVLRLMKE---FQIQPDVVTYS 359
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G++P+ VT N + Y + A ++ ++++G +P+ TF ++NG+ + G
Sbjct: 240 KMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEG 299
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
QI+ ALQ + R +D + KP++++++
Sbjct: 300 QIKEALQFVYRIKD---LGFKPNLLVFN 324
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ I+P+ + ++D C G I+ A+ VF + + G PDV ++ +INGFC+
Sbjct: 384 EMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKAS 443
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A +L E+ ++ L PD V ++
Sbjct: 444 RVMGAWRLY---EEMQVKGLDPDEVTFN 468
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K++ + SL M GI+P+ NI ++ C ++ A +F T+ +G +PDV +
Sbjct: 93 VKNFLLIESLLRDMDDLGIVPDIWAFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVS 152
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPD 95
+ +I+ C++ + + + R+ D LKPD
Sbjct: 153 YTIIIDALCKVKRFDEVVHVWRKLIDS---GLKPD 184
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+ ++MQ KG+ + V+ N +I +C + + A+ ++ + ++G QPDV TF LI F
Sbjct: 312 MVNKMQSKGVC-DAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFL 370
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G A +LL + +V PDV+ Y+
Sbjct: 371 RKGGSNVANKLLVEMKAMRIV---PDVIFYT 398
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +M K I + T N LI + + ++N A +F + PDV+TF
Sbjct: 13 KLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAENINPDVYTF 72
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++GFC+ G+++ A +L D+ +KP VV YS
Sbjct: 73 NILVDGFCKDGRVKEAKNVLAMMIKDD---IKPRVVTYS 108
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I P VT + L+D YC + ++N A +F ++ RG +V ++ T+INGFC++ + A+
Sbjct: 100 IKPRVVTYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAI 159
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
L ++++ +V+IYS
Sbjct: 160 NLFEEMRCRKIIR---NVLIYS 178
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ I L ++M + I P+ T NIL+D +C G++ A +V A + K +P V T+++L
Sbjct: 51 NDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSL 110
Query: 65 INGFCQMGQIRPALQL 80
++G+C + ++ A ++
Sbjct: 111 MDGYCLINEVNKAKEI 126
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M +G+M N + +I+ +C + ++ A ++F +R R +V ++ LI+G C+ G
Sbjct: 129 SMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDGLCKSG 188
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I AL+L+ D P++VIYS
Sbjct: 189 RISYALKLVDEMHDR---GQPPNIVIYS 213
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK I + ++ G P+ N +I +C +++ A V ++KRG++PDV T
Sbjct: 125 MKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVT 183
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LI FC G++ AL+++ + D KP V+ Y+
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKD---NCKPTVITYT 220
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M +KG PN +T + LI C G+I+ A +V ++++ PD +++ LI+ C
Sbjct: 308 LMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC 367
Query: 70 QMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
+ G++ A++ L D+++ PD++ Y+
Sbjct: 368 REGKVDLAIEFL-----DDMISGGHLPDILSYN 395
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
HY V SL M G+ P T N+LI C ++ A +F + ++G QP+ FT
Sbjct: 133 HY--VTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVG 190
Query: 63 TLINGFCQMGQIRPALQLL 81
L+ GFC+ G+ + AL+ +
Sbjct: 191 ILVRGFCRAGRTKQALEFV 209
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY----QPDVFTFATLI 65
L +M KG++P+ VT N I C G++ A +F ++ G +P+V TF ++
Sbjct: 241 LVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLML 300
Query: 66 NGFCQMGQIRPALQLL 81
GFCQ G + A L+
Sbjct: 301 KGFCQEGMMEEARSLV 316
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG PN VT LI Y Q+ A +F + G +P+V T+ LI+G C+ G
Sbjct: 520 EMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAG 579
Query: 73 QIRPALQLLRRAEDD 87
QI A Q+ R D
Sbjct: 580 QIEKACQIYARMRGD 594
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG +P+ T + +I C ++ AFS+F +++ G P V+T+ LI+ FC+ G
Sbjct: 450 EMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAG 509
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
I+ A + DE++ P+VV Y+
Sbjct: 510 LIQQARKWF-----DEMLHKGCTPNVVTYT 534
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M+ GI+P+ T ILID +C G I A F + +G P+V T+ LI+ +
Sbjct: 481 SLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAY 540
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ Q+ A +L E L KP+VV Y+
Sbjct: 541 LKAKQMPVADELF---EMMLLEGCKPNVVTYT 569
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G PN + + +ID +C +G++ A VF + +RGY P+++T+++ I+ + +
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++L + ++ P+VVIY+
Sbjct: 702 LDLVLKVLSKMLENSCT---PNVVIYT 725
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V+ + +M PN V ++D C +G+ + A+ + + ++G P+V T+ +I+
Sbjct: 705 VLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 764
Query: 67 GFCQMGQIRPALQLLR 82
GF + G+I L+L R
Sbjct: 765 GFGKSGKIEQCLELFR 780
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL M KG P+ VT +ID +C +G+I+ A + + K G +P+ T+ L+NG
Sbjct: 429 SLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGL 488
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +++ +E+ P+ + YS
Sbjct: 489 CHNGKSLEAREMINVSEEH---WWTPNAITYS 517
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L+ +M KG +PN V N+LI C + A +G +V F ++
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I GFCQ+G + AL +L ED L PD + Y+
Sbjct: 590 IYGFCQIGDLDAALSML---EDMYLSNKHPDAITYT 622
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + + + KG + V + ++D +C I+ A S+ + +G PDV T+
Sbjct: 388 HADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYT 447
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I+GFC++G+I A ++L++ KP+ V Y+
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKH---GCKPNTVTYT 482
>Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:6327520-6326399 | 20130731
Length = 373
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 6 TVISLSHQMQ--------LKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPD 57
TV+SL+ Q++ K ++P+ T +ILI C+C G ++ A +F I K G+ P
Sbjct: 80 TVVSLAQQLEEVKYRNNIYKRVLPDIHTWSILITCHCFHGNMSSAICLFNNIIKTGHPPS 139
Query: 58 VFTFATLINGFCQMGQIRPAL 78
T + +GFC++G+I A+
Sbjct: 140 SETLYDIFDGFCRIGKIHKAI 160
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L QM+ G P+ T +L+ +C +G+ A F + + G +P+V+T+ LI+
Sbjct: 279 ALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLID 338
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQ 91
FC++G++ +++L + LV
Sbjct: 339 YFCKVGKMDEGMEMLSTMLEKGLVS 363
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI PN T +LID +C +G+++ + +T+ ++G V F LI+G+C+ G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379
Query: 73 QIRPALQLL 81
+ A+ +L
Sbjct: 380 MMEDAICVL 388
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G + N V+ LI +C +G+I+ A +F +++ G PDV T+ L+ FC++G+
Sbjct: 251 MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIYS 100
AL+ +E+V+ ++P+V Y+
Sbjct: 311 ETEALKFF-----EEMVENGIEPNVYTYT 334
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H M G +P+ T IDC C +G++ A VF +++++ + + F + LI+G+C
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516
Query: 70 QMGQIRPALQLLRR 83
+ + A L +R
Sbjct: 517 KAEKFSDAHLLFKR 530
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN ++ N +++ +C +G + A + F + K G+ D FT+ +LI G+C++ ++ A
Sbjct: 185 GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDA 244
Query: 78 LQLLR 82
++
Sbjct: 245 YKVFE 249
>Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5347631-5344253 | 20130731
Length = 791
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ T N ++ C +G+IN A V+ ++ GY+PD FT+ L+ G C+ ++ AL++
Sbjct: 273 PDMCTYNSVLSVLCKVGKINDALIVWDELKGCGYEPDEFTYTILVRGCCRTYRMDVALRI 332
Query: 81 LRRAEDDELVQLKPDVVIYS 100
+D+ +P V++Y+
Sbjct: 333 FNEMKDN---GFRPGVLVYN 349
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 52.8 bits (125), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
++ G+ P+ T NILI +C ++ F F + PDV T+ TL++G C+ G+
Sbjct: 217 LKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ A L+ + L PDVV Y+
Sbjct: 277 IKVAHNLV-NGMSKKCKDLSPDVVTYT 302
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKR--GYQPDVFTFATLINGFCQMGQIRPAL 78
P+ VT N L+D C G+I A ++ + K+ PDV T+ TLI G+C+ ++ AL
Sbjct: 259 PDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEAL 318
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
+L E+ LKP++V Y+
Sbjct: 319 DIL---EEMNGRGLKPNIVTYN 337
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+SL +MQ++G PN V N+LI C G ++ A + + +G P+ T+ +L++
Sbjct: 229 AVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVH 288
Query: 67 GFCQMGQIRPALQLLRR 83
G C G++ A+ LL R
Sbjct: 289 GLCLKGKLDKAMSLLNR 305
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I PN ++ N++I C +G ++ A VF + R D +T++TL++G C G+I A+
Sbjct: 171 IQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAV 230
Query: 79 QLL 81
LL
Sbjct: 231 SLL 233
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T + M+ +GI P+ VT N LI + +++ A S+F ++ + P+V ++ T++
Sbjct: 257 TAVRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTML 316
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GF +G++ A ++ +D +KP+ V ++
Sbjct: 317 KGFVDVGKVDRAFEVFEEMKD---CGIKPNAVTFT 348
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M+ K +MPN ++ ++ + +G+++ AF VF ++ G +P+ TF TL+ G
Sbjct: 295 SLFVEMKGKNLMPNVISYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGL 354
Query: 69 CQMGQIRPALQLL 81
C ++ A +L
Sbjct: 355 CDADKMVEAGNVL 367
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M LKG++ N T NILI +C LG++ A V + + + G PD T++T+I C
Sbjct: 765 LHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHC 823
Query: 70 QMGQIRPALQL----LRRAEDDELVQLKPDVVIYS 100
+ G + A++L LR+ ++PD V ++
Sbjct: 824 RSGDVGAAVELWDTMLRKG-------VEPDSVAFN 851
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I P VT N++I+ YC ++ AF + + G PD +T+ LI+G C
Sbjct: 520 LFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLC 579
Query: 70 QMGQIRPA 77
G++ A
Sbjct: 580 STGRVSAA 587
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G+ P T LI YC Q+ AF ++ + ++ P V+TF LI G C
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509
Query: 70 QMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A +L DE+V+ +KP V Y+
Sbjct: 510 STNEMAEASKLF-----DEMVERKIKPTEVTYN 537
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM+ KG +PN T NILI +C ++ A +F ++ G + TF T+I G C G
Sbjct: 338 QMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397
Query: 73 QIRPALQLLRRAED 86
+I +L E+
Sbjct: 398 RIEDGFSILELMEE 411
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 44/71 (61%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M +G + +T N L+D C Q++ A ++F I+ +G QP ++T+ L++G C
Sbjct: 261 LVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLC 320
Query: 70 QMGQIRPALQL 80
+ G+++ A ++
Sbjct: 321 KNGRLKDAQEV 331
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L +M LK + P+ VT N LID G+I+ A+ + + RG DV T+
Sbjct: 218 KMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 277
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ C+ Q+ A+ L + +D ++P + Y+
Sbjct: 278 NSLLDALCKNHQVDMAITLFTKIKDQ---GIQPYIYTYT 313
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M I PN VT N LI +C +GQ+ A + + + P+V TF TL++G C
Sbjct: 86 LYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLC 145
Query: 70 QMGQIRPALQLL 81
+ G+++ A ++L
Sbjct: 146 KEGEMKKARKVL 157
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I+L +++ +GI P T IL+D C G++ A V+ + +GY DV + +ING
Sbjct: 294 ITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMING 353
Query: 68 FCQMGQIRPALQLLRRAEDD 87
C+ AL LL + +D+
Sbjct: 354 LCKESLFDKALSLLSKMKDN 373
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G+ N VT + L+D Y + ++N A VF T+ +RG +V ++ +ING C+
Sbjct: 160 MIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKM 219
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + L + PD+V Y+
Sbjct: 220 VDEAVNLFKEM---HLKNMAPDIVTYN 243
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++L ++ LK + P+ V + LID C G+I+ + + + RG Q D+ +
Sbjct: 9 KMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIY 68
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L++ + Q+ A+ LL++ +D ++PD+ Y+
Sbjct: 69 TSLLDALFKNHQVDKAIALLKKIKD---RGIEPDMFTYT 104
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
I+L +++ +GI P+ T +L+D C G++ A V+ + +GY + +
Sbjct: 82 DKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVM 141
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING C+ G AL +L ED+ PDVV Y
Sbjct: 142 INGLCKEGLFDEALFVLSEMEDNGCT---PDVVTYK 174
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V L M +G + + L+D Q++ A ++ I+ RG +PD+FT+ L
Sbjct: 47 SDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTML 106
Query: 65 INGFCQMGQIRPALQLLR 82
++G C+ G+++ A ++ R
Sbjct: 107 VDGLCKNGRLKDAQEVYR 124
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI+P+ + L++ C G + +A + + G+ + T+ TL+ G C G++ +
Sbjct: 133 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 192
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+Q+L R LV P+VV YS
Sbjct: 193 MQILDRLIKKGLV---PNVVTYS 212
>Medtr5g096480.1 | PPR containing plant-like protein | HC |
chr5:42186367-42185891 | 20130731
Length = 158
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQI-NFAFSVFATIRKRGYQPDVFTFA 62
+S V ++ + M+ G++P+ N LI C C G + A +VF I+ G+ PD T+
Sbjct: 27 WSRVTAIFYSMKTNGVVPDLYIYNTLITC-CRQGSLYEEAVNVFDRIKSAGFVPDRVTYN 85
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
L++ F ++ + + ALQ+L+ E + P+V+ Y
Sbjct: 86 ALLDVFAKVRRPKEALQVLKDMESN---GFSPNVITY 119
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M +GI P+ VT N LIDC+C G+ + A +F +++ GY P V T+ +IN
Sbjct: 445 ERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQ 504
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LL + + L+ P+ V Y+
Sbjct: 505 ERWERVNDLLSKMQSQGLL---PNAVTYT 530
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ + V L +MQ +G++PN VT L+D Y G+ N A ++ G++P +
Sbjct: 505 ERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMY 564
Query: 62 ATLINGFCQMGQIRPALQLLR 82
LIN + Q G A+ R
Sbjct: 565 NALINAYAQRGLSDQAVNAFR 585
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M +GI P+ VT N LIDC+C G+ + A +F +++ GY P V T+ +IN
Sbjct: 445 ERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQ 504
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LL + + L+ P+ V Y+
Sbjct: 505 ERWERVNDLLSKMQSQGLL---PNAVTYT 530
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ + V L +MQ +G++PN VT L+D Y G+ N A ++ G++P +
Sbjct: 505 ERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMY 564
Query: 62 ATLINGFCQMGQIRPALQLLR 82
LIN + Q G A+ R
Sbjct: 565 NALINAYAQRGLSDQAVNAFR 585
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+++G PN T N +I Y LG AF ++K G+ PDV + LI+GF
Sbjct: 204 LFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFA 263
Query: 70 QMGQIRPALQLLR 82
Q Q R + R
Sbjct: 264 QNHQFRETFTVFR 276
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + + +M +G+ P VT N L+ Y GQ+N A+ F ++KR + DV T
Sbjct: 217 IKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVT 276
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ T+++GF G+++ + ++ + LV P V Y+
Sbjct: 277 YTTMVHGFGVAGEVKRSKRVFDAMVKEGLV---PSVATYN 313
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G++P+ T N LI C + A VF + +G P++ T+ +I G C G+
Sbjct: 300 MVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGE 359
Query: 74 IRPALQLLRRAEDD 87
I ++ ++R E++
Sbjct: 360 IERGVEFMKRMEEN 373
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG +PN T N++I CH G+I + + G P V T+ +I +C G
Sbjct: 334 EMVGKGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEG 393
Query: 73 QIRPALQLLRR 83
++ L+L +
Sbjct: 394 ELEKGLELFEK 404
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M GI+P+ + L++ C G + +A + + G+ + T+ TL+ G C G+
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGK 63
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++Q+L R LV P+VV YS
Sbjct: 64 LNQSMQILDRLIKKGLV---PNVVTYS 87
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL H+M KGI + ++ N LI C G++ A ++ + +G +P V +F LI
Sbjct: 396 LSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKC 455
Query: 68 FCQMGQIRPALQLLRRAEDDEL 89
C++G A++LL+ D L
Sbjct: 456 LCKVGDTEGAMRLLKDMHDRHL 477
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++++ SL +++ G+ P+ + N +I+ + G+++ A +F +++ G +P T
Sbjct: 91 LKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTST 150
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F TLI GF +G+ A++LL D +KP+ Y+
Sbjct: 151 FNTLIKGFGIVGRPHEAMKLLEMMIQDG--NVKPNERTYN 188
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++++ SL +++ G+ P+ + N +I+ + G+++ A +F +++ G +P T
Sbjct: 91 LKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTST 150
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F TLI GF +G+ A++LL D +KP+ Y+
Sbjct: 151 FNTLIKGFGIVGRPHEAMKLLEMMIQDG--NVKPNERTYN 188
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ + + +L QM G PN VT N LI Y + A +VF ++++ +PD T+
Sbjct: 421 REFGAINNLLEQMVKDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKRCEPDRVTY 480
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+ + G + A+ + R + V L PD YS
Sbjct: 481 CTLIDIHAKAGYLDVAMSMYERMQQ---VGLSPDTFTYS 516
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+++ +QMQ K P+ VT LID + G ++ A S++ +++ G PD FT++ +IN
Sbjct: 462 LNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTYSVMINC 521
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A +L D V P++V Y+
Sbjct: 522 LGKSGNLAAADRLFGEMVDQGCV---PNIVTYN 551
>Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC |
chr1:15086400-15099057 | 20130731
Length = 1347
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
N T N LID Y GQI + +FA + K+G P TF T+I+ + G+IR LL
Sbjct: 850 NSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLL 909
Query: 82 RRAEDDELVQLKPDVVIYS 100
+R E+ ++ PD Y+
Sbjct: 910 QRMEE---LRCPPDTRTYN 925
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M+ K + P+ VT N+LI ++G ++ A + + +RG +PD+ T I G+
Sbjct: 469 SLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGY 528
Query: 69 CQMGQIRPALQLLRR 83
C +G I A + R
Sbjct: 529 CIIGNIEEAEERYAR 543
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G++PN T N LI G I+ A S+ +R + +PDV T+ LI G +G
Sbjct: 438 QMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIG 497
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVV 97
+ A QL DE+VQ +PD++
Sbjct: 498 DLDLAHQLC-----DEMVQRGREPDLI 519
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG++P+ T NILI C G+I+ A +F + K PD ++ +I+G C G
Sbjct: 333 EMLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNG 392
Query: 73 QIRPALQLL 81
+ A LL
Sbjct: 393 DVLRAKDLL 401
>Medtr5g042370.1 | PPR containing plant-like protein | HC |
chr5:18623271-18619747 | 20130731
Length = 767
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
N T N LID Y GQI + +FA + K+G P TF T+I+ + G+IR LL
Sbjct: 270 NSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLL 329
Query: 82 RRAEDDELVQLKPDVVIYS 100
+R E+ ++ PD Y+
Sbjct: 330 QRMEE---LRCPPDTRTYN 345
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L ++M +G+ PN ++ + +I C +G + + +VF + RG +P+V TF +
Sbjct: 260 FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTS 319
Query: 64 LINGFCQMGQIRPALQL 80
LI GF G++ A+ L
Sbjct: 320 LIKGFFVRGRVGDAVGL 336
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ + +L + M+ +G+ PN T N+L+ C G+++ A + + +G PD ++ T
Sbjct: 160 FKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTT 219
Query: 64 LINGFCQMGQIRPALQLLRRAE 85
+I+ C++G + A +L + E
Sbjct: 220 VISSMCKLGDVDKARELAMKFE 241
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L + M +G+ PN V N LI C G ++ A SV+ + K +P+V T++T+I G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F + G + A + + + +P+VV+Y+
Sbjct: 394 FAKSGDLVSACETWNKMIN---CGCRPNVVVYT 423
>Medtr5g077220.1 | PPR containing plant-like protein | HC |
chr5:32962861-32959451 | 20130731
Length = 981
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L+ +MQ G P+ T + +I CY LGQ++ A V+ + G +P+ + LINGF
Sbjct: 557 LTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFA 616
Query: 70 QMGQIRPALQLLRRAEDDEL 89
+ G++ ALQ ++ L
Sbjct: 617 EHGRLDEALQYFHLMQESGL 636
>Medtr1g033840.1 | PPR containing plant-like protein | HC |
chr1:12239375-12241751 | 20130731
Length = 605
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ +S+ + + ++ LKG P VT +I+ YC LGQ A +F + ++G+ V +
Sbjct: 380 RGFSSTVKIFEKLILKGYEPGQVTYASMINVYCRLGQNIKAEKIFDEMMQKGFDKCVVAY 439
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++I + + G++R A++L+ + ++ KP+V IY+
Sbjct: 440 SSMIVMYGRTGRLRNAMKLVAKMKEK---GCKPNVWIYN 475
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M+ K + P+ VT N+LI ++G ++ A + + +RG +PD+ T I G+
Sbjct: 450 SLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRGREPDLITCTEFIRGY 509
Query: 69 CQMGQIRPALQLLRR 83
C +G I A + R
Sbjct: 510 CIIGNIEEAEERYAR 524
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G++PN T N LI G I+ A S+ +R + +PDV T+ LI G +G
Sbjct: 419 QMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIG 478
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVV 97
+ A QL DE+VQ +PD++
Sbjct: 479 DLDLAHQLC-----DEMVQRGREPDLI 500
>Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:23816810-23816418 | 20130731
Length = 130
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M + I P+ V+ ILID Y H+G++ A ++F + +G P++ + +L+NG + Q
Sbjct: 1 MSFENIKPDVVSYGILIDSYSHIGEMCGACNLFNEMEHKGLDPNLMIYNSLLNGLFKSNQ 60
Query: 74 IRPALQLLRR 83
AL+L +
Sbjct: 61 PNEALKLFDK 70
>Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-28239601
| 20130731
Length = 400
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFA-TIRKRGYQPDVFTFAT 63
S+ ISL H++ G P T L+ +C QI+ A + I K+G+Q D +
Sbjct: 140 SSAISLFHKIIDTGHHPTAGTLYSLLYGFCDRHQIHKAMHFYNYIILKKGFQLDHKCYLV 199
Query: 64 LINGFCQMGQIRPALQLLRRA----EDDELVQLKPDV 96
LI G C++G+ A+QLLRRA E+D LV D+
Sbjct: 200 LIKGLCKIGETHTAIQLLRRALQTDEEDRLVNQAYDL 236
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M G+ P+F T NI++ G++ A + +R+RG +P V F TLI+G
Sbjct: 309 LFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLS 368
Query: 70 QMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
+ G + + DE+V++ PDVV Y+
Sbjct: 369 RSGHLDDCEHIF-----DEMVRIGIIPDVVAYT 396
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI+P+ V ++I Y + A +F + RG P+VFT+ ++I GFC G
Sbjct: 382 EMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAG 441
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +L+ E P+ V+YS
Sbjct: 442 KFDEACSMLKEMETK---GCSPNFVVYS 466
>Medtr7g017610.1 | PPR containing plant-like protein | HC |
chr7:5623801-5620341 | 20130731
Length = 613
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ +S+ +M PN V N+LI+ G++ AF V+ T++ G +PD +T+
Sbjct: 376 WDEALSVFQKMLTSDFKPNLVACNVLINSLGKEGELKLAFQVYNTMKSFGQKPDAYTYNA 435
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQL 92
L++ + + AL++ R E ++ +
Sbjct: 436 LMSSLNKANKHNEALKIFNRIERSQICEF 464
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V+ L +++ + + V NI++D C LG+++ A S + D+ + TL
Sbjct: 232 SEVVDLFKEIKQSCLFLDGVAYNIVLDSLCKLGKVDDAVSTLEELTSMNIDLDIKHYTTL 291
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING+C G+ A L + E+ KPDVV Y+
Sbjct: 292 INGYCLQGKTVEAQCLFKEMEEK---GFKPDVVAYN 324
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M G+ P+F T NI++ G++ A + +R+RG +P V F TLI+G
Sbjct: 333 LFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLS 392
Query: 70 QMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
+ G + + DE+V++ PDVV Y+
Sbjct: 393 RSGHLDDCEHIF-----DEMVRIGIIPDVVAYT 420
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI+P+ V ++I Y + A +F + RG P+VFT+ ++I GFC G
Sbjct: 406 EMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAG 465
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +L+ E P+ V+YS
Sbjct: 466 KFDEACSMLKEMETK---GCSPNFVVYS 490
>Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29889526-29890146 | 20130731
Length = 188
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHL-----------------GQINFAFSVFA 47
S V+ L QM +G+ PN VT N ++D C G++ A ++F
Sbjct: 61 SYVLQLVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARNIFE 120
Query: 48 TIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDD 87
+ +GY V T+ +I GFC G +L LL + E++
Sbjct: 121 DLLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEEN 160
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K ++L +M K I+PN VT N LID G I++ + + RG P++ T
Sbjct: 22 IKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGIISYVLQLVDQMHDRGVPPNIVT 81
Query: 61 FATLINGFCQMGQIRPALQLLRRAED 86
+ ++++ C+ Q+ + L + +D
Sbjct: 82 YNSILDALCKTHQVDKTIALSTKFKD 107
>Medtr2g078690.1 | PPR containing plant-like protein | HC |
chr2:32882427-32884704 | 20130731
Length = 331
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 2 KHYSTVISLSHQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
KH +L H+ K G + T N++++ +C LG + A ++ I +PD+FT
Sbjct: 74 KHIEEAETLFHRNLNKFGFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIAYKCKPDIFT 133
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVI 98
+AT I + G++ AL+L R +E KPDVVI
Sbjct: 134 YATFIKAMTKKGKLGTALKLFNRMWKEE--SCKPDVVI 169
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH I + +M G PN VT + LI Y ++G+ N A++VF ++ +G PD T+
Sbjct: 918 KHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFKGPFPDFKTY 977
Query: 62 ATLINGFCQMGQIRPALQLL 81
+ ++ C+ G+ A++L+
Sbjct: 978 SMFLSCLCKAGRSEEAMRLI 997
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
++P+ T +I+I C+C ++ A V T+ + G++PD T LIN C+ G+++ A+
Sbjct: 142 LVPDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAM 201
Query: 79 QLLRRAE 85
++ E
Sbjct: 202 EVFEFLE 208
>Medtr6g017035.1 | PPR containing plant-like protein | HC |
chr6:6694817-6692735 | 20130731
Length = 448
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y V+ L +M+ G+ PN T N+LI C +G A V T+ FTF T
Sbjct: 257 YERVVDLVEKMKKIGVEPNGSTYNLLISCLFKIGNFAEACQVLETMENENGLSKEFTFDT 316
Query: 64 LINGFCQMGQIRPALQLLRR 83
+I C+ GQI AL+ + +
Sbjct: 317 IIRLLCKHGQIDLALKFIDK 336
>Medtr2g072170.1 | PPR containing plant-like protein | HC |
chr2:30300092-30302292 | 20130731
Length = 540
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y V L G+ + NI+I C G++ AF VF K G + + TF
Sbjct: 167 KLYDVVFDLYASALKLGVEIDACCLNIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTF 226
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDD 87
AT++NG C+ G + LL R +++
Sbjct: 227 ATIMNGLCEKGMVDEGFGLLERMKEE 252
>Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:40679471-40676723 | 20130731
Length = 715
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 22/113 (19%)
Query: 4 YSTVISLSHQMQL-------------KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIR 50
YST+IS + + L G+MP+ VT + ++D Y LG++ ++F R
Sbjct: 228 YSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERGR 287
Query: 51 KRGYQPDVFTFATLINGFCQMGQ---IRPALQLLRRAEDDELVQLKPDVVIYS 100
G++PD TF+ L F + G IR LQ ++ + ++P++V+Y+
Sbjct: 288 ATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKS------LGVQPNLVVYN 334
>Medtr4g094688.1 | PPR containing plant protein | HC |
chr4:38731040-38725816 | 20130731
Length = 1086
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T + L +M+L G PNF ++I+ + G+++ A S F+ + K G+ P T+A L+
Sbjct: 375 TALRLWDEMKLAGFRPNFGLYTLIIESHAKSGKLDIAMSAFSDMEKAGFLPTPSTYACLL 434
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GQI A++L + L+P + Y+
Sbjct: 435 EMHAASGQIDHAMKLYNSMTN---AGLRPGLSTYT 466
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQI-NFAFSVFATIRKRGYQPDVFTFA 62
+S V ++ M+ G++P+ T N LI C C G + +VF I+ G+ PD T+
Sbjct: 293 WSRVTAIFDSMKTNGVVPDLYTYNTLITC-CRRGSLYEEVVNVFDQIKSAGFVPDRVTYN 351
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ F + + + ALQ+L+ E + P ++ Y+
Sbjct: 352 ALLDVFAKARRPKEALQVLKDMESN---GFSPTIITYN 386
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G P+ T N L+ Y + + + + K+G +PD ++ T+I +C+ G+
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL++ +D LV P+VV Y+
Sbjct: 748 MKEALRMFSEMKDSALV---PNVVTYN 771
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQI-NFAFSVFATIRKRGYQPDVFTFA 62
+S V ++ M+ G++P+ T N LI C C G + +VF I+ G+ PD T+
Sbjct: 293 WSRVTAIFDSMKTNGVVPDLYTYNTLITC-CRRGSLYEEVVNVFDQIKSAGFVPDRVTYN 351
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ F + + + ALQ+L+ E + P ++ Y+
Sbjct: 352 ALLDVFAKARRPKEALQVLKDMESN---GFSPTIITYN 386
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G P+ T N L+ Y + + + + K+G +PD ++ T+I +C+ G+
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL++ +D LV P+VV Y+
Sbjct: 748 MKEALRMFSEMKDSALV---PNVVTYN 771
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQP-DVFTFATLINGFCQMG 72
M + PNF T N+LID C G++ A + +++ G+ P D+ + ++NGFC+ G
Sbjct: 49 MLKSNVEPNFYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTG 108
Query: 73 QIRPALQLL 81
+++ AL +
Sbjct: 109 RLKEALSFV 117
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M I P VT NIL++ C G ++ + S++ + PD+ T+ TL+N C+ G
Sbjct: 346 MNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGF 405
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I ++QLL P +V Y+
Sbjct: 406 IDESIQLLHSLSG---TNCSPGLVTYN 429
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M I P VT NIL++ C G ++ + S++ + PD+ T+ TL+N C+ G
Sbjct: 346 MNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGF 405
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I ++QLL P +V Y+
Sbjct: 406 IDESIQLLHSLSG---TNCSPGLVTYN 429
>Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29912053-29912418 | 20130731
Length = 103
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 25 TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRA 84
T IL+ C G++ A VF + +GY DV+ + +I GFC G AL LL +
Sbjct: 3 TYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKM 62
Query: 85 EDDELVQLKPDVVIYS 100
E++ + PD Y
Sbjct: 63 EENGCI---PDAKTYE 75
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ ++ L +M+ +GI P+ +T N L+ H G + A VF T+ + G PD+ T++
Sbjct: 225 WEGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSY 284
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ F ++ ++ +LLR E + PDV Y+
Sbjct: 285 LVHTFGKLNKLEKVSELLREMESGGSL---PDVSSYN 318
>Medtr5g019030.1 | PPR containing plant-like protein | HC |
chr5:7164964-7167767 | 20130731
Length = 659
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + +M L GI P+ T + L+ + LG I +F+ +R+ G++PD + + L
Sbjct: 506 SNTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVL 565
Query: 65 INGFCQMGQIRPALQL 80
I G+C+ + A +L
Sbjct: 566 IEGYCKSTRAALAWRL 581
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L M+ KG N VT +L++ C LG+ A + + RG +P + F+ L+N
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I A+ L R +LKPDVV Y+
Sbjct: 297 LGKRGKIDEAMVLFREMRKR---RLKPDVVTYN 326
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L M+ KG N VT +L++ C LG+ A + + RG +P + F+ L+N
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I A+ L R +LKPDVV Y+
Sbjct: 297 LGKRGKIDEAMVLFREMRKR---RLKPDVVTYN 326
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L M+ KG N VT +L++ C LG+ A + + RG +P + F+ L+N
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I A+ L R +LKPDVV Y+
Sbjct: 297 LGKRGKIDEAMVLFREMRKR---RLKPDVVTYN 326
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y L M KGI + T N+LID C + + + +RK P+ T+ T
Sbjct: 230 YKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNT 289
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LING + G+I A ++ E+ L L P+ V Y+
Sbjct: 290 LINGLVKEGKIGVATKVF---EEMSLCNLLPNSVTYN 323
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++PN V + LI YC +G + A + +A + + G+ D FT + L+ FC+ G++ A
Sbjct: 441 GLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEA 500
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + ++M + + + VT N L++ C ++ A +F + +RG PD +T TL
Sbjct: 263 SGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTL 322
Query: 65 INGFCQMGQIRPALQLLR----RAEDDELVQLKPDVV 97
I+G+C+ G + AL L R+E ++ +L D++
Sbjct: 323 IHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMI 359
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ V+ +M G+MP+ +T N L+ G A + + + R PDVFT+ T
Sbjct: 300 FDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNT 359
Query: 64 LINGFCQMGQIRPALQLLRRA-EDDELVQLKPDVVIYS 100
++ C+ GQI L RR E+ ++ P+VV YS
Sbjct: 360 YLDTLCKAGQI----DLARRVFEEMSSKRVWPNVVTYS 393
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 13 QMQLKGIMPN-FVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
QMQ++GI+PN F +IL C LG + + + K G+Q +V+ + LI+ + +
Sbjct: 476 QMQIEGIVPNQFTYPSILKTCTT-LGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKH 534
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ AL++ RR +++++V + Y+
Sbjct: 535 GKLDHALKIFRRLKENDVVSWTAMIAGYT 563
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 13 QMQLKGIMPNFV-TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M+ GI+P + T++IL C C ++ A +F +++ Y PD+ + ++NGFC+M
Sbjct: 179 EMKRVGIVPCVLSTTSILYGC-CQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKM 237
Query: 72 GQIRPALQLLRRAEDD 87
G++ AL + ++D
Sbjct: 238 GRLEEALSFVWMIKND 253
>Medtr3g086470.1 | proton gradient regulation protein, putative |
LC | chr3:39190426-39190070 | 20130731
Length = 118
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
++ ISL ++ + G+ P+ +T NI+I+ + + A + G +PDV+TFAT
Sbjct: 6 HNVAISLFKKLNVAGVRPDVITMNIIINSLVQVANLKMAKCILGKSVILGLEPDVWTFAT 65
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELV 90
L G+ +G A++L + D V
Sbjct: 66 LFRGYSVVG----AMELHHKLVDSGFV 88
>Medtr1g037260.1 | PPR containing plant protein | HC |
chr1:13702972-13699671 | 20130731
Length = 547
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 44/78 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L ++ K ++ + V ++++ LG ++FA ++ + +RG+ + F + + I
Sbjct: 288 VTLLKRLLQKNLIGDSVAYSLIVHVKVRLGNLDFALEMYNEMVRRGFSENSFVYTSFIRA 347
Query: 68 FCQMGQIRPALQLLRRAE 85
FC+ G+I A+ L+R E
Sbjct: 348 FCEKGRIEEAIGLMREME 365
>Medtr1g114300.1 | PPR containing plant-like protein | HC |
chr1:51588477-51583476 | 20130731
Length = 553
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G PN V+ L++ Y G+ N A ++F ++ G +P FT+ ++ F Q +
Sbjct: 166 MNKNGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNK 225
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++ + +DE L+PD +++
Sbjct: 226 FKEAEEVFDKLLNDEKSPLRPDQKMFN 252
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ +QM I P+ T NILI YC + FA +F +RK G P+V TF T
Sbjct: 194 FDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNT 253
Query: 64 LING 67
LI G
Sbjct: 254 LIKG 257
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 13 QMQLKGIMPNFV-TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M+ GI+P + T++IL C C ++ A +F +++ Y PD+ + ++NGFC+M
Sbjct: 179 EMKRVGIVPCVLSTTSILYGC-CQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKM 237
Query: 72 GQIRPALQLLRRAEDD 87
G++ AL + ++D
Sbjct: 238 GRLEEALSFVWMIKND 253
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 13 QMQLKGIMPNFV-TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M+ GI+P + T++IL C C ++ A +F +++ Y PD+ + ++NGFC+M
Sbjct: 179 EMKRVGIVPCVLSTTSILYGC-CQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKM 237
Query: 72 GQIRPALQLLRRAEDD 87
G++ AL + ++D
Sbjct: 238 GRLEEALSFVWMIKND 253
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
++ + L ++M+ G +P+ N LI ++ AFS+F T+ + G PD+ +
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI 552
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++NG + G + A+++ + + +KPD V Y+
Sbjct: 553 ILNGLARTGGPKRAMEMFAKMKSS---TIKPDAVSYN 586
>Medtr1g090120.1 | PPR containing plant-like protein | HC |
chr1:40360702-40363825 | 20130731
Length = 827
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ+ G++ N + +I C+ LGQ+ A V+ + G +PD+ + LIN G
Sbjct: 553 RMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGAG 612
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++ A+ A + + L + VIY+
Sbjct: 613 RVKEAISY---ANEIKRAGLPGNTVIYN 637
>Medtr2g007030.1 | PPR containing plant-like protein | HC |
chr2:800464-794904 | 20130731
Length = 627
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
ST++ L + +Q++ N N ++ C G+ + +F ++ G PD+ T++TL
Sbjct: 120 STMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKFDTTMKLFRQMKHDGLVPDLVTYSTL 179
Query: 65 INGFCQMGQIRP-ALQLLRRAEDDELVQLKPDVVIY 99
I G ++ P AL+L++ +D+ +L+ D VIY
Sbjct: 180 IAGCVKVKDGYPKALELIQELQDN---KLRMDDVIY 212