Miyakogusa Predicted Gene
- Lj2g3v1415440.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1415440.3 tr|G7JYY7|G7JYY7_MEDTR Alanine aminotransferase
OS=Medicago truncatula GN=MTR_5g033230 PE=4 SV=1,91.42,0,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; no description,,CUFF.37209.3
(268 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g033230.1 | glutamate-glyoxylate aminotransferase | HC | c... 521 e-148
Medtr5g033230.2 | glutamate-glyoxylate aminotransferase | HC | c... 451 e-127
Medtr8g023140.1 | alanine aminotransferase | HC | chr8:8287522-8... 276 1e-74
Medtr3g103550.1 | 1-aminocyclopropane-1-carboxylate synthase | H... 48 1e-05
>Medtr5g033230.1 | glutamate-glyoxylate aminotransferase | HC |
chr5:14338389-14330114 | 20130731
Length = 481
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/268 (91%), Positives = 260/268 (97%)
Query: 1 MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
MVIINPGNPTGQCLS+ENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFIS+KKVLMD+
Sbjct: 214 MVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDI 273
Query: 61 GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
GPP+SKE QLV FHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI
Sbjct: 274 GPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 333
Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
FMGLM+NPPKPGDISYD+FVRESKG+LESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP
Sbjct: 334 FMGLMINPPKPGDISYDRFVRESKGVLESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 393
Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFHLRTTILPLEEE 240
QIKLPP+A+E AKQA KA DVYYCLKLLEATGISTVPGSGFGQK+G FHLRTTILP EEE
Sbjct: 394 QIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEE 453
Query: 241 MPAIMESFKNFNDEFMEQYEDNRGYSRL 268
MPAIM+SFK FND+FMEQY+D+RGYSRL
Sbjct: 454 MPAIMDSFKKFNDDFMEQYDDHRGYSRL 481
>Medtr5g033230.2 | glutamate-glyoxylate aminotransferase | HC |
chr5:14338220-14330873 | 20130731
Length = 474
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
MVIINPGNPTGQCLS+ENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFIS+KKVLMD+
Sbjct: 214 MVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDI 273
Query: 61 GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
GPP+SKE QLV FHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI
Sbjct: 274 GPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 333
Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
FMGLM+NPPKPGDISYD+FVRESKG+LESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP
Sbjct: 334 FMGLMINPPKPGDISYDRFVRESKGVLESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 393
Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFH 229
QIKLPP+A+E AKQA KA DVYYCLKLLEATGISTVPGSGFGQK+GY H
Sbjct: 394 QIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGYVH 442
>Medtr8g023140.1 | alanine aminotransferase | HC |
chr8:8287522-8280025 | 20130731
Length = 524
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 177/261 (67%), Gaps = 1/261 (0%)
Query: 1 MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
+ +INPGNPTGQ L+++N R +++FC +E LVLL DEVYQ N+Y E+ F S KKV M
Sbjct: 265 LAVINPGNPTGQVLAEDNQRAIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 324
Query: 61 GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
G + LV F SVSKGY GECG+RGGY E+T P+ ++IYKVAS++L N+ QI
Sbjct: 325 GYG-DNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQI 383
Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
L+++PPK GD SY+ F+ E IL SL RA+ + + N V CN EGAMY FP
Sbjct: 384 LASLIMSPPKVGDESYESFMAERGAILSSLTTRAKALEEALNKLEGVTCNKAEGAMYLFP 443
Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFHLRTTILPLEEE 240
+I+LP +AI+AA+ + APD +YC +LL ATGI VPGSGFGQ G +H R TILP E+
Sbjct: 444 RIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDR 503
Query: 241 MPAIMESFKNFNDEFMEQYED 261
+PAI+ F+ +FM+++ D
Sbjct: 504 IPAIVTRLTEFHQKFMDEFRD 524
>Medtr3g103550.1 | 1-aminocyclopropane-1-carboxylate synthase | HC |
chr3:47826474-47828998 | 20130731
Length = 481
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 32/260 (12%)
Query: 1 MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVL--- 57
++I NP NP G +++ L +++ F ++N+ ++ DE+Y ++ D F+S +V+
Sbjct: 194 VLITNPSNPLGITMTKSELHKLVDFALDKNIHIISDEIYSGTVF-DSPKFVSIMEVINER 252
Query: 58 MDMGPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVP 117
+ ISK +V +S+SK G G R G N V K++S L +
Sbjct: 253 IHENDEISKRVHIV--YSLSKD-LGVPGFRVGMIYSNN--KMVVSTATKMSSFGLISSQT 307
Query: 118 AQIFMGLMVNPPKPGDISYD-QFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAM 176
+ L+ GD + +++ E+K L++R +I+ G + + C + +
Sbjct: 308 QYLLANLL------GDDEFTFKYMDENK---RRLKKRKQILVTGLRNA-GISCLKSNAGL 357
Query: 177 YSFPQIK--LPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSG-FGQKDGYFHLRTT 233
+ + ++ L EA + K ++L G++ PGS + G+F +
Sbjct: 358 FCWVDMRHLLSSATFEAENELWK--------RILYQIGLNISPGSSCHCSEPGWFRICFA 409
Query: 234 ILPLEEEMPAIMESFKNFND 253
+ +E + M K F D
Sbjct: 410 NMS-QEALQVAMRRIKIFTD 428