Miyakogusa Predicted Gene

Lj2g3v1414970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1414970.1 tr|G7K086|G7K086_MEDTR Axial regulator YABBY
OS=Medicago truncatula GN=MTR_5g034030 PE=4 SV=1,86.18,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; YABBY,YABBY protein,CUFF.36981.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g034030.1 | YABBY transcription factor | HC | chr5:1470182...   393   e-110
Medtr4g114730.1 | plant-specific transcription factor YABBY fami...   149   2e-36
Medtr2g087740.1 | plant-specific transcription factor YABBY fami...   147   1e-35
Medtr4g025900.1 | plant-specific transcription factor YABBY fami...   138   4e-33
Medtr4g050300.1 | plant-specific transcription factor YABBY fami...   136   2e-32
Medtr4g101660.1 | plant-specific transcription factor YABBY fami...   135   4e-32
Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-lik...   112   2e-25

>Medtr5g034030.1 | YABBY transcription factor | HC |
           chr5:14701820-14703695 | 20130731
          Length = 217

 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/217 (87%), Positives = 200/217 (92%), Gaps = 1/217 (0%)

Query: 1   MSTLNHLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFV 60
           MSTLNHLFDLPEQICYVQCGFC TILMVSVPCSSL+MVVTVRCGHCTSLLSVNMMKASFV
Sbjct: 1   MSTLNHLFDLPEQICYVQCGFCNTILMVSVPCSSLTMVVTVRCGHCTSLLSVNMMKASFV 60

Query: 61  PFHLLASLTHLQPKESSA-EEDANMTFNSHSGASMMTYSDCEEEDLIPMSNFVNKPPEKR 119
           PFHLLASLTHL+ KESS+ +EDAN T NS++ ASMMTYSDCEE+D+IP+SN VNKPPEKR
Sbjct: 61  PFHLLASLTHLEQKESSSPDEDANKTLNSNTSASMMTYSDCEEDDVIPISNVVNKPPEKR 120

Query: 120 QRTPSAYNRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKGDEEGGSQNDQLA 179
           QRTPSAYNRFIKEEIKRLKA+NPDMAHKEAFSTAAKNWAN PPTQCKGDEE  SQ DQ  
Sbjct: 121 QRTPSAYNRFIKEEIKRLKAKNPDMAHKEAFSTAAKNWANCPPTQCKGDEESCSQTDQFV 180

Query: 180 DLDSHVDPLDDEVNEEGQGFRGRKVPRNSILERTPFE 216
           DLDS VDP + EVNEE QGFRGRKVPRNSILERTPFE
Sbjct: 181 DLDSQVDPNEAEVNEEEQGFRGRKVPRNSILERTPFE 217


>Medtr4g114730.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:47236664-47232867 | 20130731
          Length = 191

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 97/151 (64%), Gaps = 7/151 (4%)

Query: 12  EQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKA-SFVPFHLLASLTH 70
           EQ+CY+ C FC  +L VSVPCSSL  +VTVRCGHCT+L SVNM  A   + +  + + +H
Sbjct: 14  EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQAPSH 73

Query: 71  LQPKESSAEEDANMTFNSHSGASMMTYSDCEEEDLIPMSNFVNKPPEKRQRTPSAYNRFI 130
               E      +    N          +   EE +      VN+PPEKRQR PSAYN+FI
Sbjct: 74  CMNPEYRIRTSSTPKCNDRIAMRSAPTTHVTEERV------VNRPPEKRQRVPSAYNQFI 127

Query: 131 KEEIKRLKAENPDMAHKEAFSTAAKNWANFP 161
           KEEI+R+KA NPD++H+EAFSTAAKNWA+FP
Sbjct: 128 KEEIQRIKANNPDISHREAFSTAAKNWAHFP 158


>Medtr2g087740.1 | plant-specific transcription factor YABBY family
           protein | HC | chr2:36921389-36915323 | 20130731
          Length = 195

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/192 (46%), Positives = 113/192 (58%), Gaps = 13/192 (6%)

Query: 12  EQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHL 71
           E++CYV C FC T L VSVPCSSL  +VTVRCGHC +LLSVNM   S   F         
Sbjct: 12  ERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGATSLQSFTPQQDHPQK 71

Query: 72  QPKESSAEEDANMTFNSHSGASMMTYSDCEE-EDLI---PMSNFVNKPPEKRQRTPSAYN 127
           Q   +  +E +       S +S  + S C+  + L+   P +  + +PPEKRQR PSAYN
Sbjct: 72  QQLINCHQEASRKEVVGSSSSSSSSSSKCKAFQPLVHEQPRTPPI-RPPEKRQRVPSAYN 130

Query: 128 RFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKGDEEGGSQNDQLADLDSHVDP 187
           RFIKEEI+R+KA NPD++H+EAFSTAAKNWA+FP        +G  Q    A LD  V  
Sbjct: 131 RFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQ----AKLDHGV-- 184

Query: 188 LDDEVNEEGQGF 199
              E  ++  GF
Sbjct: 185 --GEATQKSNGF 194


>Medtr4g025900.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:8885604-8888552 | 20130731
          Length = 221

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 7/155 (4%)

Query: 14  ICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASF-VPFHLLASLTHLQ 72
           +CYV C FC T+L VSVPC+SL   VTVRCGHCT+LLSVNM       P  L    T+  
Sbjct: 25  LCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFN 84

Query: 73  PK----ESSAEEDANMTFNSHSGAS--MMTYSDCEEEDLIPMSNFVNKPPEKRQRTPSAY 126
           P+    E       NM  N     +  MM        + IP     N+PPEKRQR PSAY
Sbjct: 85  PQTLMEEIRNAPSTNMMMNQLPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAY 144

Query: 127 NRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFP 161
           NRFIK+EI+R+KA NPD++H+EAFS AAKNWA+FP
Sbjct: 145 NRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFP 179


>Medtr4g050300.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:17796569-17804302 | 20130731
          Length = 179

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 103/171 (60%), Gaps = 15/171 (8%)

Query: 12  EQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHL 71
           E++CYV C FC TIL V+VP SSL  +VTVRCGHC +LLSVNM+     P          
Sbjct: 9   ERVCYVHCNFCNTILAVNVPYSSLLTIVTVRCGHCANLLSVNMVAPLLQP--FPPPQLPQ 66

Query: 72  QPKESSAEEDANMTFNSHSGAS---MMTYSDCEEEDLIPMSNFVNKPPEKRQRTPSAYNR 128
             K+   +E+A+      S +    + ++   E   + P+     +P EKR R PSAYNR
Sbjct: 67  PQKQHIIDEEASSKEIGSSSSKCNKIASFEAVEHPRIPPI-----RPIEKRHRVPSAYNR 121

Query: 129 FIKEEIKRLKAENPDMAHKEAFSTAAKNWANFP-----PTQCKGDEEGGSQ 174
           FIKEEI+R+KA NPD++H+EAFS+AAKNWA+FP       Q K D   G++
Sbjct: 122 FIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGKQQAKLDHGEGTR 172


>Medtr4g101660.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:42026521-42023461 | 20130731
          Length = 218

 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 99/158 (62%), Gaps = 9/158 (5%)

Query: 12  EQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVP----FHLLAS 67
           EQ+CYV C  C TIL VSVPC+SL   VTVRCGHCT+LL VNM +A  +P    FHL  S
Sbjct: 18  EQLCYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPVNM-RALLLPSPNQFHLGHS 76

Query: 68  L---THLQPKESSAEEDANMTFNSHSGASMMTYSDCEE-EDLIPMSNFVNKPPEKRQRTP 123
               TH    E       N   N  +  +  +        D +P    +N+PPEKRQR P
Sbjct: 77  FFSPTHHNLLEEMPNPAPNFMMNHINAPNDFSMPPTRTVADELPRPPIINRPPEKRQRVP 136

Query: 124 SAYNRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFP 161
           SAYNRFIK+EI+R+K+ NPD+ H+EAFS AAKNWA+FP
Sbjct: 137 SAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFP 174


>Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-like
           protein | HC | chr5:20267886-20271029 | 20130731
          Length = 216

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 92/193 (47%), Gaps = 24/193 (12%)

Query: 12  EQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHL 71
           + +CYV+C FC T+L V +PC  L   VTV+CGHC++L        SF        LT  
Sbjct: 17  QHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNL--------SF--------LTTR 60

Query: 72  QPKESSAEEDANMTFNSHSGASMMTYSDCEEEDLIPMSN------FVNKPPEKRQRTPSA 125
            P   +   D  ++      +     S          S       FV KPPEK+ R PSA
Sbjct: 61  PPSSKNQTVDHTLSLQGIYSSKKGQPSSSSSPTTSTESLSPRPPPFVVKPPEKKHRLPSA 120

Query: 126 YNRFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKGDEEGGSQNDQLA--DLDS 183
           YNRF+KEEI+R+K  NP + H+EAFS AAKNWA + P           +N       L  
Sbjct: 121 YNRFMKEEIQRIKVANPQIPHREAFSAAAKNWARYIPNSPTSSISATKRNIVFVRFRLSD 180

Query: 184 HVDPLDDEVNEEG 196
            +    D++N+ G
Sbjct: 181 QLQSSADQINDFG 193