Miyakogusa Predicted Gene

Lj2g3v1337470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1337470.1 Non Characterized Hit- tr|I1KXV1|I1KXV1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,59.86,0,no
description,MIF4-like, type 1/2/3; ARM repeat,Armadillo-type fold;
seg,NULL; CELL CYCLE CONTROL P,gene.g41266.t1.1
         (293 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g434840.1 | pre-mRNA-splicing factor cwc22, putative | HC ...   296   2e-80
Medtr7g093510.1 | pre-mRNA-splicing factor CWC22-like protein | ...   261   6e-70
Medtr7g093340.1 | pre-mRNA-splicing factor CWC22-like protein | ...    64   2e-10

>Medtr3g434840.1 | pre-mRNA-splicing factor cwc22, putative | HC |
           chr3:11335847-11342445 | 20130731
          Length = 766

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 168/297 (56%), Positives = 214/297 (72%), Gaps = 12/297 (4%)

Query: 1   MAYQMASPASTDVFAALVAAVNTKFPEVTELLLKRIVWKFKIAYKWNVKPVLITNVKFVA 60
           M  QMASP  TDVFAA+VA VNTKFP+V +LLL+RIV + K AYK N KP L+  VKFVA
Sbjct: 273 MKSQMASPGFTDVFAAMVAVVNTKFPQVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFVA 332

Query: 61  HLLNQKVVDEIIALEMLDVLLKKPTDDSVQVAVYFVMVCGSALRKRSPKALRGVFKRLKE 120
           HL+NQ+V  EIIALE+L VLL+KP+DDSV+VAV FV   GS L+  SP+ L G+F+R + 
Sbjct: 333 HLVNQQVAHEIIALELLTVLLEKPSDDSVEVAVGFVTEVGSMLQDLSPRGLHGIFERFRG 392

Query: 121 ILHEGEVDKSVKFWIELLFSIRKTKFQGYPAIRPELDLVKNPEEISYFHQVSLDKPMDPE 180
           ILHEGE+DK V+F IE LF+IRK KFQGYPA+RPELDLV+  ++++  H+VSLD+ +DPE
Sbjct: 393 ILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLT--HEVSLDEEIDPE 450

Query: 181 FSRDTFKYDPNYLE---KYEEF------TDDEEGSDADVHSEVGENELDDESGEESMQIK 231
            S D FK DPNYLE   +YEE        ++E   +    +E  E++  DE  EE+MQIK
Sbjct: 451 TSLDIFKPDPNYLENEKRYEELKKTLLGEEEESEGEEGSDAESDEDDESDEEDEEAMQIK 510

Query: 232 DETESNRVNLQRTNYSTVMSSLGVKEAGHKLVKIHHLEPGEVXXXXXXXXXXCERQR 288
           DETE+N VNL+RT Y T+MSS+  +EAGHKL+KI HLEPG+           C ++R
Sbjct: 511 DETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKI-HLEPGQEMELCTMLLECCSQER 566


>Medtr7g093510.1 | pre-mRNA-splicing factor CWC22-like protein | HC
           | chr7:37183444-37184811 | 20130731
          Length = 455

 Score =  261 bits (667), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 143/275 (52%), Positives = 193/275 (70%), Gaps = 10/275 (3%)

Query: 5   MASPASTDVFAALVAAVNTKFPEVTELLLKRIVWKFKIAYKWNVKP-VLITNVKFVAHLL 63
           MA P  T  FAALVA VN+KFPEV  LLL+RIV +FK AY  N KP  L   VKF+AHL+
Sbjct: 1   MAYPEYTIEFAALVAVVNSKFPEVGNLLLRRIVLQFKWAYHRNDKPHQLHATVKFIAHLV 60

Query: 64  NQKVVDEIIALEMLDVLLKKPTDDSVQVAVYFVMVCGSALRKRSPKALRGVFKRLKEILH 123
            Q V  EIIALE+L VLL  P DDS++VAV F++ CGS L+  SPKAL  VF+R + IL+
Sbjct: 61  KQLVAHEIIALEILTVLLDNPIDDSLEVAVSFLIECGSTLQNLSPKALHAVFERFRWILY 120

Query: 124 EGEVDKSVKFWIELLFSIRKTKFQGYPAIRPELDLVKNPEEISYFHQVSLDKPMDPEFSR 183
            GEVDK V+F I+ LF++RKT+FQ YPA+ PELDLV   ++++  H+VSL++ +DPEFS 
Sbjct: 121 -GEVDKRVQFLIQDLFAVRKTRFQSYPAVPPELDLVDEEDQLT--HEVSLNESIDPEFSL 177

Query: 184 DTFKYDPNYLEK---YEEFTDDEEGSDADVHSEV-GEN--ELDDESGEESMQIKDETESN 237
           D F+ DP+Y+E    YE+      G + ++  +  G++  E D+E GE+ MQI+DE ++N
Sbjct: 178 DVFRLDPDYVENEKHYEQLKKTILGDEEEIEGDQEGDSVVESDEEDGEKHMQIRDEADTN 237

Query: 238 RVNLQRTNYSTVMSSLGVKEAGHKLVKIHHLEPGE 272
            VNL+R  Y T+MS L  +EAGHKL++I H + G+
Sbjct: 238 LVNLRRAIYLTIMSCLDFEEAGHKLLRIIHRQKGQ 272


>Medtr7g093340.1 | pre-mRNA-splicing factor CWC22-like protein | HC
           | chr7:37085194-37084469 | 20130731
          Length = 241

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 42/55 (76%)

Query: 218 ELDDESGEESMQIKDETESNRVNLQRTNYSTVMSSLGVKEAGHKLVKIHHLEPGE 272
           ++ +E GE+ MQI+DET++N VNL+R  Y T+MS L  +EAGHKL++I H + G+
Sbjct: 4   QMYEEDGEKQMQIRDETDTNLVNLRRAIYLTIMSCLDFEEAGHKLLRIIHRQKGQ 58