Miyakogusa Predicted Gene

Lj2g3v1414880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1414880.1 tr|Q0D9M7|Q0D9M7_ORYSJ Os06g0708200 protein
OS=Oryza sativa subsp. japonica GN=Os06g0708200 PE=4
SV=,45.45,0.000000002,seg,NULL,CUFF.36978.1
         (364 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g034180.1 | hypothetical protein | HC | chr5:14788667-1478...   492   e-139

>Medtr5g034180.1 | hypothetical protein | HC |
           chr5:14788667-14782542 | 20130731
          Length = 475

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/332 (74%), Positives = 268/332 (80%), Gaps = 2/332 (0%)

Query: 1   MEFSSVQKLCLHLISLAYRRCRLSEQICXXXXXXXXXXXXXXXXXXXXXDTGIGSCLEEF 60
           MEFSS QKLCLHLIS AY+RCRLSEQIC                     DTGIGS LEEF
Sbjct: 1   MEFSSSQKLCLHLISSAYQRCRLSEQICRLSVILTRSSSSSPSLRISISDTGIGSSLEEF 60

Query: 61  QELRFSSTDVADNWDGVLSIKTTSISDTEIYNYQINLKGSGSSRITRLPSDMKNGAIFSG 120
           Q LR S T+ ADNWDG+LSIKTTSI+D+EI+NYQINLK SGSSRIT L SD KNGA FSG
Sbjct: 61  QNLRVSFTNAADNWDGMLSIKTTSINDSEIHNYQINLKESGSSRITSLTSDSKNGAKFSG 120

Query: 121 TEVCLSPIISLDLLVAEIHSFVQKMLVLRIPNVAIQLVAEDCDVLGSRYEKVFPANMCND 180
           +EVCLS  ++ DLL+AEIHS ++K+L+L IPNVAIQLV+ED DV  SRYEKVF AN C  
Sbjct: 121 SEVCLSSFVNSDLLLAEIHSLLEKVLILNIPNVAIQLVSEDFDVPESRYEKVFLANTCKQ 180

Query: 181 LSIPAANLERLMSGLEDYVLKHGNNLSDKCNSCFPSWETLKVGSGVVCCTENRLHTELVM 240
           L I A++LE L  GL DYVLKHGNNLS KCNSCF SWE LKV  GV CCTENRLHTELVM
Sbjct: 181 LPISASSLELLKFGLGDYVLKHGNNLSIKCNSCFTSWEDLKV--GVACCTENRLHTELVM 238

Query: 241 EAVIILSNISIQNTTCLREYGDKTEVLYFKDFSPCTMSQSSMKALKGIGWKRYGLHLGGI 300
           EAVI++SN+SIQNTTC REYGDKTEVLYFKDFSPC MSQSSMKALK I WKRYGLHLGGI
Sbjct: 239 EAVIVISNMSIQNTTCFREYGDKTEVLYFKDFSPCAMSQSSMKALKSIDWKRYGLHLGGI 298

Query: 301 VEKDGFAILEWENLPSDTHIDIVLHSYHKQYP 332
           VE DG A+LEWENLP+DTHIDIVLHSY KQYP
Sbjct: 299 VELDGTALLEWENLPTDTHIDIVLHSYLKQYP 330