Miyakogusa Predicted Gene

Lj2g3v1294220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1294220.1 Non Characterized Hit- tr|I3SUG6|I3SUG6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,38.01,1e-18,
,CUFF.36706.1
         (300 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g039440.1 | mucin-like protein | HC | chr5:17367789-173731...   445   e-125
Medtr1g102335.1 | hypothetical protein | LC | chr1:46208614-4620...    67   2e-11

>Medtr5g039440.1 | mucin-like protein | HC | chr5:17367789-17373108
           | 20130731
          Length = 299

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/309 (77%), Positives = 254/309 (82%), Gaps = 19/309 (6%)

Query: 1   MQAFRRITTTAKQFHALSPAVAAAKLRFSSPNEVPATTRWLSSRESRSGEDEWNEAWESA 60
           MQ FRRITTTA   +      + +KL        P T R  SSR  RSGE+EWNEAWESA
Sbjct: 1   MQTFRRITTTATTTNQFKSLFSTSKL--------PTTIRQFSSRNPRSGEEEWNEAWESA 52

Query: 61  WLPEDLTPKNRAPWEGDVN-----LADAETKAFVEEMNENWNERRKGSKDAKEKREE--- 112
           WLP+DLTPK RAPWEGDVN     +ADAETKAFVEEMNENWNERRKG K  KEK EE   
Sbjct: 53  WLPQDLTPKTRAPWEGDVNFASEEVADAETKAFVEEMNENWNERRKGLK--KEKVEEENV 110

Query: 113 NGALYSVENMKKDYRLKKQKLHAGLWMKEIEKLEEAKLGDSDSPAGDD-IQRLLDSCSDI 171
            G +YS+EN+KKDYRLKKQKLHAGLW KEIEKLEEAKLG      GDD IQ+LLDSCSDI
Sbjct: 111 KGGIYSLENIKKDYRLKKQKLHAGLWSKEIEKLEEAKLGGCGGGNGDDDIQKLLDSCSDI 170

Query: 172 FDTGNNDLNNAKVETSEFKNMPDGWETISKNQEGNVWEMSQREEDILLQEFERRIAYSKF 231
           FD+ NNDLNNAK  TSEFKNMPDGWETISKNQ+GN+WEMSQREEDIL+QEFERRIAYSKF
Sbjct: 171 FDSHNNDLNNAKDPTSEFKNMPDGWETISKNQDGNIWEMSQREEDILMQEFERRIAYSKF 230

Query: 232 QIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKCSVSRVPSLSDPSTQPFKEETTSVD 291
           QIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGK SVSRVPSLSDPSTQPFKEE TSVD
Sbjct: 231 QIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKGSVSRVPSLSDPSTQPFKEEKTSVD 290

Query: 292 KAYIPHQRR 300
           K+YIP  RR
Sbjct: 291 KSYIPLGRR 299


>Medtr1g102335.1 | hypothetical protein | LC |
           chr1:46208614-46209128 | 20130731
          Length = 90

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 5/41 (12%)

Query: 65  DLTPKNRAPWEGDVN-----LADAETKAFVEEMNENWNERR 100
           DLTPK RAPWEGD+N     +ADAE KAFVEEMNENWNERR
Sbjct: 18  DLTPKTRAPWEGDMNFNSEVVADAEMKAFVEEMNENWNERR 58