Miyakogusa Predicted Gene
- Lj2g3v1436930.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1436930.2 tr|G7KHW4|G7KHW4_MEDTR Cyclic nucleotide gated
channel OS=Medicago truncatula GN=MTR_6g072050 PE=4
S,70,3e-19,Voltage-gated potassium channels,NULL; seg,NULL; CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND L,CUFF.37064.2
(92 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g007630.1 | cyclic nucleotide-gated cation channel protein... 118 1e-27
Medtr6g477760.1 | cyclic nucleotide-gated cation channel protein... 102 8e-23
Medtr6g076060.1 | cyclic nucleotide-gated cation channel protein... 96 1e-20
Medtr6g075290.1 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.6 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.7 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.5 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.2 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.4 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075290.3 | cyclic nucleotide-gated cation channel protein... 92 9e-20
Medtr6g075440.2 | cyclic nucleotide gated channel protein | HC |... 91 2e-19
Medtr6g075440.1 | cyclic nucleotide gated channel protein | HC |... 91 2e-19
Medtr6g075390.1 | cyclic nucleotide gated channel protein | HC |... 89 7e-19
Medtr6g075410.1 | cyclic nucleotide gated channel protein | LC |... 88 2e-18
Medtr3g091080.1 | cyclic nucleotide-gated ion channel-like prote... 57 3e-09
Medtr1g028370.1 | cyclic nucleotide-gated ion channel-like prote... 54 3e-08
Medtr4g130820.1 | cyclic nucleotide-gated ion channel-like prote... 51 2e-07
Medtr4g130820.2 | cyclic nucleotide-gated ion channel-like prote... 51 2e-07
Medtr7g034605.1 | cyclic nucleotide-gated ion channel-like prote... 50 3e-07
Medtr2g460590.1 | cyclic nucleotide-gated ion channel-like prote... 50 4e-07
Medtr3g109030.1 | cyclic nucleotide-gated ion channel-like prote... 49 1e-06
Medtr8g027755.1 | cyclic nucleotide-gated ion channel-like prote... 47 4e-06
Medtr7g012260.1 | cyclic nucleotide-gated ion channel protein, p... 47 5e-06
Medtr4g058730.1 | cyclic nucleotide-gated ion channel protein, p... 46 9e-06
>Medtr5g007630.1 | cyclic nucleotide-gated cation channel protein |
HC | chr5:1434626-1440207 | 20130731
Length = 742
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 61/76 (80%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGNQVPSYFVWEVLFTMS NIQNFLQALGRR++EMQLRGRD
Sbjct: 445 QQISTMAGNQVPSYFVWEVLFTMSIIGLGLLLYALLIGNIQNFLQALGRRRVEMQLRGRD 504
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DL+R
Sbjct: 505 VEQWMSHRRLPEDLKR 520
>Medtr6g477760.1 | cyclic nucleotide-gated cation channel protein |
HC | chr6:28528572-28534464 | 20130731
Length = 700
Score = 102 bits (254), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 55/77 (71%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQIST+AG PSYFVWEVLFT++ NIQNFLQ LGRR+LEM LR R
Sbjct: 410 LQQISTLAGGLTPSYFVWEVLFTIAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMLLRSR 469
Query: 68 DVEQWMSHRRLPVDLRR 84
DVEQWM HRRLP DL+R
Sbjct: 470 DVEQWMRHRRLPEDLKR 486
>Medtr6g076060.1 | cyclic nucleotide-gated cation channel protein |
HC | chr6:28068562-28076091 | 20130731
Length = 506
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQ+ T+AGNQ PSYFVWEVLFTM NIQ F Q+LG R+LEM RGRD
Sbjct: 178 QQVITMAGNQAPSYFVWEVLFTMCIMALGLLLLALLIGNIQGFFQSLGMRRLEMICRGRD 237
Query: 69 VEQWMSHRRLPVDL-RRYKIFPFFS 92
VEQWM RRLP DL RR ++ ++S
Sbjct: 238 VEQWMRGRRLPEDLKRRVRVAEWYS 262
>Medtr6g075290.1 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27889382-27898162 | 20130731
Length = 566
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 274 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 333
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 334 VEQWMSH 340
>Medtr6g075290.6 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27889382-27898162 | 20130731
Length = 727
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 435 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 494
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 495 VEQWMSH 501
>Medtr6g075290.7 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27891070-27898162 | 20130731
Length = 566
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 274 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 333
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 334 VEQWMSH 340
>Medtr6g075290.5 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27890649-27898158 | 20130731
Length = 566
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 274 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 333
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 334 VEQWMSH 340
>Medtr6g075290.2 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27891022-27898162 | 20130731
Length = 566
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 274 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 333
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 334 VEQWMSH 340
>Medtr6g075290.4 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27891022-27898162 | 20130731
Length = 768
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 476 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 535
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 536 VEQWMSH 542
>Medtr6g075290.3 | cyclic nucleotide-gated cation channel protein |
HC | chr6:27889382-27898162 | 20130731
Length = 768
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 48/67 (71%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQIST+AGN PSYF+WEVLFTM NIQNFLQALG+R+LEM LR RD
Sbjct: 476 QQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRD 535
Query: 69 VEQWMSH 75
VEQWMSH
Sbjct: 536 VEQWMSH 542
>Medtr6g075440.2 | cyclic nucleotide gated channel protein | HC |
chr6:28025576-28035802 | 20130731
Length = 765
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 51/76 (67%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQI T+AGNQ PS WE+LFTMS IQ Q+L +RK+EMQLRGRD
Sbjct: 450 QQIITLAGNQTPSNSSWEILFTMSIMVLGLLYLAHLIGTIQTSNQSLAQRKVEMQLRGRD 509
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DL+R
Sbjct: 510 VEQWMSHRRLPEDLKR 525
>Medtr6g075440.1 | cyclic nucleotide gated channel protein | HC |
chr6:28025576-28036424 | 20130731
Length = 778
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 51/76 (67%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQI T+AGNQ PS WE+LFTMS IQ Q+L +RK+EMQLRGRD
Sbjct: 450 QQIITLAGNQTPSNSSWEILFTMSIMVLGLLYLAHLIGTIQTSNQSLAQRKVEMQLRGRD 509
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMSHRRLP DL+R
Sbjct: 510 VEQWMSHRRLPEDLKR 525
>Medtr6g075390.1 | cyclic nucleotide gated channel protein | HC |
chr6:27995366-28001759 | 20130731
Length = 674
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 49/76 (64%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQI T+AGNQ PSYFVWEVLFT+S NIQ F Q LG+R LE RG D
Sbjct: 393 QQIITLAGNQTPSYFVWEVLFTVSIMALGLILLALLIGNIQGFFQTLGKRSLEWLSRGSD 452
Query: 69 VEQWMSHRRLPVDLRR 84
VEQWMS R LP +L+R
Sbjct: 453 VEQWMSRRHLPENLKR 468
>Medtr6g075410.1 | cyclic nucleotide gated channel protein | LC |
chr6:28010395-28018753 | 20130731
Length = 665
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 9 QQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGRD 68
QQI T+AGNQ PSY++WEVLFTMS NIQ+FL+ L +R LEM RG D
Sbjct: 382 QQIITLAGNQTPSYYLWEVLFTMSIMALGLLLLIG---NIQSFLRTLSKRSLEMMHRGCD 438
Query: 69 VEQWMSHRRLPVDLR 83
VEQWM+H RLP DLR
Sbjct: 439 VEQWMNHHRLPEDLR 453
>Medtr3g091080.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr3:41388594-41396494 | 20130731
Length = 713
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S FVWE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 361 LKNLSSLGQNLATSTFVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRR 420
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP LR
Sbjct: 421 DAEQWMSHRLLPDHLR 436
>Medtr1g028370.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr1:9551891-9544996 | 20130731
Length = 716
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S WE+ F + N+Q +LQ+ R EM+++ R
Sbjct: 363 LKNLSSLGQNLATSTDFWEICFAIFIAIAGLVLFSFLIGNMQTYLQSTQTRLEEMRVKRR 422
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWMSHR LP DLR
Sbjct: 423 DAEQWMSHRLLPDDLR 438
>Medtr4g130820.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr4:54512958-54519466 | 20130731
Length = 731
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 383 LQNLSTLGQGLQTSTYPGEVIFSIALAIAGLILFALLIGNMQTYLQSLTLRLEEMRVKRR 442
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 443 DSEQWMHHRLLPKELR 458
>Medtr4g130820.2 | cyclic nucleotide-gated ion channel-like protein
| HC | chr4:54513153-54519428 | 20130731
Length = 731
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +ST+ S + EV+F+++ N+Q +LQ+L R EM+++ R
Sbjct: 383 LQNLSTLGQGLQTSTYPGEVIFSIALAIAGLILFALLIGNMQTYLQSLTLRLEEMRVKRR 442
Query: 68 DVEQWMSHRRLPVDLR 83
D EQWM HR LP +LR
Sbjct: 443 DSEQWMHHRLLPKELR 458
>Medtr7g034605.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr7:13115604-13111889 | 20130731
Length = 682
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S+ N + ++WE LF + N+Q +LQ++ R E ++R R
Sbjct: 331 LRNLSSYGQNLDTTTYLWETLFCIVLCIAGLVLFSLLIGNMQTYLQSMTVRLDEWRIRKR 390
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DL+
Sbjct: 391 DTEEWMRHRQLPPDLQ 406
>Medtr2g460590.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr2:24974220-24980506 | 20130731
Length = 691
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+QQ+S+ N + F+ E F + N+Q +LQ++ R E +L+ R
Sbjct: 331 LQQLSSYGQNLDTTTFIGETSFAIVIAILGLVLFAHLIGNMQTYLQSITIRLEEWRLKRR 390
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP DLR
Sbjct: 391 DTEEWMGHRQLPEDLR 406
>Medtr3g109030.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr3:50396507-50400895 | 20130731
Length = 726
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+Q +S+ + S FVWE F + N+Q +L+++ R E +L+ R
Sbjct: 361 LQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLESITVRLEEWRLKRR 420
Query: 68 DVEQWMSHRRLPVDLR 83
D E+WM HR+LP LR
Sbjct: 421 DTEEWMKHRQLPQFLR 436
>Medtr8g027755.1 | cyclic nucleotide-gated ion channel-like protein
| HC | chr8:10068749-10064518 | 20130731
Length = 722
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ N S ++ E++F + N+Q +LQ+ R EM+++ R
Sbjct: 370 LRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRR 429
Query: 68 DVEQWMSHRRLPVD----LRRYK 86
D EQWM HR LP +RRY+
Sbjct: 430 DAEQWMCHRMLPDHMKQRIRRYE 452
>Medtr7g012260.1 | cyclic nucleotide-gated ion channel protein,
putative | HC | chr7:3472899-3466189 | 20130731
Length = 710
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
+ +ST + P+ EV+F++ NIQ FL A+ +K +MQLR R
Sbjct: 400 LMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCR 459
Query: 68 DVEQWMSHRRLPVDLRR 84
D+E WM R+LP LR+
Sbjct: 460 DMEWWMRRRQLPSRLRQ 476
>Medtr4g058730.1 | cyclic nucleotide-gated ion channel protein,
putative | HC | chr4:21611170-21613905 | 20130731
Length = 620
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 8 MQQISTIAGNQVPSYFVWEVLFTMSXXXXXXXXXXXXXXNIQNFLQALGRRKLEMQLRGR 67
++ +S++ + S FV E++F + N+Q +LQ+ R E +++
Sbjct: 339 LRNLSSLGQGLLTSTFVGEIMFAIVIATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRT 398
Query: 68 DVEQWMSHRRLPVDLRR 84
D EQWM HR+LP +LR+
Sbjct: 399 DTEQWMHHRQLPQELRQ 415