Miyakogusa Predicted Gene

Lj2g3v1451840.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1451840.1 tr|B1GYH7|B1GYH7_NICSY Domains rearranged
methyltransferase (Fragment) OS=Nicotiana sylvestris
GN=dr,83.33,4e-17,SUBFAMILY NOT NAMED,NULL; DNA
(CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED,NULL; no description,NULL;
S,CUFF.37103.1
         (290 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   533   e-151
Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   520   e-148
Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   517   e-147
Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   509   e-144
Medtr4g123600.1 | DNA methyltransferase, putative | HC | chr4:50...   282   3e-76

>Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr6:838285-828430 | 20130731
          Length = 588

 Score =  533 bits (1372), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/292 (85%), Positives = 275/292 (94%), Gaps = 3/292 (1%)

Query: 1   MIGFGIPNEPN-FITQRRLPDDAIGPPYFYYENVAMALKGVWQTISRFLFDVEPEFVDSK 59
           M+GFGIPNEP+  IT RRLP++A+GPPYFYYENVA+A KGVWQTISRFL+DVEPE+VDSK
Sbjct: 242 MMGFGIPNEPSSMITHRRLPENAVGPPYFYYENVALAPKGVWQTISRFLYDVEPEYVDSK 301

Query: 60  YFCAAARKRGYIHNLPITNRFPLLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTVIGS 119
           YFCAAARKRGYIHNLPI NRFPLLP PPRTIHDAFPL R+WWP+WDPRTKLNCLQTV  S
Sbjct: 302 YFCAAARKRGYIHNLPIVNRFPLLPLPPRTIHDAFPLLRRWWPTWDPRTKLNCLQTVHAS 361

Query: 120 AKLTERIRKALENYDG--DPPESVQKYVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFP 177
           AKLT+RIRKA+E+ D   +P E+V+KYVLDQCRKWNLVWVG+NKVAPLEPDEVE LLGFP
Sbjct: 362 AKLTDRIRKAVESCDDFEEPSETVKKYVLDQCRKWNLVWVGKNKVAPLEPDEVEMLLGFP 421

Query: 178 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKDMYPKGINLLSLFSGIGGAEVALHR 237
           RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLK+MYPKG+NLLSLFSGIGGAEVALHR
Sbjct: 422 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPKGVNLLSLFSGIGGAEVALHR 481

Query: 238 LGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLEDVQQLDGDRLEQLM 289
           LGIPL+NVVSVEKSEVNRNIVRSWWEQTNQ+GNL+D +DVQQLD DRLE+LM
Sbjct: 482 LGIPLRNVVSVEKSEVNRNIVRSWWEQTNQRGNLVDFDDVQQLDADRLERLM 533


>Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7318299-7325230 | 20130731
          Length = 590

 Score =  520 bits (1338), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/293 (83%), Positives = 269/293 (91%), Gaps = 3/293 (1%)

Query: 1   MIGFGIPNEP-NFITQRRLPDDAIGPPYFYYENVAMALKGVWQTISRFLFDVEPEFVDSK 59
           M+GFG+PNEP + IT R LP++AIGPPYFYYENVA+  KGVWQTISRFL+DV+PE+VDSK
Sbjct: 244 MMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVALTPKGVWQTISRFLYDVQPEYVDSK 303

Query: 60  YFCAAARKRGYIHNLPITNRFPLLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTVIGS 119
           YFCAAARKRGY+HNLPI NRFPLLP PPRTI DAFPL RKWWPSWDPR  LNCLQTV GS
Sbjct: 304 YFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPLLRKWWPSWDPRKNLNCLQTVHGS 363

Query: 120 AKLTERIRKALENYDG--DPPESVQKYVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFP 177
           A+ T+RIRK LE+ +   +P ESV+KYVL+QCRKWNLVWVG+NKVAPLEPDEVE LLGFP
Sbjct: 364 AQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFP 423

Query: 178 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKDMYPKGINLLSLFSGIGGAEVALHR 237
           RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLK+MYP GINLLSLFSGIGGAEVALHR
Sbjct: 424 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHR 483

Query: 238 LGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLEDVQQLDGDRLEQLMS 290
           LG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID++DVQQLD +RLEQLMS
Sbjct: 484 LGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDIDDVQQLDAERLEQLMS 536


>Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7320468-7325119 | 20130731
          Length = 528

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/293 (83%), Positives = 269/293 (91%), Gaps = 3/293 (1%)

Query: 1   MIGFGIPNEP-NFITQRRLPDDAIGPPYFYYENVAMALKGVWQTISRFLFDVEPEFVDSK 59
           M+GFG+PNEP + IT R LP++AIGPPYFYYENVA+  KGVWQTISRFL+DV+PE+VDSK
Sbjct: 182 MMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVALTPKGVWQTISRFLYDVQPEYVDSK 241

Query: 60  YFCAAARKRGYIHNLPITNRFPLLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTVIGS 119
           YFCAAARKRGY+HNLPI NRFPLLP PPRTI DAFPL RKWWPSWDPR  LNCLQTV GS
Sbjct: 242 YFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPLLRKWWPSWDPRKNLNCLQTVHGS 301

Query: 120 AKLTERIRKALENYDG--DPPESVQKYVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFP 177
           A+ T+RIRK LE+ +   +P ESV+KYVL+QCRKWNLVWVG+NKVAPLEPDEVE LLGFP
Sbjct: 302 AQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFP 361

Query: 178 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKDMYPKGINLLSLFSGIGGAEVALHR 237
           RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLK+MYP GINLLSLFSGIGGAEVALHR
Sbjct: 362 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHR 421

Query: 238 LGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLEDVQQLDGDRLEQLMS 290
           LG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID++DVQQLD +RLEQLMS
Sbjct: 422 LGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDIDDVQQLDAERLEQLMS 474


>Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr3:2719044-2714206 | 20130731
          Length = 590

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 241/293 (82%), Positives = 266/293 (90%), Gaps = 3/293 (1%)

Query: 1   MIGFGIPNEP-NFITQRRLPDDAIGPPYFYYENVAMALKGVWQTISRFLFDVEPEFVDSK 59
           M+GFG+PNEP + IT R LP++AIGPPYFYYENVA+  KGVWQ ISRFL+DV+PE+VDSK
Sbjct: 244 MMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVAITPKGVWQKISRFLYDVQPEYVDSK 303

Query: 60  YFCAAARKRGYIHNLPITNRFPLLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTVIGS 119
           YFCAAARKRGY+HNLPI NRFPLLP PPRTI DAFP  R+WWPSWDPR  LNCLQTV GS
Sbjct: 304 YFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPPLRRWWPSWDPRKNLNCLQTVHGS 363

Query: 120 AKLTERIRKALENYDG--DPPESVQKYVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFP 177
           A+ T+RIRK LE+ +   +P ESV+KYVL+QCRKWNLVWVG+NKVAPLEPDEVE LLGFP
Sbjct: 364 AQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFP 423

Query: 178 RNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKDMYPKGINLLSLFSGIGGAEVALHR 237
           +NHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLK+MYP GINLLSLFSGIGGAEVALHR
Sbjct: 424 KNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHR 483

Query: 238 LGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLEDVQQLDGDRLEQLMS 290
           LG+PL NVVSVEKSEVNRNIVRSWW+QTNQKGNLIDL+DVQ LD +RLEQLMS
Sbjct: 484 LGVPLNNVVSVEKSEVNRNIVRSWWDQTNQKGNLIDLDDVQHLDAERLEQLMS 536


>Medtr4g123600.1 | DNA methyltransferase, putative | HC |
           chr4:50895545-50887895 | 20130731
          Length = 723

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 133/276 (48%), Positives = 180/276 (65%), Gaps = 1/276 (0%)

Query: 16  RRLPDDAIGPPYFYYENVAMALKGVWQTISRFLFDVEPEFVDSKYFCAAARKRGYIHNLP 75
           R L   A  PP+F + NV+      W+ +S+FL+ +EPEFV+++ F A  R  GYIHNLP
Sbjct: 396 RSLSSVAAKPPFFLFGNVSNITYDSWKKMSQFLYCIEPEFVNTELFSALNRIEGYIHNLP 455

Query: 76  ITNRFPLLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTVIGS-AKLTERIRKALENYD 134
             NRF +LP+PP TI DA P T+KWWP WD R KLNC     G   +L +R+ +AL N  
Sbjct: 456 TENRFQILPKPPMTIEDAIPRTKKWWPPWDSRKKLNCNYCETGGITQLCDRLGRALANSG 515

Query: 135 GDPPESVQKYVLDQCRKWNLVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRFKS 194
           G      QK +L  CR  NLVW G+ K+ P+EP+ ++ +LG+P NHTR      T+R + 
Sbjct: 516 GILTSQQQKDILRYCRGLNLVWTGKYKLGPIEPEHLDHILGYPLNHTRTDECDLTERLQL 575

Query: 195 LGNSFQVDTVAYHLSVLKDMYPKGINLLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVN 254
           L +SFQ DT+ YHLSVLK ++P G+ LLS+FSGIGGAEVALHRLGI +K +VSVE S   
Sbjct: 576 LKHSFQTDTLGYHLSVLKPIFPTGVTLLSIFSGIGGAEVALHRLGIKIKALVSVETSATK 635

Query: 255 RNIVRSWWEQTNQKGNLIDLEDVQQLDGDRLEQLMS 290
           R I+  WW  + Q G L+ +E++Q+L   + E L++
Sbjct: 636 RKILEKWWRSSGQSGTLVQIEEIQKLTSKKFENLIN 671