Miyakogusa Predicted Gene
- Lj2g3v1375540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1375540.1 Non Characterized Hit- tr|C6TM45|C6TM45_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25554
PE,89.67,0,FA_hydroxylase,Fatty acid hydroxylase; SUBFAMILY NOT
NAMED,NULL; STEROL DESATURASE,NULL; seg,NULL,CUFF.36899.1
(309 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g063210.1 | C-4 methylsterol oxidase | HC | chr8:26467122-... 501 e-142
Medtr5g035190.1 | C-4 methylsterol oxidase | HC | chr5:15313529-... 498 e-141
Medtr6g039970.1 | C-4 methylsterol oxidase | HC | chr6:14370848-... 473 e-133
Medtr5g035190.2 | C-4 methylsterol oxidase | HC | chr5:15314728-... 399 e-111
Medtr4g102060.1 | sterol C4-methyl oxidase 1-2 | HC | chr4:42239... 213 2e-55
Medtr7g074900.1 | C-4 methylsterol oxidase | HC | chr7:28035902-... 208 5e-54
Medtr2g060330.1 | 4-alpha-methyl-sterol C4-methyl-oxidase, putat... 86 3e-17
Medtr5g040320.1 | sphingoid base hydroxylase-like protein | HC |... 70 4e-12
Medtr1g097310.2 | sphingoid base hydroxylase-like protein | HC |... 64 1e-10
Medtr1g097310.1 | sphingoid base hydroxylase-like protein | HC |... 64 1e-10
>Medtr8g063210.1 | C-4 methylsterol oxidase | HC |
chr8:26467122-26463827 | 20130731
Length = 271
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/268 (88%), Positives = 253/268 (94%)
Query: 42 IIESGWQYLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWMSKYKIQAKNNSSA 101
IIES WQYLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGW+SKYKIQAK NS
Sbjct: 4 IIESAWQYLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWLSKYKIQAKTNSRE 63
Query: 102 AQEKCIVRLLIYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFYFILEDFIF 161
++E+CI+RLL+YHFGVNLPVM+ SYPVFK+MGM+SSLPLPSW +VLTQIIFYFILEDF+F
Sbjct: 64 SEERCIIRLLVYHFGVNLPVMIFSYPVFKYMGMQSSLPLPSWRVVLTQIIFYFILEDFVF 123
Query: 162 YWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPAITGPHLMTL 221
YWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATI GPAITGPHL+TL
Sbjct: 124 YWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITL 183
Query: 222 WLWMVLRVLETVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDR 281
WLWMVLRVLETVEAH GYHFPWSPSNF PLYGG+DFHDYHHRLLYTKSGNYSSTFTYMDR
Sbjct: 184 WLWMVLRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDR 243
Query: 282 IFGTDVGYRKLKALKNTGVEDISKKRNN 309
IFGTD+GYRKLKALKN VE S+++
Sbjct: 244 IFGTDIGYRKLKALKNAEVEYSSEQKKQ 271
>Medtr5g035190.1 | C-4 methylsterol oxidase | HC |
chr5:15313529-15317196 | 20130731
Length = 271
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/268 (87%), Positives = 254/268 (94%)
Query: 42 IIESGWQYLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWMSKYKIQAKNNSSA 101
I ESGWQYLIT+FSDFQLACLGSFFLHESVFFLSGLPF+W+ERAGW+SKYKIQAKNNS
Sbjct: 4 IFESGWQYLITHFSDFQLACLGSFFLHESVFFLSGLPFVWIERAGWLSKYKIQAKNNSPE 63
Query: 102 AQEKCIVRLLIYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFYFILEDFIF 161
AQ+KCIVRLL+YHFGVNLPVM+ SYPVF++MGM+SSLPLPSWNI+LTQI+FYFILEDFIF
Sbjct: 64 AQDKCIVRLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPSWNIILTQIMFYFILEDFIF 123
Query: 162 YWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPAITGPHLMTL 221
YWGHRILHTKWLYKH+HSVHHEYATPFGLTSEYAHPAEILFLGFATI GPAITGPHL+TL
Sbjct: 124 YWGHRILHTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITL 183
Query: 222 WLWMVLRVLETVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDR 281
WLWMV+RVLETVEAH GYHFPWSPSNF PLYGG+DFHDYHHRLLYTKSGNYSSTFTYMDR
Sbjct: 184 WLWMVVRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDR 243
Query: 282 IFGTDVGYRKLKALKNTGVEDISKKRNN 309
IFGTDVGYRKLKALK+ ED +++
Sbjct: 244 IFGTDVGYRKLKALKSREFEDSYEQKKQ 271
>Medtr6g039970.1 | C-4 methylsterol oxidase | HC |
chr6:14370848-14368250 | 20130731
Length = 271
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/268 (83%), Positives = 242/268 (90%)
Query: 42 IIESGWQYLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWMSKYKIQAKNNSSA 101
IIES WQYLI NFSDFQLAC G+FFLHE VFFLSGLPFIWLERAGW+S YKIQ K NS
Sbjct: 4 IIESAWQYLIINFSDFQLACFGTFFLHEIVFFLSGLPFIWLERAGWLSNYKIQTKINSPE 63
Query: 102 AQEKCIVRLLIYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFYFILEDFIF 161
++E+CI+RLL+ HFGVNLP M+ SYPVFK+MGM SSLPLPSW +VLTQIIFYFILEDF+F
Sbjct: 64 SKERCIIRLLVLHFGVNLPAMIFSYPVFKYMGMHSSLPLPSWRVVLTQIIFYFILEDFLF 123
Query: 162 YWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPAITGPHLMTL 221
YW HRI+HTKWLYKHVH VHHEYATPFGLTSEY HPAEILFLGF T+ GPAITGPHL+TL
Sbjct: 124 YWEHRIMHTKWLYKHVHRVHHEYATPFGLTSEYGHPAEILFLGFPTMLGPAITGPHLITL 183
Query: 222 WLWMVLRVLETVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDR 281
WL+ VLRVLETVEAH GYHFPWSPSNF PLYGGADFHDYHHR+LYTKSGNYSSTFTYMDR
Sbjct: 184 WLYTVLRVLETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRVLYTKSGNYSSTFTYMDR 243
Query: 282 IFGTDVGYRKLKALKNTGVEDISKKRNN 309
IFGTD+GYRKLKALKNTGVE S++ N
Sbjct: 244 IFGTDIGYRKLKALKNTGVEYSSEQMNQ 271
>Medtr5g035190.2 | C-4 methylsterol oxidase | HC |
chr5:15314728-15317193 | 20130731
Length = 217
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 204/217 (94%)
Query: 93 IQAKNNSSAAQEKCIVRLLIYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIF 152
+QAKNNS AQ+KCIVRLL+YHFGVNLPVM+ SYPVF++MGM+SSLPLPSWNI+LTQI+F
Sbjct: 1 MQAKNNSPEAQDKCIVRLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPSWNIILTQIMF 60
Query: 153 YFILEDFIFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPA 212
YFILEDFIFYWGHRILHTKWLYKH+HSVHHEYATPFGLTSEYAHPAEILFLGFATI GPA
Sbjct: 61 YFILEDFIFYWGHRILHTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPA 120
Query: 213 ITGPHLMTLWLWMVLRVLETVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNY 272
ITGPHL+TLWLWMV+RVLETVEAH GYHFPWSPSNF PLYGG+DFHDYHHRLLYTKSGNY
Sbjct: 121 ITGPHLITLWLWMVVRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNY 180
Query: 273 SSTFTYMDRIFGTDVGYRKLKALKNTGVEDISKKRNN 309
SSTFTYMDRIFGTDVGYRKLKALK+ ED +++
Sbjct: 181 SSTFTYMDRIFGTDVGYRKLKALKSREFEDSYEQKKQ 217
>Medtr4g102060.1 | sterol C4-methyl oxidase 1-2 | HC |
chr4:42239567-42243413 | 20130731
Length = 303
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 152/251 (60%), Gaps = 4/251 (1%)
Query: 55 SDFQLACLGSFFLHESVFFLSGLPFIWLE--RAGWMSKYKIQAKNNSSAAQE-KCIVRLL 111
SD+ L C FL +F L LP ++LE R +YKIQ K S + C +L
Sbjct: 33 SDYFLFCHNILFLF-LIFSLVPLPLVFLEIKRLYPFDEYKIQPKVRLSLHEMLNCYKDVL 91
Query: 112 IYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFYFILEDFIFYWGHRILHTK 171
F V P+ L+SYP K +G+R+ LPLPS +L+Q++ YF++ED+ YW HR LH K
Sbjct: 92 KMFFLVVGPLQLISYPSIKMIGIRTGLPLPSGFEILSQLLVYFLVEDYTNYWIHRFLHNK 151
Query: 172 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPAITGPHLMTLWLWMVLRVLE 231
W Y+ +H VHHEY P G + YAH AEIL LG + GPA+ H++T WLW+ LR +E
Sbjct: 152 WGYEKIHRVHHEYQAPIGFAAPYAHWAEILILGIPSFLGPAMVPGHMITFWLWIALRQVE 211
Query: 232 TVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDRIFGTDVGYRK 291
++ HSGY FPW+P+ + P YGGA+ HDYHH + N++S FTY D I+GTD G+R
Sbjct: 212 AIDTHSGYDFPWNPTKYIPFYGGAEHHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGFRY 271
Query: 292 LKALKNTGVED 302
K + ED
Sbjct: 272 QKKILQKLKED 282
>Medtr7g074900.1 | C-4 methylsterol oxidase | HC |
chr7:28035902-28030735 | 20130731
Length = 293
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 158/256 (61%), Gaps = 6/256 (2%)
Query: 44 ESGWQYLITNFSDFQLACLGSFFLHESVFF-LSGLPFIWLERAGW--MSKYKIQAKNNSS 100
E+ W +DF L C + FL +F+ ++ +PF+ +E +G+ ++KYKIQ N +
Sbjct: 22 ETLWFNYSAKKTDFVLHCHNTLFL--CLFYSIAPIPFVLIELSGYKKLNKYKIQPSVNKT 79
Query: 101 AAQEKCIVRLLIYHFGVNL-PVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFYFILEDF 159
+ + +++ F + + P+ ++SYP K +G+R+ LPLPS + +I Y I+ED+
Sbjct: 80 LLEMFKCYKYVMWTFIIAVGPLQIISYPTIKWLGIRTGLPLPSGWELFWHLIVYVIIEDY 139
Query: 160 IFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGPAITGPHLM 219
+ YW HR+LH KW + ++H VHHEY TP L + YAH +EIL LGF GPA+ H+
Sbjct: 140 VNYWFHRMLHNKWAFDNIHKVHHEYKTPIALAAPYAHWSEILILGFPAFLGPALVPGHIT 199
Query: 220 TLWLWMVLRVLETVEAHSGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTFTYM 279
T WLW +LR LE +E HSGY PWSP+ + P YGG +HDYHH + GN++S FTY
Sbjct: 200 TYWLWFILRQLEAIETHSGYELPWSPTKYIPFYGGPAYHDYHHYVGGRSQGNFASVFTYC 259
Query: 280 DRIFGTDVGYRKLKAL 295
D I+GT GY+ K +
Sbjct: 260 DYIYGTIKGYQYKKRM 275
>Medtr2g060330.1 | 4-alpha-methyl-sterol C4-methyl-oxidase,
putative | HC | chr2:24846470-24846637 | 20130731
Length = 55
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 42/46 (91%)
Query: 49 YLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWMSKYKIQ 94
YLIT FSDFQLACLGSFFLHESVFFL GLPFIW ERA W+SKYKIQ
Sbjct: 10 YLITKFSDFQLACLGSFFLHESVFFLFGLPFIWFERAEWLSKYKIQ 55
>Medtr5g040320.1 | sphingoid base hydroxylase-like protein | HC |
chr5:17732499-17735533 | 20130731
Length = 263
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 94 QAKNNSSAAQEKCIVRLLIYHFGVNLPVMLLSYPVFKHMGMRSSLPLPSWNIVLTQIIFY 153
Q +++ + + +V+ ++ V V L + V S+ S ++ Q I
Sbjct: 46 QDEDDKNLVSKFDVVKGVLLQQAVQAVVATLLFAVTGSDSQSSTNENTSLLVLARQFITA 105
Query: 154 FILEDFIFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGP- 211
++ D Y+ HR +H K+LYKH+HS+HH P+ + Y HP E L L TI G
Sbjct: 106 MLVMDTWQYFMHRYMHQNKFLYKHIHSLHHRLIVPYSFGALYNHPIEGLLLD--TIGGAL 163
Query: 212 --AITGPHLMTLWLWMVLRVLETVEAHSGYHFPWSPSNFFPLY--GGADFHDYHHRLLYT 267
++G + ++TV+ H G W P N F ++ + +HD HH+ LY
Sbjct: 164 SFLLSGMSPRASIFFFSFATIKTVDDHCGL---WLPGNLFHMFFNNNSAYHDVHHQ-LYG 219
Query: 268 KSGNYSSTFTYM-DRIFGTDVGYRKLKALKNTGVE 301
N+S F M D+I GT + Y L+ + G E
Sbjct: 220 NKYNFSQPFFVMWDKILGTHMPY-SLEKRASGGFE 253
>Medtr1g097310.2 | sphingoid base hydroxylase-like protein | HC |
chr1:43897435-43901038 | 20130731
Length = 255
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 162 YWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGP---AITGPH 217
Y+ HR +H K+LY+H+HS HH P+ + + Y HP E L L T+ G ++G
Sbjct: 110 YFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPIEGLLLD--TVGGALSFLVSGMT 167
Query: 218 LMTLWLWMVLRVLETVEAHSGYHFPWSPSNFFPLY--GGADFHDYHHRLLYTKSGNYSST 275
T ++ V++TV+ H G W P N F L+ +HD HH+L K NYS
Sbjct: 168 ARTAVIFFCFAVVKTVDDHCGL---WLPGNIFHLFFQNNTAYHDIHHQLQGLKY-NYSQP 223
Query: 276 FTYM-DRIFGTDVGYRKLK 293
F + D+I GT + + +K
Sbjct: 224 FFPIWDKILGTYMPFNLVK 242
>Medtr1g097310.1 | sphingoid base hydroxylase-like protein | HC |
chr1:43897127-43901038 | 20130731
Length = 255
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 162 YWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIFGP---AITGPH 217
Y+ HR +H K+LY+H+HS HH P+ + + Y HP E L L T+ G ++G
Sbjct: 110 YFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPIEGLLLD--TVGGALSFLVSGMT 167
Query: 218 LMTLWLWMVLRVLETVEAHSGYHFPWSPSNFFPLY--GGADFHDYHHRLLYTKSGNYSST 275
T ++ V++TV+ H G W P N F L+ +HD HH+L K NYS
Sbjct: 168 ARTAVIFFCFAVVKTVDDHCGL---WLPGNIFHLFFQNNTAYHDIHHQLQGLKY-NYSQP 223
Query: 276 FTYM-DRIFGTDVGYRKLK 293
F + D+I GT + + +K
Sbjct: 224 FFPIWDKILGTYMPFNLVK 242