Miyakogusa Predicted Gene
- Lj2g3v1371320.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1371320.2 tr|C1ML73|C1ML73_MICPC Leucine rich
repeat-containing protein OS=Micromonas pusilla (strain
CCMP1545,31.17,1e-18,FAMILY NOT NAMED,NULL; Leucine rich repeat,
ribonuclease inhibitor,Leucine-rich repeat, ribonuclease,CUFF.37150.2
(380 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g035590.1 | LRR ribonuclease inhibitor domain protein | HC... 652 0.0
Medtr5g035590.2 | LRR ribonuclease inhibitor domain protein | HC... 647 0.0
Medtr1g105040.1 | RAN GTPase activating protein | HC | chr1:4733... 94 2e-19
Medtr1g072250.1 | RAN GTPase activating protein | HC | chr1:3205... 84 2e-16
Medtr1g072250.2 | RAN GTPase activating protein | HC | chr1:3205... 84 2e-16
>Medtr5g035590.1 | LRR ribonuclease inhibitor domain protein | HC |
chr5:15490899-15482144 | 20130731
Length = 606
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/380 (84%), Positives = 347/380 (91%)
Query: 1 MTLKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLR 60
+TLK LDLSGNPVGDEGAK LCDIL+ NS+IEKL+LNSADLGDEGAKAIAEMLKKNSSLR
Sbjct: 227 ITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLR 286
Query: 61 VLELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHL 120
VLELNNNMIEYSGF+SLAGAL+EN+SIRNIH KS+RELHL
Sbjct: 287 VLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHL 346
Query: 121 HGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMN 180
HGNSIGDEGIRSLMTGL+S+KGKLTLLDIGNNS+TA GAF+VAGYI+K KSLLWLN+YMN
Sbjct: 347 HGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMN 406
Query: 181 DIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGP 240
DIGD+GAEK+ADALK+NRSITTLD+GGNNIHA GV +A+VLKDNSVI+TLELSYNPIGP
Sbjct: 407 DIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGP 466
Query: 241 DGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGAL 300
DGAKALAEVIKFHG+VKTLKLGWCQIGAKGAEFIADALKYNTTIS+LDLRANGLRDEGAL
Sbjct: 467 DGAKALAEVIKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGAL 526
Query: 301 CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSA 360
CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSN+D+AVTSLNI SNFLTKFGQSA
Sbjct: 527 CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSA 586
Query: 361 LSDARDHVLEMTEKEINIFL 380
LSDARDHV EMTEKEI IF
Sbjct: 587 LSDARDHVFEMTEKEIAIFF 606
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 120/252 (47%), Gaps = 3/252 (1%)
Query: 113 KSLRELHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSL 172
+S + G + GDEG+ L L+ + + N ITA G G ++ + +L
Sbjct: 171 RSFSYTDMSGRNFGDEGLFFLAESLA-FNQNAEEVSFAANGITAAGMKAFDGVLQSNITL 229
Query: 173 LWLNLYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLE 232
L+L N +GD+GA+ + D L N +I L L ++ G IA +LK NS + LE
Sbjct: 230 KTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLE 289
Query: 233 LSYNPIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRAN 292
L+ N I G +LA + + S++ + L GA G +A AL+ N +I L L N
Sbjct: 290 LNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGN 349
Query: 293 GLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNF 352
+ DEG L L LT LD+G N + GAF +A +K ++ LNI N
Sbjct: 350 SIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIK--SLLWLNIYMND 407
Query: 353 LTKFGQSALSDA 364
+ G L+DA
Sbjct: 408 IGDEGAEKLADA 419
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 101/177 (57%), Gaps = 1/177 (0%)
Query: 165 YIRKSKSLLWLNLYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKD 224
+ R+ +S + ++ + GD+G +A++L N++ + N I AAG+ VL+
Sbjct: 166 FARELRSFSYTDMSGRNFGDEGLFFLAESLAFNQNAEEVSFAANGITAAGMKAFDGVLQS 225
Query: 225 NSVISTLELSYNPIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTI 284
N + TL+LS NP+G +GAK L +++ + +++ L+L +G +GA+ IA+ LK N+++
Sbjct: 226 NITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSL 285
Query: 285 SILDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDI 341
+L+L N + G LA +L + N ++ ++ L N G A+A+AL+ N I
Sbjct: 286 RVLELNNNMIEYSGFTSLAGAL-LENNSIRNIHLNGNYGGALGVNALAKALEGNKSI 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 3/183 (1%)
Query: 182 IGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGPD 241
I + +K+ + ++ RS + D+ G N G+ +A L N + + N I
Sbjct: 155 IDSQSKQKLNEFARELRSFSYTDMSGRNFGDEGLFFLAESLAFNQNAEEVSFAANGITAA 214
Query: 242 GAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGALC 301
G KA V++ + ++KTL L +G +GA+ + D L N+TI L L + L DEGA
Sbjct: 215 GMKAFDGVLQSNITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKA 274
Query: 302 LARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSAL 361
+A LK N +L L+L N I G ++A AL N+ I +++++ N+ G +AL
Sbjct: 275 IAEMLK-KNSSLRVLELNNNMIEYSGFTSLAGALLENNSI--RNIHLNGNYGGALGVNAL 331
Query: 362 SDA 364
+ A
Sbjct: 332 AKA 334
>Medtr5g035590.2 | LRR ribonuclease inhibitor domain protein | HC |
chr5:15490899-15482144 | 20130731
Length = 429
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/380 (84%), Positives = 347/380 (91%)
Query: 1 MTLKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLR 60
+TLK LDLSGNPVGDEGAK LCDIL+ NS+IEKL+LNSADLGDEGAKAIAEMLKKNSSLR
Sbjct: 50 ITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLR 109
Query: 61 VLELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHL 120
VLELNNNMIEYSGF+SLAGAL+EN+SIRNIH KS+RELHL
Sbjct: 110 VLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHL 169
Query: 121 HGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMN 180
HGNSIGDEGIRSLMTGL+S+KGKLTLLDIGNNS+TA GAF+VAGYI+K KSLLWLN+YMN
Sbjct: 170 HGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMN 229
Query: 181 DIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGP 240
DIGD+GAEK+ADALK+NRSITTLD+GGNNIHA GV +A+VLKDNSVI+TLELSYNPIGP
Sbjct: 230 DIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGP 289
Query: 241 DGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGAL 300
DGAKALAEVIKFHG+VKTLKLGWCQIGAKGAEFIADALKYNTTIS+LDLRANGLRDEGAL
Sbjct: 290 DGAKALAEVIKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGAL 349
Query: 301 CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSA 360
CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSN+D+AVTSLNI SNFLTKFGQSA
Sbjct: 350 CLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSA 409
Query: 361 LSDARDHVLEMTEKEINIFL 380
LSDARDHV EMTEKEI IF
Sbjct: 410 LSDARDHVFEMTEKEIAIFF 429
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 120 LHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYM 179
+ G + GDEG+ L L+ + + N ITA G G ++ + +L L+L
Sbjct: 1 MSGRNFGDEGLFFLAESLA-FNQNAEEVSFAANGITAAGMKAFDGVLQSNITLKTLDLSG 59
Query: 180 NDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIG 239
N +GD+GA+ + D L N +I L L ++ G IA +LK NS + LEL+ N I
Sbjct: 60 NPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIE 119
Query: 240 PDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGA 299
G +LA + + S++ + L GA G +A AL+ N +I L L N + DEG
Sbjct: 120 YSGFTSLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGI 179
Query: 300 LCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQS 359
L L LT LD+G N + GAF +A +K ++ LNI N + G
Sbjct: 180 RSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIK--SLLWLNIYMNDIGDEGAE 237
Query: 360 ALSDA 364
L+DA
Sbjct: 238 KLADA 242
>Medtr1g105040.1 | RAN GTPase activating protein | HC |
chr1:47338466-47340067 | 20130731
Length = 533
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 28/244 (11%)
Query: 3 LKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRVL 62
LK+L N GDEGA+++ +++ +S +E R +S +GDEG A+++ L + LR L
Sbjct: 270 LKVLHFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKL 329
Query: 63 ELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLHG 122
+L +NM+ G SL+ AL +N+ LRE++L
Sbjct: 330 DLRDNMLGVEGGVSLSKALAKNAE----------------------------LREIYLSF 361
Query: 123 NSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMNDI 182
++ DEG ++ L + +L +L++ N+IT D A +A + + L LNL N++
Sbjct: 362 LNLEDEGAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENEL 421
Query: 183 GDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGPDG 242
D+GA +I+ AL+ + +DL N I G +A + L++ N I +G
Sbjct: 422 KDEGAIQISKALEGLSQLKEIDLSCNRITRDGAQQLALTVLQKVDFERLDIDGNFISDEG 481
Query: 243 AKAL 246
K L
Sbjct: 482 IKEL 485
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 30/298 (10%)
Query: 2 TLKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRV 61
LK L+LS N +G++G ++ +L + S +E+L L + + +E A+A++E++ L+V
Sbjct: 213 VLKYLNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKV 272
Query: 62 LELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLH 121
L +NNM G ++A +++ SS L +
Sbjct: 273 LHFHNNMTGDEGARAIA-EVVKRSSC---------------------------LEDFRCS 304
Query: 122 GNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMND 181
IGDEG +L L L LD+ +N + +G ++ + K+ L + L +
Sbjct: 305 STRIGDEGGVALSDALGDCT-HLRKLDLRDNMLGVEGGVSLSKALAKNAELREIYLSFLN 363
Query: 182 IGDKGAEKIADALKDNRS-ITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGP 240
+ D+GA IA+ALK + + L++ GNNI IA L ++ L LS N +
Sbjct: 364 LEDEGAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENELKD 423
Query: 241 DGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEG 298
+GA +++ ++ +K + L +I GA+ +A + LD+ N + DEG
Sbjct: 424 EGAIQISKALEGLSQLKEIDLSCNRITRDGAQQLALTVLQKVDFERLDIDGNFISDEG 481
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 172 LLWLNLYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTL 231
L +LNL N +G+KG LK + L L + I ++ ++ + L
Sbjct: 214 LKYLNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKVL 273
Query: 232 ELSYNPIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRA 291
N G +GA+A+AEV+K ++ + +IG +G ++DAL T + LDLR
Sbjct: 274 HFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRD 333
Query: 292 N----------------------------GLRDEGALCLARSLKVVNEALTSLDLGFNEI 323
N L DEGA+ +A +LK L L++ N I
Sbjct: 334 NMLGVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNI 393
Query: 324 RDDGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSALSDARDHVLEMTE 373
D A AIA L + +A LN+S N L G +S A + + ++ E
Sbjct: 394 TVDAAPAIANCLAAKQFLA--KLNLSENELKDEGAIQISKALEGLSQLKE 441
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 68/362 (18%)
Query: 3 LKILDLSGNPVGDEGAKSLCDIL------VNNSSIEKLRLNSADLGDEGAKAIAEMLKKN 56
LK +DLS G A++L D++ + S ++ L L+ LG++G +A +LK
Sbjct: 181 LKEVDLSDFIAGRPEAEAL-DVMRIFSATLEGSVLKYLNLSDNALGEKGVRAFGTLLKSQ 239
Query: 57 SSLRVLELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLR 116
S L L L N+ I +++ LI ++ + L+
Sbjct: 240 SCLEELYLMNDGISEEAAQAVS-ELIPST---------------------------EKLK 271
Query: 117 ELHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLN 176
LH H N GDEG R++ + L + I +G ++ + L L+
Sbjct: 272 VLHFHNNMTGDEGARAIAE-VVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLD 330
Query: 177 LYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSV-ISTLELSY 235
L N +G +G ++ AL N + + L N+ G IA LK ++ + LE+S
Sbjct: 331 LRDNMLGVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSG 390
Query: 236 NPIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLR 295
N I D A A IA+ L ++ L+L N L+
Sbjct: 391 NNITVDAAPA----------------------------IANCLAAKQFLAKLNLSENELK 422
Query: 296 DEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDIAVTSLNISSNFLTK 355
DEGA+ ++++L+ +++ L +DL N I DGA +A + D L+I NF++
Sbjct: 423 DEGAIQISKALEGLSQ-LKEIDLSCNRITRDGAQQLALTVLQKVDF--ERLDIDGNFISD 479
Query: 356 FG 357
G
Sbjct: 480 EG 481
>Medtr1g072250.1 | RAN GTPase activating protein | HC |
chr1:32059969-32062806 | 20130731
Length = 533
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 2 TLKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRV 61
L+ L+LS N +G++G ++ +L + + +E+L L + + +E AKA+AE++ L+V
Sbjct: 215 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274
Query: 62 LELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLH 121
L +NNM G ++A + +L +
Sbjct: 275 LHFHNNMTGDEGAFAIADVM----------------------------KRSPALEDFRCS 306
Query: 122 GNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMND 181
+G EG +L L + L LD+ +N + ++ I L + L +
Sbjct: 307 STRVGAEGGVALAEALGACT-HLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLN 365
Query: 182 IGDKGAEKIADALKDN-RSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGP 240
+ D GAE +A+ALK++ S+ LD+ GN+I A +A + ++ L LS N +
Sbjct: 366 LEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKD 425
Query: 241 DGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEG 298
+GA +++ ++ G + + L I GA+ +A+A+ +L++ AN + DEG
Sbjct: 426 EGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEG 483
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 28/249 (11%)
Query: 3 LKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRVL 62
LK+L N GDEGA ++ D++ + ++E R +S +G EG A+AE L + L+ L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331
Query: 63 ELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLHG 122
+L +NM F AG + S + + L E++L
Sbjct: 332 DLRDNM-----FGVEAGVAL--SKVIPVFA---------------------DLTEIYLSY 363
Query: 123 NSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMNDI 182
++ D+G +L L L +LD+ N ITA A VA I + L LNL N++
Sbjct: 364 LNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENEL 423
Query: 183 GDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGPDG 242
D+GA I+ AL+ ++ +DL N I +G ++A + L ++ N I +G
Sbjct: 424 KDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEG 483
Query: 243 AKALAEVIK 251
L ++ K
Sbjct: 484 IDELKDIFK 492
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 61/279 (21%)
Query: 115 LRELHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLW 174
LR L+L N++G++G+R+ L S + L L + N+ I+ + A VA I ++ L
Sbjct: 216 LRHLNLSNNAMGEKGVRAFRALLKS-QNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274
Query: 175 LNLYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELS 234
L+ + N GD+GA IAD V+K + + S
Sbjct: 275 LHFHNNMTGDEGAFAIAD----------------------------VMKRSPALEDFRCS 306
Query: 235 YNPIGPDGAKALAE----------------------------VIKFHGSVKTLKLGWCQI 266
+G +G ALAE VI + + L + +
Sbjct: 307 STRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNL 366
Query: 267 GAKGAEFIADALKYN-TTISILDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRD 325
GAE +A+ALK + ++ ILD+ N + + A+ +A + + LT L+L NE++D
Sbjct: 367 EDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECIS-SKQFLTKLNLSENELKD 425
Query: 326 DGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSALSDA 364
+GA I++AL+ + + +++S+N +T G L++A
Sbjct: 426 EGAGLISKALEGLGQL--SEVDLSTNLITWSGAKLLAEA 462
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 36/345 (10%)
Query: 3 LKILDLSGNPVGDEGAKSLCDILVNNSSIE-----KLRLNSADLGDEGAKAIAEMLKKNS 57
LK +DLS G A+++ + + +S++E L L++ +G++G +A +LK +
Sbjct: 183 LKEVDLSDFIAGRPEAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQN 242
Query: 58 SLRVLELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRE 117
L L L N+ I ++A + ++ +H +L +
Sbjct: 243 DLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALED 302
Query: 118 LHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNL 177
+G EG +L L + L LD+ +N + ++ I L + L
Sbjct: 303 FRCSSTRVGAEGGVALAEALGACT-HLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYL 361
Query: 178 YMNDIGDKGAEKIADALKDN-RSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYN 236
++ D GAE +A+ALK++ S+ LD+ GN+I A +A + ++ L LS N
Sbjct: 362 SYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSEN 421
Query: 237 PIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRD 296
++ +GA I+ AL+ +S +DL N +
Sbjct: 422 ----------------------------ELKDEGAGLISKALEGLGQLSEVDLSTNLITW 453
Query: 297 EGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDI 341
GA LA ++ V L++ N I D+G + K++ DI
Sbjct: 454 SGAKLLAEAV-VQKPGFKLLNVNANFISDEGIDELKDIFKNSPDI 497
>Medtr1g072250.2 | RAN GTPase activating protein | HC |
chr1:32059858-32062923 | 20130731
Length = 533
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 2 TLKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRV 61
L+ L+LS N +G++G ++ +L + + +E+L L + + +E AKA+AE++ L+V
Sbjct: 215 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274
Query: 62 LELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLH 121
L +NNM G ++A + +L +
Sbjct: 275 LHFHNNMTGDEGAFAIADVM----------------------------KRSPALEDFRCS 306
Query: 122 GNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMND 181
+G EG +L L + L LD+ +N + ++ I L + L +
Sbjct: 307 STRVGAEGGVALAEALGACT-HLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLN 365
Query: 182 IGDKGAEKIADALKDN-RSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGP 240
+ D GAE +A+ALK++ S+ LD+ GN+I A +A + ++ L LS N +
Sbjct: 366 LEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKD 425
Query: 241 DGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEG 298
+GA +++ ++ G + + L I GA+ +A+A+ +L++ AN + DEG
Sbjct: 426 EGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEG 483
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 28/249 (11%)
Query: 3 LKILDLSGNPVGDEGAKSLCDILVNNSSIEKLRLNSADLGDEGAKAIAEMLKKNSSLRVL 62
LK+L N GDEGA ++ D++ + ++E R +S +G EG A+AE L + L+ L
Sbjct: 272 LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKL 331
Query: 63 ELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRELHLHG 122
+L +NM F AG + S + + L E++L
Sbjct: 332 DLRDNM-----FGVEAGVAL--SKVIPVFA---------------------DLTEIYLSY 363
Query: 123 NSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNLYMNDI 182
++ D+G +L L L +LD+ N ITA A VA I + L LNL N++
Sbjct: 364 LNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENEL 423
Query: 183 GDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYNPIGPDG 242
D+GA I+ AL+ ++ +DL N I +G ++A + L ++ N I +G
Sbjct: 424 KDEGAGLISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEG 483
Query: 243 AKALAEVIK 251
L ++ K
Sbjct: 484 IDELKDIFK 492
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 61/279 (21%)
Query: 115 LRELHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLW 174
LR L+L N++G++G+R+ L S + L L + N+ I+ + A VA I ++ L
Sbjct: 216 LRHLNLSNNAMGEKGVRAFRALLKS-QNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274
Query: 175 LNLYMNDIGDKGAEKIADALKDNRSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELS 234
L+ + N GD+GA IAD V+K + + S
Sbjct: 275 LHFHNNMTGDEGAFAIAD----------------------------VMKRSPALEDFRCS 306
Query: 235 YNPIGPDGAKALAE----------------------------VIKFHGSVKTLKLGWCQI 266
+G +G ALAE VI + + L + +
Sbjct: 307 STRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNL 366
Query: 267 GAKGAEFIADALKYN-TTISILDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRD 325
GAE +A+ALK + ++ ILD+ N + + A+ +A + + LT L+L NE++D
Sbjct: 367 EDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECIS-SKQFLTKLNLSENELKD 425
Query: 326 DGAFAIAQALKSNDDIAVTSLNISSNFLTKFGQSALSDA 364
+GA I++AL+ + + +++S+N +T G L++A
Sbjct: 426 EGAGLISKALEGLGQL--SEVDLSTNLITWSGAKLLAEA 462
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 36/345 (10%)
Query: 3 LKILDLSGNPVGDEGAKSLCDILVNNSSIE-----KLRLNSADLGDEGAKAIAEMLKKNS 57
LK +DLS G A+++ + + +S++E L L++ +G++G +A +LK +
Sbjct: 183 LKEVDLSDFIAGRPEAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQN 242
Query: 58 SLRVLELNNNMIEYSGFSSLAGALIENSSIRNIHXXXXXXXXXXXXXXXXXXXXXKSLRE 117
L L L N+ I ++A + ++ +H +L +
Sbjct: 243 DLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALED 302
Query: 118 LHLHGNSIGDEGIRSLMTGLSSYKGKLTLLDIGNNSITADGAFHVAGYIRKSKSLLWLNL 177
+G EG +L L + L LD+ +N + ++ I L + L
Sbjct: 303 FRCSSTRVGAEGGVALAEALGACT-HLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYL 361
Query: 178 YMNDIGDKGAEKIADALKDN-RSITTLDLGGNNIHAAGVSVIARVLKDNSVISTLELSYN 236
++ D GAE +A+ALK++ S+ LD+ GN+I A +A + ++ L LS N
Sbjct: 362 SYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSEN 421
Query: 237 PIGPDGAKALAEVIKFHGSVKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRD 296
++ +GA I+ AL+ +S +DL N +
Sbjct: 422 ----------------------------ELKDEGAGLISKALEGLGQLSEVDLSTNLITW 453
Query: 297 EGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDI 341
GA LA ++ V L++ N I D+G + K++ DI
Sbjct: 454 SGAKLLAEAV-VQKPGFKLLNVNANFISDEGIDELKDIFKNSPDI 497