Miyakogusa Predicted Gene

Lj2g3v1349460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1349460.1 tr|G7K8A8|G7K8A8_MEDTR Tetratricopeptide repeat
protein OS=Medicago truncatula GN=MTR_5g037400 PE=4 ,78.54,0,no
description,Tetratricopeptide-like helical; TPR-like,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FA,CUFF.36827.1
         (473 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g037400.1 | TPR-like protein | HC | chr5:16375919-16382128...   746   0.0  
Medtr5g037400.3 | TPR-like protein | HC | chr5:16375919-16382128...   669   0.0  
Medtr5g037400.2 | TPR-like protein | HC | chr5:16375919-16382128...   626   e-179
Medtr5g037420.1 | TPR-like protein | HC | chr5:16389500-16388722...   241   8e-64

>Medtr5g037400.1 | TPR-like protein | HC | chr5:16375919-16382128 |
           20130731
          Length = 468

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/466 (75%), Positives = 399/466 (85%)

Query: 8   GTVKLDSCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHF 67
           G +KL+ CGY++ TSSQ C+S INSYY QVL YGR+RSVI+EAV HD  CVLANTLAAHF
Sbjct: 3   GRIKLNGCGYDVTTSSQLCISIINSYYQQVLSYGRERSVIMEAVVHDNYCVLANTLAAHF 62

Query: 68  VYPPASSRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPR 127
           +    SSRA   L  A S LEHATLYEKLVFD ISYL+SEDRDDDVA++LHSKLL+EFPR
Sbjct: 63  INSSDSSRAASLLHTAKSHLEHATLYEKLVFDVISYLMSEDRDDDVAVELHSKLLKEFPR 122

Query: 128 DLVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQ 187
           DLVSLKRAQ+LCF MGRPDLSLSLV+QVLPQNEG+N+IYGMLAFPLLELGQMK+AE+AA+
Sbjct: 123 DLVSLKRAQILCFNMGRPDLSLSLVNQVLPQNEGENFIYGMLAFPLLELGQMKEAEEAAK 182

Query: 188 RGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYL 247
           RGFEIN QD WS H  CHVLQYECRF+EA++FMEEC         FMLTHNWWHVALCYL
Sbjct: 183 RGFEINNQDGWSQHATCHVLQYECRFREAVEFMEECSPSWNSFLSFMLTHNWWHVALCYL 242

Query: 248 EGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDELDMLGDRLKILAE 307
           EGNAP+QRVLE+YDNYIWKELDKTD   AEVYLNAVALLLRLCVRDEL+  GDRLK+LA+
Sbjct: 243 EGNAPMQRVLEVYDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLAD 302

Query: 308 CLTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXA 367
            L DQANWY+EWHLD+LTVWALAKTG+I KAE+LLKGL++R+SRMT             A
Sbjct: 303 RLADQANWYLEWHLDILTVWALAKTGQISKAEELLKGLKERISRMTKKKQQIMQKGMVLA 362

Query: 368 EALYAYGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEV 427
           EALYAYGRGN+KHGVELLGPDFDANDYKIIGASDEQVDVFN+VWY MLLN+G+A  AIEV
Sbjct: 363 EALYAYGRGNNKHGVELLGPDFDANDYKIIGASDEQVDVFNEVWYIMLLNNGDAIKAIEV 422

Query: 428 IEKRIKKREGIPYTWRLLERGYKLANRPEAGIASKQAKALESAYFD 473
           IEK+IKKR+G  + WRLLERGYKLANRPEA IA+++AK  ESAYF+
Sbjct: 423 IEKQIKKRDGTAFLWRLLERGYKLANRPEAAIANEKAKVFESAYFN 468


>Medtr5g037400.3 | TPR-like protein | HC | chr5:16375919-16382128 |
           20130731
          Length = 435

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/466 (69%), Positives = 367/466 (78%), Gaps = 33/466 (7%)

Query: 8   GTVKLDSCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHF 67
           G +KL+ CGY++ TSSQ C+S INSYY QVL YGR+RSVI+EAV HD  CVLANTLAAHF
Sbjct: 3   GRIKLNGCGYDVTTSSQLCISIINSYYQQVLSYGRERSVIMEAVVHDNYCVLANTLAAHF 62

Query: 68  VYPPASSRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPR 127
           +    SSRA   L  A S L                                 LL+EFPR
Sbjct: 63  INSSDSSRAASLLHTAKSHL---------------------------------LLKEFPR 89

Query: 128 DLVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQ 187
           DLVSLKRAQ+LCF MGRPDLSLSLV+QVLPQNEG+N+IYGMLAFPLLELGQMK+AE+AA+
Sbjct: 90  DLVSLKRAQILCFNMGRPDLSLSLVNQVLPQNEGENFIYGMLAFPLLELGQMKEAEEAAK 149

Query: 188 RGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYL 247
           RGFEIN QD WS H  CHVLQYECRF+EA++FMEEC         FMLTHNWWHVALCYL
Sbjct: 150 RGFEINNQDGWSQHATCHVLQYECRFREAVEFMEECSPSWNSFLSFMLTHNWWHVALCYL 209

Query: 248 EGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDELDMLGDRLKILAE 307
           EGNAP+QRVLE+YDNYIWKELDKTD   AEVYLNAVALLLRLCVRDEL+  GDRLK+LA+
Sbjct: 210 EGNAPMQRVLEVYDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLAD 269

Query: 308 CLTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXA 367
            L DQANWY+EWHLD+LTVWALAKTG+I KAE+LLKGL++R+SRMT             A
Sbjct: 270 RLADQANWYLEWHLDILTVWALAKTGQISKAEELLKGLKERISRMTKKKQQIMQKGMVLA 329

Query: 368 EALYAYGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEV 427
           EALYAYGRGN+KHGVELLGPDFDANDYKIIGASDEQVDVFN+VWY MLLN+G+A  AIEV
Sbjct: 330 EALYAYGRGNNKHGVELLGPDFDANDYKIIGASDEQVDVFNEVWYIMLLNNGDAIKAIEV 389

Query: 428 IEKRIKKREGIPYTWRLLERGYKLANRPEAGIASKQAKALESAYFD 473
           IEK+IKKR+G  + WRLLERGYKLANRPEA IA+++AK  ESAYF+
Sbjct: 390 IEKQIKKRDGTAFLWRLLERGYKLANRPEAAIANEKAKVFESAYFN 435


>Medtr5g037400.2 | TPR-like protein | HC | chr5:16375919-16382128 |
           20130731
          Length = 424

 Score =  626 bits (1614), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 295/389 (75%), Positives = 331/389 (85%)

Query: 8   GTVKLDSCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHF 67
           G +KL+ CGY++ TSSQ C+S INSYY QVL YGR+RSVI+EAV HD  CVLANTLAAHF
Sbjct: 3   GRIKLNGCGYDVTTSSQLCISIINSYYQQVLSYGRERSVIMEAVVHDNYCVLANTLAAHF 62

Query: 68  VYPPASSRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPR 127
           +    SSRA   L  A S LEHATLYEKLVFD ISYL+SEDRDDDVA++LHSKLL+EFPR
Sbjct: 63  INSSDSSRAASLLHTAKSHLEHATLYEKLVFDVISYLMSEDRDDDVAVELHSKLLKEFPR 122

Query: 128 DLVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQ 187
           DLVSLKRAQ+LCF MGRPDLSLSLV+QVLPQNEG+N+IYGMLAFPLLELGQMK+AE+AA+
Sbjct: 123 DLVSLKRAQILCFNMGRPDLSLSLVNQVLPQNEGENFIYGMLAFPLLELGQMKEAEEAAK 182

Query: 188 RGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXXXXXXXFMLTHNWWHVALCYL 247
           RGFEIN QD WS H  CHVLQYECRF+EA++FMEEC         FMLTHNWWHVALCYL
Sbjct: 183 RGFEINNQDGWSQHATCHVLQYECRFREAVEFMEECSPSWNSFLSFMLTHNWWHVALCYL 242

Query: 248 EGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDELDMLGDRLKILAE 307
           EGNAP+QRVLE+YDNYIWKELDKTD   AEVYLNAVALLLRLCVRDEL+  GDRLK+LA+
Sbjct: 243 EGNAPMQRVLEVYDNYIWKELDKTDATVAEVYLNAVALLLRLCVRDELEFFGDRLKMLAD 302

Query: 308 CLTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTXXXXXXXXXXXXXA 367
            L DQANWY+EWHLD+LTVWALAKTG+I KAE+LLKGL++R+SRMT             A
Sbjct: 303 RLADQANWYLEWHLDILTVWALAKTGQISKAEELLKGLKERISRMTKKKQQIMQKGMVLA 362

Query: 368 EALYAYGRGNDKHGVELLGPDFDANDYKI 396
           EALYAYGRGN+KHGVELLGPDFDANDYK+
Sbjct: 363 EALYAYGRGNNKHGVELLGPDFDANDYKV 391


>Medtr5g037420.1 | TPR-like protein | HC | chr5:16389500-16388722 |
           20130731
          Length = 151

 Score =  241 bits (616), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/148 (75%), Positives = 125/148 (84%)

Query: 168 MLAFPLLELGQMKDAEKAAQRGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECXXXX 227
           MLAFPLLELGQMK+AE+AA+RGFEIN QD WS H  CHVLQYECRF+EA++FMEEC    
Sbjct: 1   MLAFPLLELGQMKEAEEAAKRGFEINNQDGWSQHATCHVLQYECRFREAVEFMEECSPSW 60

Query: 228 XXXXXFMLTHNWWHVALCYLEGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLL 287
                FMLTHNWWHVALCYLEGNAP+QRVLE+YDNYIWKELDKTD    EVYLNAVALLL
Sbjct: 61  NSFLSFMLTHNWWHVALCYLEGNAPMQRVLEVYDNYIWKELDKTDATVPEVYLNAVALLL 120

Query: 288 RLCVRDELDMLGDRLKILAECLTDQANW 315
           RLCVRDEL+  GDRLK+LA+ L DQ ++
Sbjct: 121 RLCVRDELEFFGDRLKMLADRLADQVSY 148