Miyakogusa Predicted Gene

Lj2g3v1455180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1455180.1 tr|A9U6F5|A9U6F5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_103200,46.79,1e-17,seg,NULL;
coiled-coil,NULL,CUFF.37127.1
         (587 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g031750.1 | hypothetical protein | HC | chr5:13626233-1362...   538   e-153
Medtr5g031750.2 | hypothetical protein | HC | chr5:13626222-1362...   422   e-118

>Medtr5g031750.1 | hypothetical protein | HC |
           chr5:13626233-13622027 | 20130731
          Length = 543

 Score =  538 bits (1386), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 308/601 (51%), Positives = 368/601 (61%), Gaps = 72/601 (11%)

Query: 1   MALLGDDGRGYELARKLESCGVWRTWLGDSTYSNFAPFLSSPSAWDSFISTDPSNSRAHI 60
           M+LLG DGRGY+LAR LE+ GVWR WLGDS Y+NF PFLSSPS+WDSF+ TD S S  HI
Sbjct: 1   MSLLGTDGRGYDLARNLETHGVWRKWLGDSNYTNFVPFLSSPSSWDSFMKTDSSKSTLHI 60

Query: 61  HLQLRVRALLFDKXXXXXXXXXXXXXXXLLNPSFLRLHPDDLYFTLDQPPPKNQSKA--- 117
           HLQLRVRALLFDK               L NP+FL LHPDD+YFTLD     + S +   
Sbjct: 61  HLQLRVRALLFDKAASSISLSSNPNVSKL-NPNFLHLHPDDVYFTLDNNNAPSSSNSKVG 119

Query: 118 --YRNDDLPETWYTQVMESYKANKKLLAGDRE-SPKRSPVEMASYVKYTANQKKRRLAFR 174
             Y + +LPETWY QV+E+YKANKKL+  DRE SPKRSP EMASY+  ++N+KKRR+ F 
Sbjct: 120 SRYVDSELPETWYNQVIENYKANKKLVMWDRELSPKRSPAEMASYIMRSSNRKKRRVVFN 179

Query: 175 EGNHAADHASTMQPXXXXXXXXXXXXXXXXESVFPEVTFMWNCVPESALPMSNRVEINPQ 234
           E  H     S                    E VFPE+T+ WN VPESA+P+++RVE N  
Sbjct: 180 EEQHQVMDQSN---------GGNLVDGDDDEFVFPEITYAWNSVPESAIPVTDRVENNNN 230

Query: 235 KMKLYSSILDTLPPLMTRNPAMIERLGIRPEIISAEHGGPL---KFRPQWTGRVLSPEQG 291
           + +   S+LDTLP +MTRN           E ++ +HGG L   K   +    VL  EQ 
Sbjct: 231 QKERIVSVLDTLPLVMTRNA----------EYVNGKHGGGLYRGKLVSEGNEIVLGREQA 280

Query: 292 TKLSQKVVARILLGVGFEASMEGPVEYFAEVMSKRIVKIGTNLKVLTDSYKKQCSAIELL 351
            KLSQKVVAR+LLG GFEA+MEGP EY +EVMSKRIVKIGTNLKVL DSY +QCSAI+LL
Sbjct: 281 VKLSQKVVARVLLGAGFEAAMEGPTEYLSEVMSKRIVKIGTNLKVLADSYNQQCSAIDLL 340

Query: 352 KMLLKTVGFSNFAPLVDVVKDGSKNIXXXXXXXXXXXXXXXXXXXXXXXRLPREVQMR-- 409
           KMLLKTVGFSNFAPLVDVVKD S+NI                       RLP++VQM+  
Sbjct: 341 KMLLKTVGFSNFAPLVDVVKDDSRNIIQQGQQRPHGIQSQLQQQQQNSLRLPQQVQMQRQ 400

Query: 410 ---QMQQFLHSRNLAMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER 466
              QMQQ ++ +NLA                                           ER
Sbjct: 401 MHTQMQQMINPQNLAF----------------------------------QQQQQLHLER 426

Query: 467 LRTHPTSTPRAAMDIDKERPLVQVKIENQTDLPVDGNSFNTRHPXXXXXXXXXXXXSSFH 526
           LR+   STPR AMD++K+R LV+VK+EN +DLP D N+FN+ H             S+F 
Sbjct: 427 LRSQ-QSTPRPAMDVNKDRQLVKVKLENTSDLPSDSNAFNSIH-HQMQFRHQQAAMSNFL 484

Query: 527 PQSSNQFRQMANLQIPAMQSPNIGMVRAQPVKVEGFQELMGSPSSTKLDSEENRLTSPSS 586
           PQS+ QFRQM + QIP+    NI MVRA PVKVEGF EL G  SS+K DSEENRLTSPSS
Sbjct: 485 PQSNTQFRQMGSPQIPSQN--NISMVRAPPVKVEGFSELFGGDSSSKHDSEENRLTSPSS 542

Query: 587 K 587
           K
Sbjct: 543 K 543


>Medtr5g031750.2 | hypothetical protein | HC |
           chr5:13626222-13622069 | 20130731
          Length = 404

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/386 (57%), Positives = 263/386 (68%), Gaps = 29/386 (7%)

Query: 1   MALLGDDGRGYELARKLESCGVWRTWLGDSTYSNFAPFLSSPSAWDSFISTDPSNSRAHI 60
           M+LLG DGRGY+LAR LE+ GVWR WLGDS Y+NF PFLSSPS+WDSF+ TD S S  HI
Sbjct: 1   MSLLGTDGRGYDLARNLETHGVWRKWLGDSNYTNFVPFLSSPSSWDSFMKTDSSKSTLHI 60

Query: 61  HLQLRVRALLFDKXXXXXXXXXXXXXXXLLNPSFLRLHPDDLYFTLDQPPPKNQSKA--- 117
           HLQLRVRALLFDK               L NP+FL LHPDD+YFTLD     + S +   
Sbjct: 61  HLQLRVRALLFDKAASSISLSSNPNVSKL-NPNFLHLHPDDVYFTLDNNNAPSSSNSKVG 119

Query: 118 --YRNDDLPETWYTQVMESYKANKKLLAGDRE-SPKRSPVEMASYVKYTANQKKRRLAFR 174
             Y + +LPETWY QV+E+YKANKKL+  DRE SPKRSP EMASY+  ++N+KKRR+ F 
Sbjct: 120 SRYVDSELPETWYNQVIENYKANKKLVMWDRELSPKRSPAEMASYIMRSSNRKKRRVVFN 179

Query: 175 EGNHAADHASTMQPXXXXXXXXXXXXXXXXESVFPEVTFMWNCVPESALPMSNRVEINPQ 234
           E  H     S                    E VFPE+T+ WN VPESA+P+++RVE N  
Sbjct: 180 EEQHQVMDQSN---------GGNLVDGDDDEFVFPEITYAWNSVPESAIPVTDRVENNNN 230

Query: 235 KMKLYSSILDTLPPLMTRNPAMIERLGIRPEIISAEHGGPL---KFRPQWTGRVLSPEQG 291
           + +   S+LDTLP +MTRN           E ++ +HGG L   K   +    VL  EQ 
Sbjct: 231 QKERIVSVLDTLPLVMTRNA----------EYVNGKHGGGLYRGKLVSEGNEIVLGREQA 280

Query: 292 TKLSQKVVARILLGVGFEASMEGPVEYFAEVMSKRIVKIGTNLKVLTDSYKKQCSAIELL 351
            KLSQKVVAR+LLG GFEA+MEGP EY +EVMSKRIVKIGTNLKVL DSY +QCSAI+LL
Sbjct: 281 VKLSQKVVARVLLGAGFEAAMEGPTEYLSEVMSKRIVKIGTNLKVLADSYNQQCSAIDLL 340

Query: 352 KMLLKTVGFSNFAPLVDVVKDGSKNI 377
           KMLLKTVGFSNFAPLVDVVKD S+NI
Sbjct: 341 KMLLKTVGFSNFAPLVDVVKDDSRNI 366