Miyakogusa Predicted Gene

Lj2g3v1415440.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1415440.3 tr|G7JYY7|G7JYY7_MEDTR Alanine aminotransferase
OS=Medicago truncatula GN=MTR_5g033230 PE=4 SV=1,91.42,0,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; no description,,CUFF.37209.3
         (268 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g033230.1 | glutamate-glyoxylate aminotransferase | HC | c...   521   e-148
Medtr5g033230.2 | glutamate-glyoxylate aminotransferase | HC | c...   451   e-127
Medtr8g023140.1 | alanine aminotransferase | HC | chr8:8287522-8...   276   1e-74
Medtr3g103550.1 | 1-aminocyclopropane-1-carboxylate synthase | H...    48   1e-05

>Medtr5g033230.1 | glutamate-glyoxylate aminotransferase | HC |
           chr5:14338389-14330114 | 20130731
          Length = 481

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/268 (91%), Positives = 260/268 (97%)

Query: 1   MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
           MVIINPGNPTGQCLS+ENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFIS+KKVLMD+
Sbjct: 214 MVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDI 273

Query: 61  GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
           GPP+SKE QLV FHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI
Sbjct: 274 GPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 333

Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
           FMGLM+NPPKPGDISYD+FVRESKG+LESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP
Sbjct: 334 FMGLMINPPKPGDISYDRFVRESKGVLESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 393

Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFHLRTTILPLEEE 240
           QIKLPP+A+E AKQA KA DVYYCLKLLEATGISTVPGSGFGQK+G FHLRTTILP EEE
Sbjct: 394 QIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEE 453

Query: 241 MPAIMESFKNFNDEFMEQYEDNRGYSRL 268
           MPAIM+SFK FND+FMEQY+D+RGYSRL
Sbjct: 454 MPAIMDSFKKFNDDFMEQYDDHRGYSRL 481


>Medtr5g033230.2 | glutamate-glyoxylate aminotransferase | HC |
           chr5:14338220-14330873 | 20130731
          Length = 474

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/229 (93%), Positives = 223/229 (97%)

Query: 1   MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
           MVIINPGNPTGQCLS+ENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFIS+KKVLMD+
Sbjct: 214 MVIINPGNPTGQCLSEENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISAKKVLMDI 273

Query: 61  GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
           GPP+SKE QLV FHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI
Sbjct: 274 GPPLSKEVQLVSFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 333

Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
           FMGLM+NPPKPGDISYD+FVRESKG+LESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP
Sbjct: 334 FMGLMINPPKPGDISYDRFVRESKGVLESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 393

Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFH 229
           QIKLPP+A+E AKQA KA DVYYCLKLLEATGISTVPGSGFGQK+GY H
Sbjct: 394 QIKLPPKALETAKQAGKAADVYYCLKLLEATGISTVPGSGFGQKEGYVH 442


>Medtr8g023140.1 | alanine aminotransferase | HC |
           chr8:8287522-8280025 | 20130731
          Length = 524

 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/261 (50%), Positives = 177/261 (67%), Gaps = 1/261 (0%)

Query: 1   MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVLMDM 60
           + +INPGNPTGQ L+++N R +++FC +E LVLL DEVYQ N+Y  E+ F S KKV   M
Sbjct: 265 LAVINPGNPTGQVLAEDNQRAIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 324

Query: 61  GPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVPAQI 120
           G     +  LV F SVSKGY GECG+RGGY E+T   P+  ++IYKVAS++L  N+  QI
Sbjct: 325 GYG-DNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQI 383

Query: 121 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFP 180
              L+++PPK GD SY+ F+ E   IL SL  RA+ + +  N    V CN  EGAMY FP
Sbjct: 384 LASLIMSPPKVGDESYESFMAERGAILSSLTTRAKALEEALNKLEGVTCNKAEGAMYLFP 443

Query: 181 QIKLPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFHLRTTILPLEEE 240
           +I+LP +AI+AA+  + APD +YC +LL ATGI  VPGSGFGQ  G +H R TILP E+ 
Sbjct: 444 RIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDR 503

Query: 241 MPAIMESFKNFNDEFMEQYED 261
           +PAI+     F+ +FM+++ D
Sbjct: 504 IPAIVTRLTEFHQKFMDEFRD 524


>Medtr3g103550.1 | 1-aminocyclopropane-1-carboxylate synthase | HC |
           chr3:47826474-47828998 | 20130731
          Length = 481

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 32/260 (12%)

Query: 1   MVIINPGNPTGQCLSQENLREVLQFCYEENLVLLGDEVYQTNIYQDERPFISSKKVL--- 57
           ++I NP NP G  +++  L +++ F  ++N+ ++ DE+Y   ++ D   F+S  +V+   
Sbjct: 194 VLITNPSNPLGITMTKSELHKLVDFALDKNIHIISDEIYSGTVF-DSPKFVSIMEVINER 252

Query: 58  MDMGPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKVASISLSPNVP 117
           +     ISK   +V  +S+SK   G  G R G     N     V    K++S  L  +  
Sbjct: 253 IHENDEISKRVHIV--YSLSKD-LGVPGFRVGMIYSNN--KMVVSTATKMSSFGLISSQT 307

Query: 118 AQIFMGLMVNPPKPGDISYD-QFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAM 176
             +   L+      GD  +  +++ E+K     L++R +I+  G  +   + C  +   +
Sbjct: 308 QYLLANLL------GDDEFTFKYMDENK---RRLKKRKQILVTGLRNA-GISCLKSNAGL 357

Query: 177 YSFPQIK--LPPRAIEAAKQARKAPDVYYCLKLLEATGISTVPGSG-FGQKDGYFHLRTT 233
           + +  ++  L     EA  +  K        ++L   G++  PGS     + G+F +   
Sbjct: 358 FCWVDMRHLLSSATFEAENELWK--------RILYQIGLNISPGSSCHCSEPGWFRICFA 409

Query: 234 ILPLEEEMPAIMESFKNFND 253
            +  +E +   M   K F D
Sbjct: 410 NMS-QEALQVAMRRIKIFTD 428