Miyakogusa Predicted Gene

Lj2g3v1277860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277860.1 Non Characterized Hit- tr|I1LC11|I1LC11_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37938
PE,27.08,6e-19,SUBFAMILY NOT NAMED,NULL; MIXED-LINEAGE LEUKEMIA 5,
MLL5,NULL,CUFF.36676.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g040700.1 | PHD finger protein MALE sterility-like protein...   445   e-125
Medtr5g077750.1 | PHD finger protein MALE meiocyte DEATH protein...   158   4e-39
Medtr4g035550.1 | PHD finger plant-like protein | HC | chr4:1225...   112   3e-25
Medtr1g076990.1 | PHD finger plant-like protein | HC | chr1:3435...    96   4e-20
Medtr1g076990.3 | PHD finger plant-like protein | HC | chr1:3435...    96   5e-20
Medtr1g076990.2 | PHD finger plant-like protein | HC | chr1:3435...    96   5e-20
Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-4473384...    52   4e-07

>Medtr5g040700.1 | PHD finger protein MALE sterility-like protein |
           HC | chr5:17892813-17888688 | 20130731
          Length = 666

 Score =  445 bits (1145), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/265 (82%), Positives = 236/265 (89%), Gaps = 13/265 (4%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNHE 60
           MELRLVNG+A+S PWFGRWGYKFGRG FGVTQSMY KAIEAIRS+PLYLLTHHI NSNHE
Sbjct: 210 MELRLVNGIAYSEPWFGRWGYKFGRGCFGVTQSMYQKAIEAIRSMPLYLLTHHIANSNHE 269

Query: 61  IPIIFSRYQTLSDQSLVTLGDLFYYMLELKSRLPRETSIGA-SSNAMAETNCRWSPKRIE 119
           IP+IF RYQTLSD SLVTLGDLF+YMLELKSRLPRET IG+ +++A+ ETNCRWSPKRIE
Sbjct: 270 IPLIFQRYQTLSDHSLVTLGDLFHYMLELKSRLPRETCIGSFNTSALVETNCRWSPKRIE 329

Query: 120 MATRVIVEALKRTEFRWISRQQVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNP 179
           MATRVIVEALKRTEFRWISRQ+VRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNP
Sbjct: 330 MATRVIVEALKRTEFRWISRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNP 389

Query: 180 VTKVLEYCLEDISNVYPC-----------KKVKENKYKITRAQLIKDIHYLYKYILIDPK 228
           VTKVLEYCLEDISNVYPC            KVK+ KYKITR QL+KD+  LYKYILID K
Sbjct: 390 VTKVLEYCLEDISNVYPCHEGLVMSSSSSNKVKD-KYKITRGQLMKDMICLYKYILIDTK 448

Query: 229 PVIGSEFLSGITLASRIILDTKYFI 253
           P+IGSEFLS I LA+RIILDTK+ I
Sbjct: 449 PIIGSEFLSAIPLAARIILDTKHLI 473


>Medtr5g077750.1 | PHD finger protein MALE meiocyte DEATH protein |
           HC | chr5:33185832-33182972 | 20130731
          Length = 715

 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 166/326 (50%), Gaps = 79/326 (24%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNH- 59
           M+LRL++GVA+   WFGRWGY F RGSFGVTQ  Y +AIE + SL L  +   +  + + 
Sbjct: 193 MDLRLLHGVAYGHSWFGRWGYGFCRGSFGVTQQNYDEAIEILGSLVLDDIVRDLSKTKYH 252

Query: 60  -EIPIIFSRYQTLSDQSLVTLGDLFYYMLELKSRLP--RETSIGASSNAMAETN---C-- 111
            ++  +   Y+ +S+  ++T+ +L  +ML +KSR P  + T   +S NA+++T+   C  
Sbjct: 253 KDVKQMIRFYRDMSETHIITIRELLRFMLTIKSRRPVSKMTVTFSSPNAVSDTDSPSCST 312

Query: 112 -----------------------------------------RWSPKRIEMATRVIVEALK 130
                                                    RW  +R+E A +VIVEALK
Sbjct: 313 SAFMSRNASKPVLSSSRSNFTMKEKSARYKKFSTAVANMDSRWPTRRLEFAAQVIVEALK 372

Query: 131 RTEF-----RWISRQQVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVLE 185
             +        ++RQ VRDAAR +IGDTGLLD+VLKSL N +VGNY+VRR++N  +++LE
Sbjct: 373 EDKAMKPGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRTVNSSSRILE 432

Query: 186 YCLEDISNVYPCKKVKENKYKITRAQLIK------------------DIHYLYKYILIDP 227
           Y ++++   +   +++     +     ++                  D+ YLYK +L   
Sbjct: 433 YTIDELRKGHQAPEMEHGVLTVADKPQVESSTLSSSSSSVPGNDVYSDVVYLYKNVL--- 489

Query: 228 KPVIGSEFLSGITLASRIILDTKYFI 253
              +G      + LA + ILD ++F+
Sbjct: 490 ---LGYPDSEAVELAVQTILDCRHFV 512


>Medtr4g035550.1 | PHD finger plant-like protein | HC |
           chr4:12252668-12255959 | 20130731
          Length = 732

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 34/273 (12%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNHE 60
           ++ RL++ +A    W+G WGY+FG G + +T+  Y  A++ + ++PL  L+      ++ 
Sbjct: 237 LDYRLLHAIARGHSWYGNWGYEFGTGCYALTEDAYKMAVDNLSNMPLSSLSFQDRGPHNP 296

Query: 61  IPIIFSRYQTLSDQSLVTLGDLFYYMLELKS--RLPRETSIGASSNAMAETN--CRWSPK 116
           +  + S YQ+L++  L T+ DLF ++LEL    R PR              N  C W+  
Sbjct: 297 VQSVISLYQSLAETELRTMKDLFSFLLELVQNFRKPRSAETANLHEQTTPCNLLCSWTRN 356

Query: 117 RIEMATRVIVEALKRT----EFRWISRQQVRDAARAYIGDTGLLDFVLKSL-GNHVVGNY 171
            +E   + +++ L  +    E +W++RQ ++ A    IG   LLDF LK L G  V    
Sbjct: 357 DVEDVQQALIKVLLASSACNEAKWVTRQTLKGAVGRRIGSPELLDFGLKHLQGKSVAKGM 416

Query: 172 LVRRSLNPVTKVLEYCLEDISN------VYPCKKVKENKYKITRAQLIKDIHYLYKYI-- 223
           +V    NP +  +E+ L    N       YP           T+ Q+I D+ +L+  I  
Sbjct: 417 VVCSRCNPTSSAIEFRLGHWPNGFSSIASYP-----------TKEQVISDLTFLFNSIVH 465

Query: 224 ---LIDPKPVIGSEFLSGITLASRIILDTKYFI 253
              +I  +P I  + ++    ++R +LD K F+
Sbjct: 466 PEKMIKYRPKINRKTVAD---SARKLLDCKQFM 495


>Medtr1g076990.1 | PHD finger plant-like protein | HC |
           chr1:34353455-34359940 | 20130731
          Length = 707

 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 25/239 (10%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNHE 60
           +E RL++ +    PW+G WGY FG GS+ +TQ  Y  A+E++ +LPL +        +  
Sbjct: 240 LEYRLLHAIMKGNPWYGEWGYNFGSGSYCLTQEAYKSAVESLSNLPLSIFLSQEQKPHSR 299

Query: 61  IPIIFSRYQTLSDQSLVTLGDLFYYML--------------ELKSRLPRETSIGASSNAM 106
           +  +   Y++LS+  LV + DLF +++              ++  +  R  + G SS+  
Sbjct: 300 VQDMILYYRSLSEHELVNMRDLFCFLMGMLHDARKTASKSDDITCKKRRINASGLSSS-- 357

Query: 107 AETNCRWSPKRIEMATRVIVEALKR-TEFRWISRQQVRDAARAYIGDTGLLDFVLKSLGN 165
                 W    +E     ++  L+  +   W+S + +R A    +    LLD+ L  LG 
Sbjct: 358 ------WEKNDVERVEEAMLRVLRAVSGSNWVSGRALRGAV-CKLACPELLDYCLAELGG 410

Query: 166 HVVGNYLVRRSLNPVTKVLEYCLEDISNVYPCKKVKENKYKITRAQLIKDIHYLYKYIL 224
            VV   +V    NP T V E+ + D +NV+          + +   L++ + YLY  +L
Sbjct: 411 KVVYGGIVNSRCNPQTGVNEFRI-DATNVFMANHNSSGSKRPSEENLLQCLRYLYDSLL 468


>Medtr1g076990.3 | PHD finger plant-like protein | HC |
           chr1:34353514-34359940 | 20130731
          Length = 537

 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 25/239 (10%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNHE 60
           +E RL++ +    PW+G WGY FG GS+ +TQ  Y  A+E++ +LPL +        +  
Sbjct: 70  LEYRLLHAIMKGNPWYGEWGYNFGSGSYCLTQEAYKSAVESLSNLPLSIFLSQEQKPHSR 129

Query: 61  IPIIFSRYQTLSDQSLVTLGDLFYYML--------------ELKSRLPRETSIGASSNAM 106
           +  +   Y++LS+  LV + DLF +++              ++  +  R  + G SS+  
Sbjct: 130 VQDMILYYRSLSEHELVNMRDLFCFLMGMLHDARKTASKSDDITCKKRRINASGLSSS-- 187

Query: 107 AETNCRWSPKRIEMATRVIVEALKR-TEFRWISRQQVRDAARAYIGDTGLLDFVLKSLGN 165
                 W    +E     ++  L+  +   W+S + +R A    +    LLD+ L  LG 
Sbjct: 188 ------WEKNDVERVEEAMLRVLRAVSGSNWVSGRALRGAV-CKLACPELLDYCLAELGG 240

Query: 166 HVVGNYLVRRSLNPVTKVLEYCLEDISNVYPCKKVKENKYKITRAQLIKDIHYLYKYIL 224
            VV   +V    NP T V E+ + D +NV+          + +   L++ + YLY  +L
Sbjct: 241 KVVYGGIVNSRCNPQTGVNEFRI-DATNVFMANHNSSGSKRPSEENLLQCLRYLYDSLL 298


>Medtr1g076990.2 | PHD finger plant-like protein | HC |
           chr1:34354596-34359940 | 20130731
          Length = 565

 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 25/239 (10%)

Query: 1   MELRLVNGVAHSAPWFGRWGYKFGRGSFGVTQSMYHKAIEAIRSLPLYLLTHHIGNSNHE 60
           +E RL++ +    PW+G WGY FG GS+ +TQ  Y  A+E++ +LPL +        +  
Sbjct: 98  LEYRLLHAIMKGNPWYGEWGYNFGSGSYCLTQEAYKSAVESLSNLPLSIFLSQEQKPHSR 157

Query: 61  IPIIFSRYQTLSDQSLVTLGDLFYYML--------------ELKSRLPRETSIGASSNAM 106
           +  +   Y++LS+  LV + DLF +++              ++  +  R  + G SS+  
Sbjct: 158 VQDMILYYRSLSEHELVNMRDLFCFLMGMLHDARKTASKSDDITCKKRRINASGLSSS-- 215

Query: 107 AETNCRWSPKRIEMATRVIVEALKR-TEFRWISRQQVRDAARAYIGDTGLLDFVLKSLGN 165
                 W    +E     ++  L+  +   W+S + +R A    +    LLD+ L  LG 
Sbjct: 216 ------WEKNDVERVEEAMLRVLRAVSGSNWVSGRALRGAV-CKLACPELLDYCLAELGG 268

Query: 166 HVVGNYLVRRSLNPVTKVLEYCLEDISNVYPCKKVKENKYKITRAQLIKDIHYLYKYIL 224
            VV   +V    NP T V E+ + D +NV+          + +   L++ + YLY  +L
Sbjct: 269 KVVYGGIVNSRCNPQTGVNEFRI-DATNVFMANHNSSGSKRPSEENLLQCLRYLYDSLL 326


>Medtr3g097570.1 | DYAD-like protein | HC | chr3:44730358-44733848 |
           20130731
          Length = 455

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 6/109 (5%)

Query: 86  MLELKSRLPRETSIGASSNAMAETNCRWSPKRIEMATRVIVEALKRTEFRW---ISRQQV 142
           ++E+K       S   +     ++  RWS +R ++A + + E LK     +   I+R  +
Sbjct: 82  LIEVKEEYAGNQSSSKNKRKKHDSKDRWSSERYKLAEQSMWEVLKAEGATFEHPITRPVL 141

Query: 143 RDAARAYIGDTGLLDFVLKSLGNHVV--GNYLVRRSLNPVTKVLEYCLE 189
           R AAR +IGDTGLLD +LK +   V   G    RR  NP   ++EY LE
Sbjct: 142 RSAARKFIGDTGLLDHLLKHIDRKVAPGGTDRFRRWFNP-DGIMEYWLE 189