Miyakogusa Predicted Gene

Lj2g3v1277620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277620.1 Non Characterized Hit- tr|I3S5Q8|I3S5Q8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.87,2e-18,
,CUFF.36673.1
         (47 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g041930.1 | YGL010w-like protein | HC | chr5:18420916-1842...    92   1e-19
Medtr3g435200.1 | YGL010w-like protein | HC | chr3:11485231-1148...    67   4e-12
Medtr3g435230.1 | YGL010w-like protein | HC | chr3:11502432-1149...    66   7e-12
Medtr3g435250.1 | YGL010w-like protein | HC | chr3:11507990-1150...    61   3e-10
Medtr3g435170.1 | YGL010w-like protein | HC | chr3:11473247-1146...    54   4e-08

>Medtr5g041930.1 | YGL010w-like protein | HC |
           chr5:18420916-18425317 | 20130731
          Length = 202

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           MAPFFVLLEALQT+FGYEPYPGFHSIVQA++EANI EWQESKQ+LIS
Sbjct: 156 MAPFFVLLEALQTVFGYEPYPGFHSIVQAKVEANIEEWQESKQRLIS 202


>Medtr3g435200.1 | YGL010w-like protein | HC |
           chr3:11485231-11484116 | 20130731
          Length = 195

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 36/47 (76%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           MAPFFV+LE LQ+  GYEPYPGF   VQA I+ANI EW+  +QK IS
Sbjct: 149 MAPFFVVLEILQSSIGYEPYPGFQRKVQARIDANIKEWKNKQQKKIS 195


>Medtr3g435230.1 | YGL010w-like protein | HC |
           chr3:11502432-11499092 | 20130731
          Length = 197

 Score = 65.9 bits (159), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 37/47 (78%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           M PFFV+LE LQ+  GYEPYPGF + V+A IEANI EW++ +QK +S
Sbjct: 151 MGPFFVILEVLQSSIGYEPYPGFQTNVKARIEANIKEWKDKQQKKLS 197


>Medtr3g435250.1 | YGL010w-like protein | HC |
           chr3:11507990-11505058 | 20130731
          Length = 197

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 37/47 (78%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS 47
           M PFFV+LE LQ+  GYEPYPGF + V+A IEANI E+++ +QK +S
Sbjct: 151 MEPFFVILEVLQSSIGYEPYPGFQTKVKARIEANIKEFKDIEQKKLS 197


>Medtr3g435170.1 | YGL010w-like protein | HC |
           chr3:11473247-11469387 | 20130731
          Length = 197

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 28/35 (80%)

Query: 1   MAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANI 35
           MAPFFV+LE LQ+  GYEPYPGF   VQA I+ANI
Sbjct: 151 MAPFFVVLEILQSSIGYEPYPGFQKKVQARIDANI 185