Miyakogusa Predicted Gene

Lj2g3v1294210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1294210.1 Non Characterized Hit- tr|I1IFA4|I1IFA4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,42.2,7e-19,TB2_DP1_HVA22,TB2/DP1/HVA22-related protein; HVA22-LIKE
PROTEIN,NULL; HVA22-LIKE PROTEINS,TB2/DP1/HV,CUFF.36707.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g039530.1 | TB2/DP1, HVA22 family protein | HC | chr5:1740...   208   9e-55
Medtr4g108350.1 | TB2/DP1, HVA22 family protein | HC | chr4:4494...   135   1e-32
Medtr4g108350.2 | TB2/DP1, HVA22 family protein | HC | chr4:4494...   135   1e-32
Medtr3g452470.1 | TB2/DP1, HVA22 family protein | HC | chr3:1918...    72   1e-13
Medtr5g091800.1 | TB2/DP1, HVA22 family protein | HC | chr5:4006...    69   1e-12
Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    67   4e-12
Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    67   4e-12
Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    63   8e-11
Medtr8g096670.1 | TB2/DP1, HVA22 family protein | HC | chr8:4055...    52   2e-07
Medtr8g096670.2 | TB2/DP1, HVA22 family protein | HC | chr8:4055...    51   3e-07

>Medtr5g039530.1 | TB2/DP1, HVA22 family protein | HC |
           chr5:17407066-17403365 | 20130731
          Length = 182

 Score =  208 bits (530), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 99/132 (75%), Positives = 110/132 (83%), Gaps = 6/132 (4%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +ITLFELTFAKVLEVL IWPYAKLILSCWLVLPHFNGAAHVY+ Y+RPFYMN        
Sbjct: 57  LITLFELTFAKVLEVLPIWPYAKLILSCWLVLPHFNGAAHVYKCYLRPFYMNPQLPQMPL 116

Query: 61  XXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRRS 120
                   GTS MWYVPRKNIFSK+DDVL AAERYM+E+GTE F+RLITK DREA++RR+
Sbjct: 117 MP------GTSQMWYVPRKNIFSKQDDVLSAAERYMQENGTEAFERLITKTDREAKARRN 170

Query: 121 GNHMIFDDDYRY 132
           GN+MIFDDDYRY
Sbjct: 171 GNYMIFDDDYRY 182


>Medtr4g108350.1 | TB2/DP1, HVA22 family protein | HC |
           chr4:44946463-44944472 | 20130731
          Length = 173

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 93/131 (70%), Gaps = 18/131 (13%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +ITLFELTFAK+LE + IWPYAKLIL+CWLVLP+F GAA+VY +YVRPF  N        
Sbjct: 60  LITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRPFLANPQ------ 113

Query: 61  XXXXXXXXGTSHMWYVPR-KNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRR 119
                    T ++WYVPR K++F+K+DD++ AAE+Y++E+GTE F+ LI +AD+      
Sbjct: 114 ---------TINIWYVPRKKDVFTKQDDIITAAEKYIKENGTEAFENLIHRADKSKWG-- 162

Query: 120 SGNHMIFDDDY 130
           S +H ++D+ Y
Sbjct: 163 SSHHTMYDETY 173


>Medtr4g108350.2 | TB2/DP1, HVA22 family protein | HC |
           chr4:44946463-44944474 | 20130731
          Length = 164

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 93/131 (70%), Gaps = 18/131 (13%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +ITLFELTFAK+LE + IWPYAKLIL+CWLVLP+F GAA+VY +YVRPF  N        
Sbjct: 51  LITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRPFLANPQ------ 104

Query: 61  XXXXXXXXGTSHMWYVPR-KNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRR 119
                    T ++WYVPR K++F+K+DD++ AAE+Y++E+GTE F+ LI +AD+      
Sbjct: 105 ---------TINIWYVPRKKDVFTKQDDIITAAEKYIKENGTEAFENLIHRADKSKWG-- 153

Query: 120 SGNHMIFDDDY 130
           S +H ++D+ Y
Sbjct: 154 SSHHTMYDETY 164


>Medtr3g452470.1 | TB2/DP1, HVA22 family protein | HC |
           chr3:19188202-19190098 | 20130731
          Length = 158

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 13/116 (11%)

Query: 2   ITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXXX 61
           +TLFEL+F ++L    IWPY KL+   WLVLP FNGAA +Y  YVR +            
Sbjct: 53  MTLFELSFYRILAWFPIWPYMKLVFCIWLVLPMFNGAAFIYENYVRQY------------ 100

Query: 62  XXXXXXXGTSHMWYVPRKNIFSKRD-DVLYAAERYMEEHGTEEFQRLITKADREAR 116
                  G  + +   +K +      D   + ERY++ +G + F+R+I  A++EAR
Sbjct: 101 VKQIGSYGGFNKYPDEQKKVLQMISLDARKSVERYIDRYGPDAFERVIKVAEKEAR 156


>Medtr5g091800.1 | TB2/DP1, HVA22 family protein | HC |
           chr5:40062158-40063517 | 20130731
          Length = 157

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 18/118 (15%)

Query: 2   ITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXXX 61
           ITLFEL+  KVL    IWPY KL+   WLVLP FNGAA++Y  Y R +            
Sbjct: 53  ITLFELSTYKVLYWFPIWPYMKLVFCIWLVLPMFNGAAYIYENYARTY------------ 100

Query: 62  XXXXXXXGTSHMWYVP---RKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREAR 116
                  G    +  P   +K +     D   A ERY++  G + F+R+I  A++EA+
Sbjct: 101 ---VKKFGNYGSYNYPEEYKKVLHMMTFDARKAVERYIDRFGPDAFERVIRAAEKEAK 155


>Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC |
           chr4:36989505-36983804 | 20130731
          Length = 646

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +I LFE  F  +L    +WPY KL++   L++P F  A++VY   +RP  +         
Sbjct: 46  LIYLFEYAFMSLLLWFHLWPYIKLMIIFCLIIPDFGRASYVYNNLIRPMKLQIVSWRL-- 103

Query: 61  XXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRRS 120
                     ++ W    +  F ++DD L  AERYM+E+GTE  ++LI   +   R   +
Sbjct: 104 ----------NNYW----RKCFVEKDDFLMHAERYMQENGTEALEKLIASKNTMCRPEVT 149

Query: 121 GNHMIFDDD 129
            N +I  D+
Sbjct: 150 -NEIIATDN 157


>Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36989578-36983804 | 20130731
          Length = 655

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNXXXXXXXX 60
           +I LFE  F  +L    +WPY KL++   L++P F  A++VY   +RP  +         
Sbjct: 55  LIYLFEYAFMSLLLWFHLWPYIKLMIIFCLIIPDFGRASYVYNNLIRPMKLQIVSWRL-- 112

Query: 61  XXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRRS 120
                     ++ W    +  F ++DD L  AERYM+E+GTE  ++LI   +   R   +
Sbjct: 113 ----------NNYW----RKCFVEKDDFLMHAERYMQENGTEALEKLIASKNTMCRPEVT 158

Query: 121 GNHMIFDDD 129
            N +I  D+
Sbjct: 159 -NEIIATDN 166


>Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36982943-36978372 | 20130731
          Length = 522

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 1   MITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYR---YYVRPFYMNXXXXX 57
           +I LFE  F  +L    +WPY KL++  WL++P F  A++VY     +++P  +      
Sbjct: 55  LIYLFEYAFMNLLLWFQLWPYTKLMIIFWLIIPDFGRASYVYNKLSRFLKPHIVT----- 109

Query: 58  XXXXXXXXXXXGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREAR 116
                      G ++ W    K  F ++D+ L  AE YM+E+GTE  ++LI   +   R
Sbjct: 110 ----------WGLNNSW----KKWFFEKDNFLMHAEIYMKENGTEALEKLIASKNTMCR 154


>Medtr8g096670.1 | TB2/DP1, HVA22 family protein | HC |
          chr8:40550166-40548847 | 20130731
          Length = 110

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 2  ITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRP 48
          +TL E+  A +LE + IW  AKL L  WLVLP F GAA +Y  +VRP
Sbjct: 53 LTLVEIVLASLLEWIPIWYNAKLFLVAWLVLPQFKGAAFLYEKFVRP 99


>Medtr8g096670.2 | TB2/DP1, HVA22 family protein | HC |
          chr8:40550166-40548867 | 20130731
          Length = 100

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%)

Query: 2  ITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRP 48
          +TL E+  A +LE + IW  AKL L  WLVLP F GAA +Y  +VRP
Sbjct: 43 LTLVEIVLASLLEWIPIWYNAKLFLVAWLVLPQFKGAAFLYEKFVRP 89