Miyakogusa Predicted Gene

Lj2g3v1337630.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1337630.2 Non Characterized Hit- tr|I1NAY0|I1NAY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52856
PE,78.26,0.0000000000004,Aa_trans,Amino acid transporter,
transmembrane,CUFF.36731.2
         (72 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g107090.1 | transmembrane amino acid transporter family pr...    86   8e-18
Medtr5g024300.1 | transmembrane amino acid transporter family pr...    47   3e-06

>Medtr7g107090.1 | transmembrane amino acid transporter family
           protein | HC | chr7:43665400-43668610 | 20130731
          Length = 407

 Score = 85.9 bits (211), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/46 (84%), Positives = 43/46 (93%)

Query: 13  LKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           L+   KD++KFPKLLAQTFSGITLVYILFGLCGYMAFGEET+DIVT
Sbjct: 222 LENSMKDKAKFPKLLAQTFSGITLVYILFGLCGYMAFGEETRDIVT 267


>Medtr5g024300.1 | transmembrane amino acid transporter family
           protein | HC | chr5:9783925-9781692 | 20130731
          Length = 422

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)

Query: 13  LKEQQKDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVT 58
           L+ + KD+ KF ++L      I++++  FG+ GY AFGEETKDI+T
Sbjct: 244 LESETKDKEKFGRVLGLGMGMISILFGAFGVLGYFAFGEETKDIIT 289