Miyakogusa Predicted Gene

Lj2g3v1389570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1389570.1 tr|A9RN15|A9RN15_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_160063,43.59,2e-17,DUF3685,Uncharacterised protein
family Ycf55,CUFF.36955.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g058760.2 | DUF3685 family protein | HC | chr7:21175459-21...   229   7e-61
Medtr7g058760.3 | DUF3685 family protein | HC | chr7:21175492-21...   229   7e-61
Medtr7g058760.1 | DUF3685 family protein | HC | chr7:21175492-21...   229   7e-61

>Medtr7g058760.2 | DUF3685 family protein | HC |
           chr7:21175459-21166251 | 20130731
          Length = 512

 Score =  229 bits (583), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 121/130 (93%), Gaps = 1/130 (0%)

Query: 1   MDTVVSMYEDRFDLCILDSQPIEL-ENSQTEKQSWWKRLTQQNSKTMSPELHCIVISLFS 59
           MDTVVSMYEDRFDLC L+SQPI+L ++SQT+KQSWWK LTQQ SKTMS EL+CI I+ FS
Sbjct: 383 MDTVVSMYEDRFDLCTLESQPIDLPDSSQTDKQSWWKNLTQQRSKTMSHELYCIAINHFS 442

Query: 60  MPIKRTKELRALTGWRYYFSLFLELSDITMPLIRAVVDKASEAISFFLVSLIGRSLGLIY 119
           MPIKRTKELRALTGWRYYFSL LELSDITMP++R V++KASEAISFFLVSLIGRSLGLIY
Sbjct: 443 MPIKRTKELRALTGWRYYFSLLLELSDITMPIVRTVINKASEAISFFLVSLIGRSLGLIY 502

Query: 120 TGIRQSLKWK 129
           TGIRQSLKWK
Sbjct: 503 TGIRQSLKWK 512


>Medtr7g058760.3 | DUF3685 family protein | HC |
           chr7:21175492-21166212 | 20130731
          Length = 515

 Score =  229 bits (583), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 121/130 (93%), Gaps = 1/130 (0%)

Query: 1   MDTVVSMYEDRFDLCILDSQPIEL-ENSQTEKQSWWKRLTQQNSKTMSPELHCIVISLFS 59
           MDTVVSMYEDRFDLC L+SQPI+L ++SQT+KQSWWK LTQQ SKTMS EL+CI I+ FS
Sbjct: 386 MDTVVSMYEDRFDLCTLESQPIDLPDSSQTDKQSWWKNLTQQRSKTMSHELYCIAINHFS 445

Query: 60  MPIKRTKELRALTGWRYYFSLFLELSDITMPLIRAVVDKASEAISFFLVSLIGRSLGLIY 119
           MPIKRTKELRALTGWRYYFSL LELSDITMP++R V++KASEAISFFLVSLIGRSLGLIY
Sbjct: 446 MPIKRTKELRALTGWRYYFSLLLELSDITMPIVRTVINKASEAISFFLVSLIGRSLGLIY 505

Query: 120 TGIRQSLKWK 129
           TGIRQSLKWK
Sbjct: 506 TGIRQSLKWK 515


>Medtr7g058760.1 | DUF3685 family protein | HC |
           chr7:21175492-21166212 | 20130731
          Length = 515

 Score =  229 bits (583), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 121/130 (93%), Gaps = 1/130 (0%)

Query: 1   MDTVVSMYEDRFDLCILDSQPIEL-ENSQTEKQSWWKRLTQQNSKTMSPELHCIVISLFS 59
           MDTVVSMYEDRFDLC L+SQPI+L ++SQT+KQSWWK LTQQ SKTMS EL+CI I+ FS
Sbjct: 386 MDTVVSMYEDRFDLCTLESQPIDLPDSSQTDKQSWWKNLTQQRSKTMSHELYCIAINHFS 445

Query: 60  MPIKRTKELRALTGWRYYFSLFLELSDITMPLIRAVVDKASEAISFFLVSLIGRSLGLIY 119
           MPIKRTKELRALTGWRYYFSL LELSDITMP++R V++KASEAISFFLVSLIGRSLGLIY
Sbjct: 446 MPIKRTKELRALTGWRYYFSLLLELSDITMPIVRTVINKASEAISFFLVSLIGRSLGLIY 505

Query: 120 TGIRQSLKWK 129
           TGIRQSLKWK
Sbjct: 506 TGIRQSLKWK 515