Miyakogusa Predicted Gene
- Lj2g3v1277840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1277840.1 Non Characterized Hit- tr|I1JE48|I1JE48_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,61.73,2e-17,coiled-coil,NULL,CUFF.36674.1
(314 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g040780.1 | hypothetical protein | HC | chr5:17933707-1793... 275 5e-74
Medtr5g040780.2 | hypothetical protein | HC | chr5:17933707-1793... 273 2e-73
>Medtr5g040780.1 | hypothetical protein | HC |
chr5:17933707-17931641 | 20130731
Length = 374
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 194/275 (70%), Gaps = 10/275 (3%)
Query: 4 MRGEQLKHDHREKDFGNFHGNFDLNETAEEFEQQPDVQWELLENHQSRCNELSGKMEKHG 63
M EQLK+ +EK NFH NFDLN TAEE E +PD+Q EL ENH S+ +ELS EKH
Sbjct: 1 MNSEQLKNGQQEKRCRNFHENFDLNVTAEELEDEPDLQCELAENHYSQYSELSETTEKHV 60
Query: 64 DNLSVEAQQHGEQVPQTRTFEGRVDHLLFLAQSAEVVA-QSEDRVAQTHTN--NQSKDVH 120
DN S+EA +H EQVPQ TFEG VD L LAQSAE++A Q+ED VA+TH N NQ
Sbjct: 61 DNRSMEANKHEEQVPQANTFEGCVDDLFILAQSAEILAAQTEDSVAKTHINTENQESQCD 120
Query: 121 NNMVDQISQEHASIVTADDQECSRKVHEGLSAFSHVSSQRNRLCHEVVRTRLTQIRKHAR 180
N++ +I+ + DQECS+++ +G + SHVSS+R LC+EV TRLTQIRK AR
Sbjct: 121 TNLITV-----TAILLSIDQECSQELLDG--SVSHVSSERCGLCYEVTGTRLTQIRKQAR 173
Query: 181 CKYLIMDEETTEHNQCKHSRGKTMRLSQIKHQARCKSKNDLSPPPMIIGPRNEQPRGRIL 240
KY I+D + + NQ KH + KT LSQ+K QARCKSKNDLS MI GP N+Q +GRIL
Sbjct: 174 FKYRILDHDRADDNQFKHLQRKTTCLSQMKQQARCKSKNDLSSLQMINGPENKQRQGRIL 233
Query: 241 RLSKMKHQARCKENSTVKEGAEEHMDMSQYCNRLK 275
RLS+MK+QAR K N+TVKEG EEH+ ++++CNR +
Sbjct: 234 RLSQMKNQARSKNNATVKEGTEEHVCVNKHCNRCR 268
>Medtr5g040780.2 | hypothetical protein | HC |
chr5:17933707-17930148 | 20130731
Length = 483
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 194/275 (70%), Gaps = 10/275 (3%)
Query: 4 MRGEQLKHDHREKDFGNFHGNFDLNETAEEFEQQPDVQWELLENHQSRCNELSGKMEKHG 63
M EQLK+ +EK NFH NFDLN TAEE E +PD+Q EL ENH S+ +ELS EKH
Sbjct: 1 MNSEQLKNGQQEKRCRNFHENFDLNVTAEELEDEPDLQCELAENHYSQYSELSETTEKHV 60
Query: 64 DNLSVEAQQHGEQVPQTRTFEGRVDHLLFLAQSAEVVA-QSEDRVAQTHTN--NQSKDVH 120
DN S+EA +H EQVPQ TFEG VD L LAQSAE++A Q+ED VA+TH N NQ
Sbjct: 61 DNRSMEANKHEEQVPQANTFEGCVDDLFILAQSAEILAAQTEDSVAKTHINTENQESQCD 120
Query: 121 NNMVDQISQEHASIVTADDQECSRKVHEGLSAFSHVSSQRNRLCHEVVRTRLTQIRKHAR 180
N++ +I+ + DQECS+++ +G + SHVSS+R LC+EV TRLTQIRK AR
Sbjct: 121 TNLITV-----TAILLSIDQECSQELLDG--SVSHVSSERCGLCYEVTGTRLTQIRKQAR 173
Query: 181 CKYLIMDEETTEHNQCKHSRGKTMRLSQIKHQARCKSKNDLSPPPMIIGPRNEQPRGRIL 240
KY I+D + + NQ KH + KT LSQ+K QARCKSKNDLS MI GP N+Q +GRIL
Sbjct: 174 FKYRILDHDRADDNQFKHLQRKTTCLSQMKQQARCKSKNDLSSLQMINGPENKQRQGRIL 233
Query: 241 RLSKMKHQARCKENSTVKEGAEEHMDMSQYCNRLK 275
RLS+MK+QAR K N+TVKEG EEH+ ++++CNR +
Sbjct: 234 RLSQMKNQARSKNNATVKEGTEEHVCVNKHCNRCR 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 274 LKENSEAQKESIPVKRLRLTQLRREVRAGSLSSIMQRPGQN 314
L NSEA KE +PVKRLRLTQLRREVR G+ S MQ P +N
Sbjct: 443 LAANSEAHKEKLPVKRLRLTQLRREVRIGNQCSAMQGPDEN 483