Miyakogusa Predicted Gene

Lj2g3v1277590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277590.1 tr|A9RG92|A9RG92_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65723
,33.63,3e-18,Arabinanase/levansucrase/invertase,Glycosyl hydrolase
family 43, five-bladed beta-propellor domain; ,CUFF.36651.1
         (496 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g042100.1 | arabinanase/levansucrase/invertase, putative |...   576   e-164

>Medtr5g042100.1 | arabinanase/levansucrase/invertase, putative | HC
           | chr5:18518659-18517077 | 20130731
          Length = 487

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/481 (64%), Positives = 358/481 (74%), Gaps = 16/481 (3%)

Query: 26  ISKLSIFQRSTIPTTLIPSWA--------SLVSSNPALSPKFQSFL-RCSTKPDTSANSE 76
           +  L  +      +TLI SW+        +LVSSN +L+ KFQSFL  CSTKPDT+ N++
Sbjct: 13  LPSLKPYNLKNPTSTLIQSWSCSHKPNTLTLVSSNHSLTTKFQSFLLHCSTKPDTNTNND 72

Query: 77  IHSEQNDEPSSVSNSQNQKASEPGEXXX-XXXXXXXXXXXXXXYACSRGLVFDLGPSNSW 135
            H++ N+EP+S+SN  ++++ +  E                    CSRGLVFDLG SNSW
Sbjct: 73  THNKNNNEPNSLSNKNHKESQQEEENEAFSSASSSLQSSSSTSSLCSRGLVFDLGFSNSW 132

Query: 136 DGAEIGSPVVKRFLSDEEERWYMWYHGRSEGDXXXXXXXXXXXXNGVHWERGGGPSRSSS 195
           D  +IGSPVVKRF SDEEERWYMWYHGR +G             NGVHWERGGGP++SSS
Sbjct: 133 DSEDIGSPVVKRFQSDEEERWYMWYHGRPKGKPSNDLIGLAISSNGVHWERGGGPAKSSS 192

Query: 196 DVGSVMNCGKDWWVFDTHGVRPSETVIMSSSRVRAPPGVYWLYYTGYSSETAEVTDHSME 255
           DVG VMNCGKDWW FDT G+RPS  +IMSS RVR    VYWLYYTGY SE+ E  DHS E
Sbjct: 193 DVGFVMNCGKDWWGFDTRGIRPSGLLIMSSYRVRGSNAVYWLYYTGYGSESVEFRDHSFE 252

Query: 256 FCLENPDRCLINDGVNQGECGKWNVLKSLPGLAISQDGRHWARIEGEHHSGALIDVGSEK 315
           F  +NP+      G+N    GK  +LKSLPGLAISQDGR+WARIEGEHHSGALIDVG EK
Sbjct: 253 FSFDNPN------GLNHENFGKGKILKSLPGLAISQDGRNWARIEGEHHSGALIDVGKEK 306

Query: 316 DWDSLFISSPHVVYHENGDLRMYYHSFDLEKGHFAVGIARSRDGVRWVKLGKVIGGGKTG 375
           DWDSLFISSP VVYH NGDLRMYYHSFD EKG F +GIARSRDG+RW+KLGK++GGGK G
Sbjct: 307 DWDSLFISSPQVVYHGNGDLRMYYHSFDKEKGEFCIGIARSRDGIRWLKLGKIMGGGKVG 366

Query: 376 SFDEFGAMNPCVMRNRFEWNYMMAYEGVAADGRRSIGMAISPNGLKEWVRLQDEAILEPS 435
           SFDE G MN CV RN+   NY+M YEGV ++GRR IG+A+SP+GL EWVR+QDEAIL PS
Sbjct: 367 SFDELGVMNACVTRNKSGGNYVMVYEGVGSNGRRCIGVAVSPDGLMEWVRVQDEAILMPS 426

Query: 436 DRGCWDDKDVGSPCLVQMDKEENELRLYYRGVGNEGRVGIGMAVSEGKDVRSFRRWTGFH 495
           D GCWDDKDVGSPC V MD EENE RLYYRGVGN GRVGIGMAVSEGKD+RSFRRWTGFH
Sbjct: 427 DEGCWDDKDVGSPCFVYMDNEENEWRLYYRGVGNGGRVGIGMAVSEGKDIRSFRRWTGFH 486

Query: 496 L 496
           +
Sbjct: 487 V 487