Miyakogusa Predicted Gene

Lj2g3v1296290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1296290.1 tr|H2J8Y8|H2J8Y8_9CLOT Peptidyl-prolyl cis-trans
isomerase (Precursor) OS=Clostridium sp. BNL1100
GN,34.87,4e-19,PEPTIDYL-PROLYL CIS-TRANS ISOMERASE,NULL;
Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-tran,CUFF.36716.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g039210.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...   390   e-109
Medtr5g039210.2 | peptidyl-prolyl cis-trans isomerase | HC | chr...   327   6e-90
Medtr8g036015.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    65   6e-11
Medtr7g105220.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    64   1e-10
Medtr2g085075.1 | peptidyl-prolyl cis-trans isomerase, putative ...    59   3e-09
Medtr2g023120.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    58   9e-09
Medtr7g095750.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    55   4e-08
Medtr7g095750.2 | peptidyl-prolyl cis-trans isomerase | HC | chr...    55   4e-08
Medtr5g015500.1 | peptidyl-prolyl cis-trans isomerase-like prote...    52   4e-07
Medtr5g015500.2 | peptidyl-prolyl cis-trans isomerase-like prote...    52   4e-07
Medtr7g110980.1 | peptidyl-prolyl cis-trans isomerase | HC | chr...    50   2e-06

>Medtr5g039210.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr5:17260281-17252233 | 20130731
          Length = 220

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/217 (84%), Positives = 199/217 (91%)

Query: 10  IRGCIFFALLSVVSAQEAELGSTRVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYN 69
           +R  +  A  S +S+ E ++GSTRVVFQTNYGDIEFGF+PTVAPKTV+HIFKLVRLGGYN
Sbjct: 4   LRFILLLAFASSISSFEPQMGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYN 63

Query: 70  TNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDP 129
           TNHFFRVDKGFVAQVADVANGRSAPMNEEQRR AEKTVVGEFS VKHVRGILSMGR+DDP
Sbjct: 64  TNHFFRVDKGFVAQVADVANGRSAPMNEEQRRVAEKTVVGEFSDVKHVRGILSMGRHDDP 123

Query: 130 DSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILSS 189
           DSG SSFS+LLGN+PHLDG YAIFG+VTKGDDTL KLEQLPTR+EGIFVMP ERITILSS
Sbjct: 124 DSGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRREGIFVMPTERITILSS 183

Query: 190 YYYDTETENCEVDRSILKRRLAASAVEVERQRMKCFP 226
           YYYDTE E CE DRS+LKRRLAASA+EVERQRMKCFP
Sbjct: 184 YYYDTEAETCEQDRSVLKRRLAASAIEVERQRMKCFP 220


>Medtr5g039210.2 | peptidyl-prolyl cis-trans isomerase | HC |
           chr5:17260281-17252233 | 20130731
          Length = 190

 Score =  327 bits (838), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 155/183 (84%), Positives = 168/183 (91%)

Query: 10  IRGCIFFALLSVVSAQEAELGSTRVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYN 69
           +R  +  A  S +S+ E ++GSTRVVFQTNYGDIEFGF+PTVAPKTV+HIFKLVRLGGYN
Sbjct: 4   LRFILLLAFASSISSFEPQMGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYN 63

Query: 70  TNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDP 129
           TNHFFRVDKGFVAQVADVANGRSAPMNEEQRR AEKTVVGEFS VKHVRGILSMGR+DDP
Sbjct: 64  TNHFFRVDKGFVAQVADVANGRSAPMNEEQRRVAEKTVVGEFSDVKHVRGILSMGRHDDP 123

Query: 130 DSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILSS 189
           DSG SSFS+LLGN+PHLDG YAIFG+VTKGDDTL KLEQLPTR+EGIFVMP ERITILSS
Sbjct: 124 DSGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRREGIFVMPTERITILSS 183

Query: 190 YYY 192
           YYY
Sbjct: 184 YYY 186


>Medtr8g036015.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr8:13176226-13178784 | 20130731
          Length = 160

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 12/142 (8%)

Query: 34  VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD---VANG 90
           V   TN GDI+   F    PKT  +   L   G ++   F R  KGF+ Q  D      G
Sbjct: 3   VTLHTNLGDIKCEIFCDEVPKTSENFLALCASGYFDGTIFHRNIKGFMIQGGDPTGTGKG 62

Query: 91  RSAPMNEEQRREAEKTVVGEFSQVKH-VRGILSMGRYDDPDSGSSSFSILLGNAPHLDGT 149
            ++   ++   E  +++       KH  RGILSM     P++  S F I     PHL+G 
Sbjct: 63  GTSIWGKKFNDEIRESL-------KHNARGILSMAN-SGPNTNGSQFFISYAKHPHLNGL 114

Query: 150 YAIFGRVTKGDDTLAKLEQLPT 171
           Y +FGRV  G + L  +E+ PT
Sbjct: 115 YTVFGRVIHGFEVLDLMEKTPT 136


>Medtr7g105220.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr7:42657101-42654370 | 20130731
          Length = 164

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 27  AELGSTRVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD 86
           AE G+  V  +T+ G      +   AP+T  +  +L R G Y+   F R+ K F+ Q  D
Sbjct: 5   AEGGAPEVTLETSMGSFTVELYYKHAPRTSRNFIELSRRGYYDNVKFHRIIKDFIVQGGD 64

Query: 87  -VANGRSAPMNEEQRREAEKTVVGEFSQVKHV-RGILSMGRYDDPDSGSSSFSILLGNAP 144
               GR        + E E        ++KH   GILSM     P++  S F I L   P
Sbjct: 65  PTGTGRGGESIYGAKFEDEIK-----QELKHTGAGILSMANAG-PNTNGSQFFITLAPCP 118

Query: 145 HLDGTYAIFGRVTKGDDTLAKLEQLPT 171
            LDG + IFGRV++G + + +L  + T
Sbjct: 119 SLDGKHTIFGRVSRGMEIIKRLGSVQT 145


>Medtr2g085075.1 | peptidyl-prolyl cis-trans isomerase, putative |
           HC | chr2:36113579-36121771 | 20130731
          Length = 617

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 15/159 (9%)

Query: 34  VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVADV---ANG 90
           V+  T  GDI    +P   PK+V +     + G Y+   F RV KGF+ Q  D      G
Sbjct: 464 VIMHTTMGDIHMKLYPEECPKSVENFTTHCKNGYYDNLIFHRVIKGFMIQTGDPLGDGTG 523

Query: 91  RSAPMNEEQRREAEKTVVGEFSQVKHVRGI-LSMGRYDDPDSGSSSFSILLGNAPHLDGT 149
             +    E   E  K+       ++H R   LSM     P++  S F I     P LD  
Sbjct: 524 GQSIWGREFEDEFHKS-------LRHDRPFTLSMANA-GPNTNGSQFFITTVATPWLDNK 575

Query: 150 YAIFGRVTKGDDTLAKLEQLPTRKEGIFVMPKERITILS 188
           + +FGRV +G D +  +E++ T K      P + + IL+
Sbjct: 576 HTVFGRVVRGMDVVQAIEKVKTDKTD---KPYQDVKILN 611


>Medtr2g023120.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr2:8092544-8099555 | 20130731
          Length = 545

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 33  RVVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRS 92
           +V+  T  G I+   +P  APK V +  +L   G Y+   F R+ KGF+ Q  D      
Sbjct: 14  KVIVTTTRGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRIIKGFLVQCGD------ 67

Query: 93  APMNEEQRREAEKTVV--GEFS---QVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLD 147
            P       E+    V   EF    + KH RG+++M     P+S  S F + L     LD
Sbjct: 68  -PTGTGTGGESIYGDVFGDEFHSRIKFKH-RGLVAMANSGTPNSNGSQFFVTLDRCDWLD 125

Query: 148 GTYAIFGRVTKGDDTLAKLEQL 169
             + IFG+VT   DTL  L +L
Sbjct: 126 RKHTIFGKVT--GDTLYNLLRL 145


>Medtr7g095750.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr7:38378566-38384594 | 20130731
          Length = 651

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 14/109 (12%)

Query: 68  YNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFS----QVKHV-RGILS 122
           Y    F R+ KGF+AQ  D + G             E    G+F+    ++KH   G+LS
Sbjct: 59  YKGTSFHRIIKGFMAQGGDFSRGNGT--------GGESIYGGKFADENFKLKHDGPGVLS 110

Query: 123 MGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPT 171
           M     P++  S F I+     HLDG + +FG+VTKG + L K+EQL T
Sbjct: 111 MAN-SGPNTNGSQFFIIFKRQAHLDGKHVVFGKVTKGIEILKKMEQLGT 158


>Medtr7g095750.2 | peptidyl-prolyl cis-trans isomerase | HC |
           chr7:38378415-38384646 | 20130731
          Length = 651

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 14/109 (12%)

Query: 68  YNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFS----QVKHV-RGILS 122
           Y    F R+ KGF+AQ  D + G             E    G+F+    ++KH   G+LS
Sbjct: 59  YKGTSFHRIIKGFMAQGGDFSRGNGT--------GGESIYGGKFADENFKLKHDGPGVLS 110

Query: 123 MGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLAKLEQLPT 171
           M     P++  S F I+     HLDG + +FG+VTKG + L K+EQL T
Sbjct: 111 MAN-SGPNTNGSQFFIIFKRQAHLDGKHVVFGKVTKGIEILKKMEQLGT 158


>Medtr5g015500.1 | peptidyl-prolyl cis-trans isomerase-like protein
           | HC | chr5:5377879-5371124 | 20130731
          Length = 592

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 34  VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD-VANGRS 92
           V   T +GD+       +AP+   +   L   G YN   F R  + F+ Q  D    GR 
Sbjct: 347 VQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRG 406

Query: 93  A------PMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHL 146
                  P  +E   +           V   RG++SM     P +  S F IL  +A HL
Sbjct: 407 GESIWGKPFKDELNSKL----------VHSGRGVVSMAN-SGPHTNGSQFFILYKSANHL 455

Query: 147 DGTYAIFGRVTKGDDTLAKLEQLP 170
           +  + +FG V  G  TLA +E++P
Sbjct: 456 NFKHTVFGGVVGGLTTLATMEKVP 479


>Medtr5g015500.2 | peptidyl-prolyl cis-trans isomerase-like protein
           | HC | chr5:5377879-5371124 | 20130731
          Length = 552

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 34  VVFQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDKGFVAQVAD-VANGRS 92
           V   T +GD+       +AP+   +   L   G YN   F R  + F+ Q  D    GR 
Sbjct: 307 VQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRG 366

Query: 93  A------PMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHL 146
                  P  +E   +           V   RG++SM     P +  S F IL  +A HL
Sbjct: 367 GESIWGKPFKDELNSKL----------VHSGRGVVSMAN-SGPHTNGSQFFILYKSANHL 415

Query: 147 DGTYAIFGRVTKGDDTLAKLEQLP 170
           +  + +FG V  G  TLA +E++P
Sbjct: 416 NFKHTVFGGVVGGLTTLATMEKVP 439


>Medtr7g110980.1 | peptidyl-prolyl cis-trans isomerase | HC |
           chr7:45503066-45505731 | 20130731
          Length = 261

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 65/153 (42%), Gaps = 14/153 (9%)

Query: 41  GDIEFGFFPTVAPKTVNHIFKLVRLG----GYNTNHFFRVDKGFVAQVADVANGRSAPMN 96
           G I  G F  VAPKTV + F+ +  G    GY    F R+ K F+ Q  D   G      
Sbjct: 110 GRIVLGLFGEVAPKTVEN-FRALCTGDKGYGYKGCSFHRIIKEFMIQGGDFTEGNGTGGV 168

Query: 97  EEQRREAEKTVVGEFSQVKHV-RGILSMGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGR 155
                  E     E   +KHV  G+LSM     P++  S F I     P LD  + +FG 
Sbjct: 169 SIYGSSFED----ESFALKHVGPGVLSMANAG-PNTNGSQFFICTVKTPWLDNRHVVFGH 223

Query: 156 VTKGDDTLAKLEQLPTRKEGIFVMPKERITILS 188
           V  G D +  LE   T +  I   PK+   I++
Sbjct: 224 VIDGMDVVRTLESQETSRLDI---PKKPCRIVN 253