Miyakogusa Predicted Gene

Lj2g3v1438380.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1438380.2 Non Characterized Hit- tr|G7JXS7|G7JXS7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,68.49,5e-18,
,CUFF.37075.2
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g032790.1 | hypothetical protein | HC | chr5:14134331-1413...    95   1e-20
Medtr8g069350.1 | hypothetical protein | HC | chr8:29024208-2902...    95   1e-20
Medtr8g083450.1 | hypothetical protein | HC | chr8:43586486-4358...    50   3e-07
Medtr3g461010.1 | PGPS/D10 protein, putative | HC | chr3:2407012...    50   6e-07

>Medtr5g032790.1 | hypothetical protein | HC |
          chr5:14134331-14133326 | 20130731
          Length = 80

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 54/73 (73%), Gaps = 9/73 (12%)

Query: 1  MTTKDMKVEISSGNYVNTTGLMEIHSAQGELMRQPSMTKTNCLCSPTTHAGSFRCRLHRT 60
          MTTK+MKV+ISS N V           QG L+RQ SM K NCLCSPTTHAGSFRCRLHRT
Sbjct: 1  MTTKEMKVQISSRNDV---------IQQGGLLRQASMNKNNCLCSPTTHAGSFRCRLHRT 51

Query: 61 PSFQRTKSMESST 73
          PS  RTKSMESS+
Sbjct: 52 PSLIRTKSMESSS 64


>Medtr8g069350.1 | hypothetical protein | HC |
          chr8:29024208-29023460 | 20130731
          Length = 105

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 5/81 (6%)

Query: 1  MTTKDMKVEISSGNYVNTTGL-MEIHSA----QGELMRQPSMTKTNCLCSPTTHAGSFRC 55
          +T+K+MKVEI S + V ++ + +E+       QG LMRQPSMTKTNCLCSPTTH GSFRC
Sbjct: 6  ITSKEMKVEIQSRSEVMSSTIGVEVQGGSNMGQGGLMRQPSMTKTNCLCSPTTHPGSFRC 65

Query: 56 RLHRTPSFQRTKSMESSTRQD 76
          RLHR+PS QRTKS+E  +  D
Sbjct: 66 RLHRSPSLQRTKSIEPESIPD 86


>Medtr8g083450.1 | hypothetical protein | HC |
          chr8:43586486-43587041 | 20130731
          Length = 102

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 9/54 (16%)

Query: 36 SMTKTNCLCSPTTHAGSFRCRLHRTPSF---------QRTKSMESSTRQDAVGI 80
          S  K  CLCSPTTH GSFRCR HR+ SF         +RTKSM  +  +  V +
Sbjct: 46 SFPKGRCLCSPTTHEGSFRCRFHRSGSFSSSAPPPWMKRTKSMPPNHNKSVVSV 99


>Medtr3g461010.1 | PGPS/D10 protein, putative | HC |
          chr3:24070124-24070444 | 20130731
          Length = 106

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 29/43 (67%)

Query: 33 RQPSMTKTNCLCSPTTHAGSFRCRLHRTPSFQRTKSMESSTRQ 75
          R+ S  + NCLCSPTTHAGSFRCR HR+    R  S+ S+  Q
Sbjct: 49 RKSSSGRWNCLCSPTTHAGSFRCRHHRSSGMIRGGSVGSNLAQ 91