Miyakogusa Predicted Gene

Lj2g3v1277530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1277530.1 Non Characterized Hit- tr|H2MTB0|H2MTB0_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=C1orf35
,73.68,6e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
coiled-coil,NULL; MMtag,Kinase phosphoryla,CUFF.36652.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g042160.1 | kinase phosphorylation protein | HC | chr5:185...   258   4e-69

>Medtr5g042160.1 | kinase phosphorylation protein | HC |
           chr5:18552189-18546267 | 20130731
          Length = 229

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 136/171 (79%), Gaps = 2/171 (1%)

Query: 1   MYHPTRGGVRGGRDQFTWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLFWYARDKKSQTX 60
           MYHPTRGGVRGGRDQFTWDDVK DKHRENY+GHS+KAPVGRWQKGKDLFWY RDKKSQ  
Sbjct: 1   MYHPTRGGVRGGRDQFTWDDVKADKHRENYIGHSLKAPVGRWQKGKDLFWYTRDKKSQNE 60

Query: 61  XXXXXXXXXXXXXXXXXQAMREALGLAPKRANRPQGNRLDKHEFSELVKRGSTAEDLGAG 120
                            QAMREALGLAPKRA+RPQGNRLDKHEFSELVKRGSTAEDLG G
Sbjct: 61  EMEAAKEEIKRIKEEEEQAMREALGLAPKRASRPQGNRLDKHEFSELVKRGSTAEDLGEG 120

Query: 121 HAEAASVQGLGFAKAPQPWEEPGSSKLSLSGTPAVEENASVPNQSERKAED 171
           HAEAA VQG+GFA+  +PWEEPGSSK  +S TPA  EN  +P QS RK ED
Sbjct: 121 HAEAARVQGVGFARELRPWEEPGSSK--VSHTPAEVENVPMPIQSPRKTED 169