Miyakogusa Predicted Gene

Lj2g3v1468300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1468300.1 tr|Q2R6R5|Q2R6R5_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os11g19130 PE=2 SV=1,33.78,3e-18,SPT2
chromatin protein,Chromatin SPT2; SPT2,Chromatin SPT2; SUBFAMILY NOT
NAMED,NULL; YEAST SPT2-REL,CUFF.37215.1
         (475 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g030610.1 | SPT2 chromatin protein | HC | chr5:12987786-12...   399   e-111
Medtr5g430710.1 | starch synthase | HC | chr5:13061955-13050336 ...   397   e-110

>Medtr5g030610.1 | SPT2 chromatin protein | HC |
           chr5:12987786-12982784 | 20130731
          Length = 457

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/414 (54%), Positives = 277/414 (66%), Gaps = 30/414 (7%)

Query: 44  PRQPTKEEIEYLGLRQKLKENHRKQLRKENSASLKDCSATKKKLPNDNFGSFFGPSQPVI 103
           PR+PTKEE++YL LRQKLKE+ RK+++K+NS SL D S  KK++  DN+GSFFGPSQPVI
Sbjct: 45  PRKPTKEELDYLELRQKLKESIRKKMQKQNSTSLADSSGRKKQIQRDNYGSFFGPSQPVI 104

Query: 104 APRVIQESKSLLENQHLQSRLXXXXXXXXXXXXXXXXXXXPSSHKQPPKVSETKIKAQTV 163
           A RVIQESKSLLEN+HL                        S+ KQPPKV+E  +KA+ +
Sbjct: 105 AQRVIQESKSLLENRHLVPMPSNTPQINKSTSKVSNGVLKSSAQKQPPKVNEKLVKAEKL 164

Query: 164 KDTRDYSFLMSDDAELPAPAKELPSRNTSVHNSEGRPAQVARMIKQPLINGGKPARGSGE 223
           K TRDYSFL+SDDA+LP P+KE PSRNTSV +S G+ AQV    K  L NGGK  RGSGE
Sbjct: 165 KVTRDYSFLLSDDADLPVPSKEPPSRNTSVRSSVGQAAQVPGKSKPSLSNGGKLVRGSGE 224

Query: 224 NRKPAVGAGHSVPKSGPSCKLSDTNKSGMASVDSRKQLGSNSGIGPGRPVVSKQLPSKMP 283
           NRKP  GA H  PK   + KLS T+++   SVDSRKQLG+NS  GPGRP++ K +PSKM 
Sbjct: 225 NRKPVAGARHLAPKPRSNYKLSSTSQASKVSVDSRKQLGNNSVNGPGRPLLPKGMPSKMH 284

Query: 284 ASTMGNKSSTLGMKRSVNGVQKPLPSKLNSSAPKQFVEQRRDVRVQNKPLPSKVHSSAPK 343
            +T  +KS T GM+  +NGVQKP PSK+ SS PKQ V+QRRDV                 
Sbjct: 285 VNTSVSKSVTPGMRNPINGVQKPAPSKVPSSVPKQGVDQRRDV----------------- 327

Query: 344 QIVDQRKDSRDQNKPKMVPKQPVASSRAQVNKPPLKQIPKRSDLPVHRPKNKVGKRHPXX 403
                    R+Q KP+ VPKQPV+SS+ QV+KPPLKQIPKRSDL   RPK+ V KR P  
Sbjct: 328 ---------REQYKPRTVPKQPVSSSKTQVSKPPLKQIPKRSDLHDQRPKSIVRKRRPDE 378

Query: 404 XXXXXXGMDYRNMIRSMFNYNPNKFVGDDDDDNMEAGFDEIMREEKRSALIAKK 457
                   D+R  IR+MF YNP  +  DDDD NMEAGFD+IM+EE++SA I ++
Sbjct: 379 PVVD----DWRREIRNMFGYNPKNYSDDDDDANMEAGFDDIMKEERKSAKIGRE 428


>Medtr5g430710.1 | starch synthase | HC | chr5:13061955-13050336 |
           20130731
          Length = 855

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/414 (54%), Positives = 277/414 (66%), Gaps = 30/414 (7%)

Query: 44  PRQPTKEEIEYLGLRQKLKENHRKQLRKENSASLKDCSATKKKLPNDNFGSFFGPSQPVI 103
           PR+PTKEE++YL LRQKLKE+ RK+++K+NS SL D S  KK++  DN+GSFFGPSQPVI
Sbjct: 45  PRKPTKEELDYLELRQKLKESIRKKMQKQNSTSLADSSGRKKQIQRDNYGSFFGPSQPVI 104

Query: 104 APRVIQESKSLLENQHLQSRLXXXXXXXXXXXXXXXXXXXPSSHKQPPKVSETKIKAQTV 163
           A RVIQESKSLLEN+HL                        S+ KQPPKV+E  +KA+ +
Sbjct: 105 AQRVIQESKSLLENRHLVPMPSNTPQINKSTSKVSNGVLKSSAQKQPPKVNEKLVKAEKL 164

Query: 164 KDTRDYSFLMSDDAELPAPAKELPSRNTSVHNSEGRPAQVARMIKQPLINGGKPARGSGE 223
           K TRDYSFL+SDDA+LP P+KE PSRNTSV +S G+ AQV    K  L NGGK  RGSGE
Sbjct: 165 KVTRDYSFLLSDDADLPVPSKEPPSRNTSVRSSVGQAAQVPGKSKPSLSNGGKLVRGSGE 224

Query: 224 NRKPAVGAGHSVPKSGPSCKLSDTNKSGMASVDSRKQLGSNSGIGPGRPVVSKQLPSKMP 283
           NRKP  GA H  PK   + KLS T+++   SVDSRKQLG+NS  GPGRP++ K +PSKM 
Sbjct: 225 NRKPVAGARHLAPKPRSNYKLSSTSQASKVSVDSRKQLGNNSVNGPGRPLLPKGMPSKMH 284

Query: 284 ASTMGNKSSTLGMKRSVNGVQKPLPSKLNSSAPKQFVEQRRDVRVQNKPLPSKVHSSAPK 343
            +T  +KS T GM+  +NGVQKP PSK+ SS PKQ V+QRRDV                 
Sbjct: 285 VNTSVSKSVTPGMRNPINGVQKPAPSKVPSSVPKQGVDQRRDV----------------- 327

Query: 344 QIVDQRKDSRDQNKPKMVPKQPVASSRAQVNKPPLKQIPKRSDLPVHRPKNKVGKRHPXX 403
                    R+Q KP+ VPKQPV+SS+ QV+KPPLKQIPKRSDL   RPK+ V KR P  
Sbjct: 328 ---------REQYKPRTVPKQPVSSSKTQVSKPPLKQIPKRSDLHDQRPKSIVRKRRPDE 378

Query: 404 XXXXXXGMDYRNMIRSMFNYNPNKFVGDDDDDNMEAGFDEIMREEKRSALIAKK 457
                   D+R  IR+MF YNP  +  DDDD NMEAGFD+IM+EE++SA I ++
Sbjct: 379 PVVD----DWRREIRNMFGYNPKNYSDDDDDANMEAGFDDIMKEERKSAKIGRE 428