Miyakogusa Predicted Gene

Lj2g3v1349140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1349140.1 Non Characterized Hit- tr|B7FK52|B7FK52_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,67.9,8e-19,seg,NULL,CUFF.36796.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g038280.1 | homeobox leucine zipper family protein | HC | ...   191   2e-49
Medtr8g469430.1 | homeobox leucine zipper family protein | HC | ...    71   3e-13
Medtr4g107650.1 | homeobox leucine zipper family protein | HC | ...    69   2e-12

>Medtr5g038280.1 | homeobox leucine zipper family protein | HC |
           chr5:16764339-16761810 | 20130731
          Length = 324

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 114/159 (71%), Gaps = 15/159 (9%)

Query: 1   MIEQVNSLKNKLIPRDKEKENSDDKSSPDAA-------EPMDLISNANSENGSKVPLPNM 53
           + E+VNSLKNKLIPRDKEK NS+DKSSP+A        +PMD+IS  NSENGSK+ LPNM
Sbjct: 172 LKEEVNSLKNKLIPRDKEKVNSEDKSSPEAINSPHNNIDPMDIISITNSENGSKMSLPNM 231

Query: 54  VTCCKQEDANSAKSDVLDSDSPHCTDGNHFMEPADSSHAFEPDHSDFSQXXX--XXXXXX 111
           V  CKQEDANSAKSDVLDSDSPHC DGN+       S   EP  SDFSQ           
Sbjct: 232 VLKCKQEDANSAKSDVLDSDSPHCNDGNNL------SSFIEPTDSDFSQDEEDNDNLSHN 285

Query: 112 XXXXPCLPKVEDVCYDDLPDNSCNFGFPVEDQTFCFWPY 150
               PCLPKVEDVCYDD  +NSCNFGFPVEDQTFCFWPY
Sbjct: 286 LLTLPCLPKVEDVCYDDPHENSCNFGFPVEDQTFCFWPY 324


>Medtr8g469430.1 | homeobox leucine zipper family protein | HC |
           chr8:25235979-25238269 | 20130731
          Length = 286

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 39/149 (26%)

Query: 3   EQVNSLKNKLIPRDKEKENSDDKSSPDAAEPMDLISNANSENGSKVPLPNMVTCCKQEDA 62
           E+V SLK +L+PR+K++ N   KS  D      +IS                        
Sbjct: 176 EEVISLKKRLVPREKQENNLVAKSLDD------IISQH---------------------- 207

Query: 63  NSAKSDVLDSDSPHCTDGNHFMEPADSSHAFEPDHSDFSQXXXXXXXXXXXXXPCLPKVE 122
              K+DV+DS+    TDGN        S   EP+ S+FSQ             P +PKV 
Sbjct: 208 ---KTDVVDSECLQNTDGNQ-------SLVVEPNQSEFSQDEEDILSQNILNVPFIPKVA 257

Query: 123 DV-CYDDLPDNSCNFGFPVEDQTFCFWPY 150
           D+ CYD+  ++ C+F FP EDQTF FW Y
Sbjct: 258 DIGCYDEPHESCCSFQFPFEDQTFYFWSY 286


>Medtr4g107650.1 | homeobox leucine zipper family protein | HC |
           chr4:44594969-44592337 | 20130731
          Length = 337

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 30/165 (18%)

Query: 4   QVNSLKNKLIPRDK--------EKENSDDKSSPDAAEPMDLISNANSENGSKVPL----P 51
           +V SL  K++ R+K        E E  +    P   +P  L+ + +   GSK+ +     
Sbjct: 183 EVASLTEKVLEREKQEGKFKQGESETKEFLKEPTINKP--LVDSVSEGEGSKLSIVEASN 240

Query: 52  NMVTCCKQEDANSAKSDVLDSDSPHCTDGNHFMEPADSSHAFEPDH-SDFSQXXXXXXXX 110
           N     K ED +SA+SD+LD +SP  TDG   +E  DSS+ FEP++ SD SQ        
Sbjct: 241 NNNNNNKLEDISSARSDILDCESPRYTDG--VLETCDSSYVFEPEYQSDLSQDEEDHN-- 296

Query: 111 XXXXXPCLP-----KVEDVCYDDLPDNSCNFGFPVEDQTFCFWPY 150
                  LP     K+EDV Y D P NS ++GF  ED     WP+
Sbjct: 297 ------LLPPYIFTKLEDVNYSDPPHNSTSYGFQEEDHHQALWPW 335