Miyakogusa Predicted Gene

Lj2g3v1436870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1436870.1 Non Characterized Hit- tr|D8T1S9|D8T1S9_SELML
Putative uncharacterized protein OS=Selaginella moelle,31.91,4e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like; no
description,NULL; SUBFAMILY NOT ,CUFF.37047.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g027690.1 | SET domain protein | HC | chr6:9665535-9669113...    93   3e-19

>Medtr6g027690.1 | SET domain protein | HC | chr6:9665535-9669113 |
           20130731
          Length = 424

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 16/126 (12%)

Query: 16  FPIECAELVLPYLTPPELANVSMTCKSLRQVSHSITLRRSSDASRSFENFPV---PFLNT 72
           F ++ A L+LPYLT  +LAN+S+TCKSL +++  ITLRR SDASR+FEN+P+      N 
Sbjct: 21  FLVQHATLILPYLTHTQLANISLTCKSLYKLTQIITLRRISDASRTFENYPIPFFNTNNN 80

Query: 73  TYPPYAHFIYTPSLLLSSQHLPRQPWGGRSVISPAPALSAESVSLVDESG--RVVSGCDC 130
             PPY++F+YTPSL+LS      QPWG           + E   ++ + G  R   GCD 
Sbjct: 81  NNPPYSYFLYTPSLILSHNTPNYQPWG-----------AGEGAFVISDDGSVRFGVGCDF 129

Query: 131 RDACSD 136
              C +
Sbjct: 130 EGVCEN 135



 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 96  QPWGGRSVISPAPALSAESVSLVDESGRVVSGCDCRDACSD-CPCSCLDGLD-VXXXXXX 153
           +  G  SVISP P  + +     DES     GC+C   C D C C   DG+D +      
Sbjct: 190 ESGGMSSVISPVPLRTVDD----DESVSFGVGCECEGICDDECMCFSDDGVDGIGRECGL 245

Query: 154 XXXXXXXXXXXXXQKGVAVRVKIVR-DGRKGWALCADQFIRKGQFVFEYAGNL 205
                        Q GV VRVKIV   G KGW L A+Q +RK +F+F+YAG L
Sbjct: 246 DCLCGMECGNRVSQNGVNVRVKIVWCGGGKGWGLFANQVVRKEEFLFQYAGEL 298