Miyakogusa Predicted Gene

Lj2g3v1468090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1468090.1 Non Characterized Hit- tr|K3Y162|K3Y162_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,68.75,0.000005,seg,NULL; DNA BINDING,NULL; FAMILY NOT
NAMED,NULL,CUFF.37185.1
         (434 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076850.1 | hypothetical protein | HC | chr7:29013949-2901...   380   e-105
Medtr5g030750.1 | hypothetical protein | HC | chr5:13140972-1314...   362   e-100

>Medtr7g076850.1 | hypothetical protein | HC |
           chr7:29013949-29010633 | 20130731
          Length = 440

 Score =  380 bits (977), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 240/459 (52%), Positives = 279/459 (60%), Gaps = 44/459 (9%)

Query: 1   MPKRNSSVCNHPTTTPRRSPRL------NXXXXXXXXXXXXXXAESRICTVGLRRSPRFI 54
           MP RN +V  +P   PRRSPRL      N               +SR  TV +R+SP   
Sbjct: 1   MPNRNPTVV-YPPGAPRRSPRLVLLHENNNPTTPKPNSTNKSSTQSRSKTVRVRKSP--- 56

Query: 55  NNGVAEVPSLRRSPRFSDDQTLENEQRTPEKLSKPGNASGGSVKSARVKKGSVAKKKENS 114
            N   EVPS RRSPRFS+   +        K+S+ G+   G V     K+          
Sbjct: 57  -NLSHEVPSRRRSPRFSNKNDV--------KVSEFGSCDEGVVVEGGRKRRRKRGGHGIE 107

Query: 115 AVA----------------DEGIAVEDGGKGKGRNGVLAGKRKRGGGGEIHEGWTKEQEL 158
                              D    VED  K +   GV   KRKR GG E+ EGWTKEQEL
Sbjct: 108 EGGKKEEIEGGEEEGKRKHDGCEIVEDLRKEEVECGV-KRKRKRVGG-EVAEGWTKEQEL 165

Query: 159 ALQRAYYSAKPSPHFWKNVSKLVPGKSQQDCFDRIHHDYMTPPQSQPRSRAKTMNSSPLH 218
           AL+ AY++AKPSPHFWKNVSKLVPGKS+QDCFDR+HHD+ TPPQ QPRSRAK ++SSPLH
Sbjct: 166 ALRTAYFTAKPSPHFWKNVSKLVPGKSKQDCFDRVHHDFHTPPQCQPRSRAKAIDSSPLH 225

Query: 219 KFSISASKVLKPIDKTAKRSKSFKQKSFITQKSIEKLLQNRFKVDKDREGDIFSVLEPNI 278
           +FSISASK+L P  K A +S   K KS + QKSIE LLQ   KVD++ +GDIFSVLEPNI
Sbjct: 226 RFSISASKLLIPTGKKAGKSNILKPKSIVAQKSIENLLQRHLKVDQNHKGDIFSVLEPNI 285

Query: 279 EIPTNALQSSPTFSTPKQLKENQGLLNSCT--GTSSSSQKKTLSRFSNSR-VSDVVSPPV 335
           +  TNA+  S    TPKQ KENQG L  C    +SSS  KK+LSRFS S  V D+ SPPV
Sbjct: 286 DFSTNAILPSEELCTPKQQKENQGFLQICNERSSSSSIHKKSLSRFSGSSGVKDLASPPV 345

Query: 336 LKQVKNKVQHEKYINQLRCREARRMAASKRTKKTITGKMMGEGSSILKKDAVKEAKVALV 395
           LKQVKNKVQHEKY+NQLR R+ RR AAS  T K++     GEG  I K D VK AKVALV
Sbjct: 346 LKQVKNKVQHEKYVNQLRFRDLRRRAASTWTNKSVA----GEGKGIRKTDVVKAAKVALV 401

Query: 396 SEAKDAINKFQQSQVNFMGXXXXXXXXXXXXFGDEYESP 434
           SEA+DAINKFQQSQ+NFMG             G E ESP
Sbjct: 402 SEARDAINKFQQSQINFMGDTCSSDDDNDDDIGVEGESP 440


>Medtr5g030750.1 | hypothetical protein | HC |
           chr5:13140972-13143374 | 20130731
          Length = 431

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/446 (50%), Positives = 265/446 (59%), Gaps = 46/446 (10%)

Query: 11  HPTTTPRRSPRLNXXXXXX--XXXXXXXXAESRICTVGL-RRSPRFINNGVAEVPSLRRS 67
           +P  TPRRS RL                  +SR  TV L RRSPRF+     +V      
Sbjct: 10  YPPGTPRRSSRLLLLHENSNPTTPKPKSSTQSRSKTVRLLRRSPRFLKKNDVKVSEFG-- 67

Query: 68  PRFSDDQTLENEQRTPEKLSKPGNASGGSVKSARVKKGSVAKKKENSAVADEGIAVEDGG 127
              S D T    + +PE   K          S  + KG V +          G  +++GG
Sbjct: 68  ---SCDST---RKTSPEGKWKKC--------SGVIDKGVVGEGGRKRRRKRGGDGIDEGG 113

Query: 128 KGKGR------------------NGVLAGKRKRGGGGEIHEGWTKEQELALQRAYYSAKP 169
           K +                     G +  KRKR GG  + EGW+KEQELAL  AY++AKP
Sbjct: 114 KKEEIEGGVEGGEIVEELMKEEIEGGVKRKRKRVGG-VVAEGWSKEQELALSTAYFTAKP 172

Query: 170 SPHFWKNVSKLVPGKSQQDCFDRIHHDYMTPPQSQPRSRAKTMNSSPLHKFSISASKVLK 229
           SPHFWKNVSKLVPGKS+QDCFDR+HHD+ TPPQ QPRSRAK +NSSPLH+FSISASK+L 
Sbjct: 173 SPHFWKNVSKLVPGKSKQDCFDRVHHDFHTPPQCQPRSRAKAINSSPLHQFSISASKLLI 232

Query: 230 PIDKTAKRSKSFKQKSFITQKSIEKLLQNRFKVDKDREGDIFSVLEPNIEIPTNALQSSP 289
           P  K A +S   K KS +TQKSIE LLQ   KVD++ +GDIFSVLEPNI+  TNA+    
Sbjct: 233 PTGKKAGKSNILKPKSIVTQKSIENLLQRHLKVDQNHKGDIFSVLEPNIDFSTNAILPGQ 292

Query: 290 TFSTPKQLKENQGLLNSCTGTSSSSQKKTLSRFS-NSRVSDVVSPPVLKQVKNKVQHEKY 348
              TPKQ KENQG L S   +S    KK+LSRFS +S V D+ SPPVLKQVKNKVQHEKY
Sbjct: 293 ELCTPKQQKENQGFLQS---SSIHKHKKSLSRFSGSSDVKDLASPPVLKQVKNKVQHEKY 349

Query: 349 INQLRCREARRMAASKRTKKTITGKMMGEGSSILKKDAVKEAKVALVSEAKDAINKFQQS 408
           +NQLR R+ RR AAS R KK++     GEG  I K D VK AKVAL+SEA+DAI  FQQS
Sbjct: 350 VNQLRFRDLRRRAASTRAKKSVG----GEGKGIQKTDVVKAAKVALLSEARDAIKNFQQS 405

Query: 409 QVNFMGXXXXXXXXXXXXFGDEYESP 434
           Q+NFMG             G E ESP
Sbjct: 406 QINFMGNTCSSDEDNDDDIGVEDESP 431