Miyakogusa Predicted Gene

Lj2g3v1374500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1374500.1 tr|F2EKY1|F2EKY1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,44.34,3e-18,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.36861.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g035430.1 | DUF4228 domain protein | HC | chr5:15407370-15...   192   2e-49
Medtr8g063200.1 | DUF4228 domain protein | HC | chr8:26461240-26...   176   1e-44
Medtr3g078300.1 | DUF4228 domain protein | HC | chr3:35276942-35...   128   3e-30
Medtr4g106790.1 | DUF4228 domain protein | HC | chr4:44080648-44...   119   1e-27
Medtr4g106790.2 | DUF4228 domain protein | HC | chr4:44080648-44...   111   4e-25
Medtr3g078300.2 | DUF4228 domain protein | HC | chr3:35276942-35...   108   2e-24
Medtr4g097220.1 | DUF4228 domain protein | HC | chr4:40063713-40...   101   4e-22
Medtr4g097220.2 | DUF4228 domain protein | HC | chr4:40063713-40...    95   3e-20

>Medtr5g035430.1 | DUF4228 domain protein | HC |
           chr5:15407370-15405451 | 20130731
          Length = 173

 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/175 (62%), Positives = 126/175 (72%), Gaps = 9/175 (5%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
           MGNCQAVDAAVLVIQHP GKI+R+YWP+TASEVMKTNPGHYVSLI+     + +++NQEQ
Sbjct: 1   MGNCQAVDAAVLVIQHPCGKIDRLYWPVTASEVMKTNPGHYVSLIM-PLPPQPQEQNQEQ 59

Query: 61  KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKPQTEKKS 120
           K+VRFT VKLLRPNETLNLG AYRLI  QEVM                E +   + EK+ 
Sbjct: 60  KTVRFTRVKLLRPNETLNLGHAYRLITNQEVMKVLKAKKHAKSMKTEGEAV---KVEKEG 116

Query: 121 SGCESQTAGDSVSGNTNTNQGMRAERQRQR--GSANPAVV-RSKSWRPSLQSISE 172
           SGCE++   +S  G   T QG RAER +QR  GS NPA V RSKSWRPSLQSISE
Sbjct: 117 SGCETKKGEESDQG--KTYQGGRAERNKQRSGGSTNPAAVQRSKSWRPSLQSISE 169


>Medtr8g063200.1 | DUF4228 domain protein | HC |
           chr8:26461240-26460444 | 20130731
          Length = 173

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/178 (55%), Positives = 117/178 (65%), Gaps = 10/178 (5%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQE---QRN 57
           MGNCQ +DAA LVIQHP GKIER+YW ++AS VM+ NPG+YVSLI+PLP  EQE     N
Sbjct: 1   MGNCQTIDAAALVIQHPSGKIERLYWSVSASYVMRANPGYYVSLIMPLP-QEQEGENSNN 59

Query: 58  QEQKSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETIEKPQTE 117
           + +K V FT VKLL+P++TL LG AYRLI TQEV                 E +E    E
Sbjct: 60  EVKKPVLFTRVKLLKPDDTLTLGHAYRLITTQEV-EKVMKAKKRKARGKTVEDVEMMHLE 118

Query: 118 KKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR-GSANPAVVRSKSWRPSLQSISEFT 174
           K++S CES+   D+        Q MRA+RQR R  S NPAV R KSWRPSLQSISEF+
Sbjct: 119 KENSACESEGMLDT----GRMYQAMRADRQRLRVVSVNPAVPRPKSWRPSLQSISEFS 172


>Medtr3g078300.1 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 102/188 (54%), Gaps = 18/188 (9%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV---------T 51
           MGNCQA+DAA LVIQHP GK E+ Y  ++AS+VMK NPGH V+L+I   V         +
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 52  EQEQRNQEQKSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXETI 111
           +    + +   VR T +KLL+PN+TL LG  YRLI TQEVM                   
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMKGIREKKQAKIKQNMS--- 117

Query: 112 EKPQTEKKSSGCESQTAGDSVSGNTNTNQGMRAERQRQR-GSANPAVV---RSKSWRPSL 167
            KP   K + G E +        +T  N+  + ER + R  S N AV+   +++ W+PSL
Sbjct: 118 HKPDLVKTTLGLEMEKKAKRF--DTKDNKATKPERSQGRTTSTNNAVIVTAKTRFWQPSL 175

Query: 168 QSISEFTS 175
           QSISE  S
Sbjct: 176 QSISEIAS 183


>Medtr4g106790.1 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 187

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 103/192 (53%), Gaps = 22/192 (11%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
           MGNCQA+D A LVIQ P GK ER+YWP+TASEVMKT+P HYV+L+I   + T +++ N  
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 60  QK-----------SVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXX 108
            K            VR T +KLL+P +TL LG  YRLI  QEV                 
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSL 120

Query: 109 ETIEKPQTEKKSSGCESQTAGDSVSGNT-NTNQGMRAERQRQRGSANP----AVVRSKSW 163
                P++ +KS+  + +    + + +    N+  ++ER   R  A         +S++W
Sbjct: 121 -----PESAQKSNQIKERINDKTANRSEPKDNKETKSERHESRTKATTNGGNHNNKSRTW 175

Query: 164 RPSLQSISEFTS 175
           +PSLQSI+E  S
Sbjct: 176 QPSLQSITESAS 187


>Medtr4g106790.2 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 167

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 12/103 (11%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV-TEQEQRNQE 59
           MGNCQA+D A LVIQ P GK ER+YWP+TASEVMKT+P HYV+L+I   + T +++ N  
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 60  QK-----------SVRFTGVKLLRPNETLNLGPAYRLIPTQEV 91
            K            VR T +KLL+P +TL LG  YRLI  QEV
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEV 103


>Medtr3g078300.2 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 9/101 (8%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPV---------T 51
           MGNCQA+DAA LVIQHP GK E+ Y  ++AS+VMK NPGH V+L+I   V         +
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 52  EQEQRNQEQKSVRFTGVKLLRPNETLNLGPAYRLIPTQEVM 92
           +    + +   VR T +KLL+PN+TL LG  YRLI TQEVM
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVM 101


>Medtr4g097220.1 | DUF4228 domain protein | HC |
           chr4:40063713-40060326 | 20130731
          Length = 168

 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 25/182 (13%)

Query: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
           MGNCQA + A +VI  PG K+ER+YW ++A EVM +NPGHYV+L++  P  + E      
Sbjct: 1   MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSSPTLKSEN----- 55

Query: 61  KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVMXXXXXXXXXXXXXXXXET----IEKPQT 116
             +    +KLLRP++TL +G  YRLI  ++V+                E+    I+    
Sbjct: 56  -GMPLKHLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCGKLGKLLKESGNRGIQMKHR 114

Query: 117 EKKSSG-----CESQTAGDSVSGNTNTNQGMRAERQRQRGSANPAVVRSKSWRPSLQSIS 171
           + ++        E +T     +G+ +TN          R      V  S  WRP+LQSI+
Sbjct: 115 DFRAPNPSPVKVERETQRTESNGSRSTN----------RSVGRHIVGGSGQWRPALQSIA 164

Query: 172 EF 173
           EF
Sbjct: 165 EF 166


>Medtr4g097220.2 | DUF4228 domain protein | HC |
          chr4:40063713-40062352 | 20130731
          Length = 139

 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 6/92 (6%)

Query: 1  MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60
          MGNCQA + A +VI  PG K+ER+YW ++A EVM +NPGHYV+L++  P  + E      
Sbjct: 1  MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSSPTLKSEN----- 55

Query: 61 KSVRFTGVKLLRPNETLNLGPAYRLIPTQEVM 92
            +    +KLLRP++TL +G  YRLI  ++V+
Sbjct: 56 -GMPLKHLKLLRPDDTLLIGQVYRLISFEDVL 86