Miyakogusa Predicted Gene

Lj2g3v1280010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1280010.1 Non Characterized Hit- tr|B9S4J7|B9S4J7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,25.91,2e-18,seg,NULL,NODE_26427_length_1950_cov_33.454357.path1.1
         (472 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g040340.1 | phytochrome kinase substrate protein, putative...   405   e-113
Medtr8g055860.1 | phytochrome kinase substrate protein, putative...   337   2e-92
Medtr7g088200.1 | phytochrome kinase substrate protein, putative...    56   9e-08

>Medtr5g040340.1 | phytochrome kinase substrate protein, putative |
           HC | chr5:17746082-17744467 | 20130731
          Length = 465

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 265/508 (52%), Positives = 318/508 (62%), Gaps = 79/508 (15%)

Query: 1   MVITATPSNSSLHHLKTFNSQNNNNLLRDASFSSYLNNKE--ETFADSSHPF--TRKDPL 56
           MVI+AT          TF SQNNNN LR  SFSSYLNNKE  + FADS HPF   RK+PL
Sbjct: 1   MVISAT----------TFTSQNNNNNLRGGSFSSYLNNKEVKDPFADSIHPFISNRKEPL 50

Query: 57  HQGVKKEDDEEIGVFEAEKYFHGGEIGSPRVAIIGASKYQHQKKEETAQETRRYKVLYGT 116
           H GVKKE+D EIGVF+AEKYF+G EI +PR+A + A+K ++ K +   QE R+ KV YGT
Sbjct: 51  HLGVKKEEDGEIGVFDAEKYFNGVEIETPRIATLDANKLKYLKNQ---QENRKCKVQYGT 107

Query: 117 PSVRSESSLNSQSALLPXXXXXXXXXXXXXXX--XXXFLAGLGCKCYCSDKNSVDISDHA 174
           PSV SESSLNSQSALL                      LA LGCKC C DKNSVD+SDH 
Sbjct: 108 PSVGSESSLNSQSALLQTTLKNSTSSNSRKNQVHRKSLLATLGCKCSCYDKNSVDVSDH- 166

Query: 175 AGEISFNKAATYGAVHGKRTSKKLINTDAD-SNHSAK----ATKPHAEIFINKDVYFQKP 229
           AGEISFNK+    AV GK TS+KL   D D S+HS K     T+  +E+ +NKDVY QK 
Sbjct: 167 AGEISFNKS----AVQGKTTSEKLFKHDQDASDHSIKNKKTETRATSELLMNKDVYLQKQ 222

Query: 230 EKLPFSTVNSSSGNQPLKVQI-QVEKPRKSLEVFGSPILDNISKSVSFDRRLSMPSWESA 288
           EK+            P K+Q+ QV+ PRK+LEVFGSPILD   KS+SFD RL +PSWE+A
Sbjct: 223 EKV-----------SPYKMQLQQVDNPRKTLEVFGSPILDERCKSISFDMRLKIPSWEAA 271

Query: 289 NSVG----NFXXX-------XXXXXXXXLFEIDSFTG-KSNPFLGK-STSNIASGCASPT 335
           + +     +F                  LFEI+SFTG K++ FL + +TS++ASGC SP 
Sbjct: 272 SKLEEQEIDFSTNCDDDDDDVGSDASSDLFEIESFTGNKTSSFLSRTTTSHVASGCTSP- 330

Query: 336 TCYAPSEASIAWSVVTASAVDF------DDQRSVATIRSPIRTSSLTSSNVKPKAGKEMQ 389
             YAPSEASI WSVVTASAVD+      +DQ SV TIRSPIRT S  S N K K  KEM 
Sbjct: 331 NFYAPSEASIEWSVVTASAVDYSAVSDHEDQGSVVTIRSPIRT-SFNSLNGKHKINKEMP 389

Query: 390 RRHSSNLLGCKSQKAVGVAVDAFT-TCEKPGSTPQIRRKSEMFPHVTKLQGGAKEENFGA 448
           RR    LLGC SQKAVGVA DAFT T EK G+       ++M P +T+     K E+FGA
Sbjct: 390 RRRPGKLLGCNSQKAVGVAGDAFTATNEKHGTN------AKMLPQMTRF----KVESFGA 439

Query: 449 KHGQQHVYAK----RTPSPRASSQLLYI 472
           ++ +QH Y K    R+ SP   +QLLYI
Sbjct: 440 RN-EQHGYGKPPLRRSNSPHG-AQLLYI 465


>Medtr8g055860.1 | phytochrome kinase substrate protein, putative |
           HC | chr8:24335925-24337662 | 20130731
          Length = 491

 Score =  337 bits (863), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 240/511 (46%), Positives = 298/511 (58%), Gaps = 59/511 (11%)

Query: 1   MVITATPSNSSLHHLKTFNSQNNNNL--LRDASFSSYLNNKEETF-------ADSSHPFT 51
           M   ++ + ++LH ++TFN++NNNN   L DA FS YLN KE  F       + +++PF 
Sbjct: 1   MFTLSSTTKTNLHQMQTFNTENNNNNNHLHDAVFSPYLNIKEGNFIAKIGESSQTNNPFI 60

Query: 52  --RKDPLHQGVKKEDDEEIGVFEAEKYFHGGEIGSPRVAIIGASKYQHQKKEETAQETRR 109
             R  PLHQ    E  EEIGVF AEKYF+ GE+ +PR     ++KY  Q+KE  A ETR+
Sbjct: 61  NHRNSPLHQ---VEKAEEIGVFGAEKYFNRGEVDTPR----PSTKYLPQRKETMAIETRK 113

Query: 110 YKVLYGTPSVRSESSLNSQSALLPXXXXXXXXXXXXXXXXXXFLAGLGCKCYCSDKNSVD 169
           Y+V YGTPS+ S S+ NSQ+ALL                    L+ L  KC CSDKNSVD
Sbjct: 114 YQVEYGTPSISSVSTWNSQNALLKSGVRNSIGNSKEKEHAKSVLSSLRLKCSCSDKNSVD 173

Query: 170 ISDHAAGEISF-NKAATYGAVHGKRTSKKLINTDADSNHSAKATKPHAEIFINKDVYFQK 228
           I+DHA+ EISF NK + YGAV GK T KK+ N   D + S +  KP +EI INKDVYFQK
Sbjct: 174 INDHAS-EISFNNKTSKYGAVQGKTTPKKVFNLGLDDDLSVRIRKPSSEILINKDVYFQK 232

Query: 229 PEKLPFSTVN------SSSGNQPLKVQ--IQVEK-PRKSLEVFGS--PILDNISK-SVSF 276
            EKL     N      S+S N  +++Q  +  EK PRKSLEVFGS  PIL N  + S++ 
Sbjct: 233 QEKLRVGLNNEKNSLASNSRNHLVQMQNPLDGEKTPRKSLEVFGSPNPILINTKRNSLTN 292

Query: 277 DRRLSMPSWESANSVG--NFXXXXXXXXXXXLFEIDSFTGK--SNPFLGKSTSNIASGCA 332
           D+RL  P  E  ++    +            LFEI+S  GK  +N FL + TS+ AS C 
Sbjct: 293 DKRLIFPKMEEIDNANYDDDDDDAASDASSDLFEIESLKGKPSNNNFLTRQTSDAASSCL 352

Query: 333 SPTTCYAPSEASIAWSVVTASAV---DFDDQRSVATIRSPIRTSSLTSSNVKPKAGKEMQ 389
           SP  CYAPSEASI WSVVTASA    D +DQ S  TIRSPIRT       +KPK  KE  
Sbjct: 353 SP-NCYAPSEASIEWSVVTASAAVMSDCEDQMSEFTIRSPIRTP------LKPKVAKETP 405

Query: 390 RRHSSNLLGCKSQKAVGVAVDAFTTCEKPGSTPQI--RRKSEMFPHVTKLQGGAKEENFG 447
           RR    LLGCKS KAV V+ DAF T EK   +P+I  R K+     V +  G   E N+G
Sbjct: 406 RRRPGMLLGCKSHKAVRVSGDAFITYEKQSLSPKISSRNKNNTNSQVARFPG---ETNYG 462

Query: 448 AK-HGQQHVYAKRTPSPRAS-----SQLLYI 472
           AK HGQQH Y   TP  +AS     S+LLYI
Sbjct: 463 AKRHGQQHGYT--TPPLQASNSPHASKLLYI 491


>Medtr7g088200.1 | phytochrome kinase substrate protein, putative |
           HC | chr7:34330690-34329194 | 20130731
          Length = 498

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 160/452 (35%), Gaps = 98/452 (21%)

Query: 26  LLRD--ASFSSYLNNKEETFADSSHPFTRKDPLHQGVKKEDDEEIGVFEAEKYFHGGEIG 83
           +LRD  ASFSSYL  ++    +  H     DP           E+ +F+A KYF+ G   
Sbjct: 21  ILRDIDASFSSYLTPQKPNNHNHHHKL--DDPT---------SELSIFDAHKYFNEGTNN 69

Query: 84  ----------------------SPRV----------AIIGASKYQHQKKEETAQETRRYK 111
                                 SP V           I   ++Y      +     R Y+
Sbjct: 70  DNIQKVTISSNNNNNNNNNSRVSPVVINVNNETESIVIPDTTRYSSASSMDGYANIRNYR 129

Query: 112 VL---YGTPSVRSESSLNSQSALLPXXXXXXXXXXXXXXXXXXFLAG------------L 156
                  TP+  SE+S NSQ  LL                     +             L
Sbjct: 130 ARSFHAATPTASSEASWNSQQGLLSHPAGAISVNIKNPSNPNPNNSNKHKSSLSKPNWFL 189

Query: 157 GCKCYCSDKNSVDISDHAAGEISFNK---AATYGAVHGKRTSKKLINTDADSNHSA-KAT 212
             KC C+ K SV +++    E+  N     +          +    N D   NH   K+ 
Sbjct: 190 RRKCPCTGKKSVQVNEKKLTELPKNNIKIPSPISPPPPMNNNWINNNIDQTQNHVVTKSQ 249

Query: 213 KPHAEIFINKDVYFQKPEKLPFSTVNSSSGNQPLKVQIQVEKP-RKSLEVFGSP---ILD 268
           +    +     V +      P    NSSS    LK  I +E P R+SLEVF  P    +D
Sbjct: 250 RFQPVVTTTVRVPYTDGFTFPVLNPNSSSTTTKLKNGIVLEDPPRESLEVFRPPEELTVD 309

Query: 269 NISKSVSFDRRLSMPSWESANSVGNFXXXXXXXXXXXLFEIDSFTGKSNP------FLGK 322
             + +  F   +S    +  ++  +            LFEI+SF+  +        +   
Sbjct: 310 TKTLNFQFPPGISRIVIDDNDAASD--------ASSDLFEIESFSTATQSSYSAAVYRRN 361

Query: 323 STSNIASGCASP--TTCYAPSEASIAWSVVTASAVDFDDQRSVATI----RSPIRTSSLT 376
           S  +   G  +   T CY PSEASI WSV TA      D+ S+A +           S+T
Sbjct: 362 SRDSFDEGSVTTAMTDCYEPSEASIDWSVTTAEGY---DESSIAAVSVGGYGGGGGGSVT 418

Query: 377 SSNVKPKAGKEMQRRHSSNLLGCKSQKAVGVA 408
           + + K K G  +       L+ C+ +KAV V 
Sbjct: 419 AEHWKRKGGNGL-------LVSCRCEKAVSVG 443