Miyakogusa Predicted Gene

Lj2g3v1279990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1279990.1 CUFF.36684.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467540.2 | CAAX amino terminal protease family protein | ...   139   3e-33
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...   139   3e-33
Medtr8g467540.3 | CAAX amino terminal protease family protein | ...   138   4e-33

>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 87/148 (58%), Gaps = 2/148 (1%)

Query: 62  KSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSLVLTVWLEVNALPSLEVE 121
           KS TKLQ   +D   +WPILRRWEVPW+WQT SLTS+AC L  VLT   E  ALP L + 
Sbjct: 65  KSDTKLQ--DQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIR 122

Query: 122 GDELSSDEEAVIFLVNHSFATAIVLQVLYGITNMYQPLPQDFFKYDWREPFNLQKXXXXX 181
            D LS DE+A +  ++    TA VL ++Y + N YQPLP+ FFKYD REPFNLQK     
Sbjct: 123 PDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLW 182

Query: 182 XXXXXXXXXXXXXXXXXXMSFFSEESQE 209
                             +SFF+ E+ E
Sbjct: 183 AGVGLVGALVSIGLTGVAVSFFNGETPE 210


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 87/148 (58%), Gaps = 2/148 (1%)

Query: 62  KSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSLVLTVWLEVNALPSLEVE 121
           KS TKLQ   +D   +WPILRRWEVPW+WQT SLTS+AC L  VLT   E  ALP L + 
Sbjct: 65  KSDTKLQ--DQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIR 122

Query: 122 GDELSSDEEAVIFLVNHSFATAIVLQVLYGITNMYQPLPQDFFKYDWREPFNLQKXXXXX 181
            D LS DE+A +  ++    TA VL ++Y + N YQPLP+ FFKYD REPFNLQK     
Sbjct: 123 PDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLW 182

Query: 182 XXXXXXXXXXXXXXXXXXMSFFSEESQE 209
                             +SFF+ E+ E
Sbjct: 183 AGVGLVGALVSIGLTGVAVSFFNGETPE 210


>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 87/148 (58%), Gaps = 2/148 (1%)

Query: 62  KSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALSLVLTVWLEVNALPSLEVE 121
           KS TKLQ   +D   +WPILRRWEVPW+WQT SLTS+AC L  VLT   E  ALP L + 
Sbjct: 65  KSDTKLQ--DQDSRSEWPILRRWEVPWEWQTVSLTSLACGLGFVLTGLAEATALPYLGIR 122

Query: 122 GDELSSDEEAVIFLVNHSFATAIVLQVLYGITNMYQPLPQDFFKYDWREPFNLQKXXXXX 181
            D LS DE+A +  ++    TA VL ++Y + N YQPLP+ FFKYD REPFNLQK     
Sbjct: 123 PDMLSLDEKAELLFIDQGITTAAVLGIIYSVFNTYQPLPEGFFKYDLREPFNLQKGWLLW 182

Query: 182 XXXXXXXXXXXXXXXXXXMSFFSEESQE 209
                             +SFF+ E+ E
Sbjct: 183 AGVGLVGALVSIGLTGVAVSFFNGETPE 210