Miyakogusa Predicted Gene

Lj2g3v1266110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1266110.1 Non Characterized Hit- tr|K4ABX6|K4ABX6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si036383,45.13,3e-19,seg,NULL; Remorin_C,Remorin, C-terminal;
coiled-coil,NULL,CUFF.36615.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g043690.2 | carboxy-terminal region remorin | HC | chr5:19...   164   2e-41
Medtr5g043690.1 | carboxy-terminal region remorin | HC | chr5:19...   164   3e-41
Medtr4g082910.1 | carboxy-terminal region remorin | HC | chr4:32...   127   6e-30
Medtr3g023650.1 | carboxy-terminal region remorin | HC | chr3:71...    99   1e-21
Medtr5g043685.1 | carboxy-terminal region remorin | LC | chr5:19...    80   8e-16
Medtr8g080180.2 | carboxy-terminal region remorin | HC | chr8:34...    52   2e-07
Medtr8g080180.1 | carboxy-terminal region remorin | HC | chr8:34...    52   2e-07
Medtr1g052560.1 | carboxy-terminal region remorin | HC | chr1:21...    52   3e-07
Medtr8g097320.2 | carboxy-terminal region remorin | HC | chr8:40...    50   8e-07
Medtr8g097320.1 | carboxy-terminal region remorin | HC | chr8:40...    50   1e-06
Medtr1g019280.2 | carboxy-terminal region remorin | HC | chr1:57...    49   1e-06
Medtr1g019280.1 | carboxy-terminal region remorin | HC | chr1:57...    49   2e-06
Medtr1g100647.1 | carboxy-terminal region remorin | HC | chr1:45...    47   6e-06

>Medtr5g043690.2 | carboxy-terminal region remorin | HC |
           chr5:19203526-19201222 | 20130731
          Length = 313

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/160 (56%), Positives = 115/160 (71%), Gaps = 4/160 (2%)

Query: 1   MKRTST--GKRPETSAPKIXXXXXXXXXXXIRQASKKPGPVPKTPLRPSTQETKAD-EWE 57
           MK+TST  GK+  ++ P             IR+ S+KPGP+ +T    +  ET AD EWE
Sbjct: 155 MKKTSTFTGKKTNSTVPN-APPPPPPPPPPIRKTSEKPGPLRQTTTGSNNGETNADDEWE 213

Query: 58  RTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQNKMTNVDK 117
           RTEL+KI+QRYEKLK  IDSWE+KK+MKA+ KL+KQESE+ERRR KAL+ FQNKM  V+ 
Sbjct: 214 RTELEKIKQRYEKLKVLIDSWEDKKRMKAKRKLMKQESEIERRRLKALEKFQNKMKYVNL 273

Query: 118 IAEGARTKAVENRKNEELKTKEKANAIRTTGKLPGICFCF 157
           +A+GAR KA E+RKNEEL+ K K + IRTT KLP + FCF
Sbjct: 274 VADGARAKAEESRKNEELQAKGKGSTIRTTCKLPRMYFCF 313


>Medtr5g043690.1 | carboxy-terminal region remorin | HC |
           chr5:19203706-19201150 | 20130731
          Length = 312

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/160 (56%), Positives = 115/160 (71%), Gaps = 4/160 (2%)

Query: 1   MKRTST--GKRPETSAPKIXXXXXXXXXXXIRQASKKPGPVPKTPLRPSTQETKAD-EWE 57
           MK+TST  GK+  ++ P             IR+ S+KPGP+ +T    +  ET AD EWE
Sbjct: 154 MKKTSTFTGKKTNSTVPN-APPPPPPPPPPIRKTSEKPGPLRQTTTGSNNGETNADDEWE 212

Query: 58  RTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQNKMTNVDK 117
           RTEL+KI+QRYEKLK  IDSWE+KK+MKA+ KL+KQESE+ERRR KAL+ FQNKM  V+ 
Sbjct: 213 RTELEKIKQRYEKLKVLIDSWEDKKRMKAKRKLMKQESEIERRRLKALEKFQNKMKYVNL 272

Query: 118 IAEGARTKAVENRKNEELKTKEKANAIRTTGKLPGICFCF 157
           +A+GAR KA E+RKNEEL+ K K + IRTT KLP + FCF
Sbjct: 273 VADGARAKAEESRKNEELQAKGKGSTIRTTCKLPRMYFCF 312


>Medtr4g082910.1 | carboxy-terminal region remorin | HC |
           chr4:32232844-32230281 | 20130731
          Length = 356

 Score =  127 bits (318), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 92/130 (70%), Gaps = 5/130 (3%)

Query: 29  IRQASKKPGPVPKTPLRPSTQETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARH 88
           IRQ S    P      RPS  E KAD WER EL KI++RYEKL ETIDSWE +KKMKAR 
Sbjct: 231 IRQTSTAARPS----TRPSETEAKADAWEREELKKIKERYEKLLETIDSWEKRKKMKARR 286

Query: 89  KLVKQE-SELERRRFKALQSFQNKMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTT 147
           KL K E SE  R+R KA + +Q+K+  +D+IAEGAR ++ E RKNE LK K+KAN IRTT
Sbjct: 287 KLNKHEQSENTRKREKAWKKYQDKIKYIDEIAEGARAQSDERRKNETLKAKDKANIIRTT 346

Query: 148 GKLPGICFCF 157
           GKLPG C CF
Sbjct: 347 GKLPGACSCF 356


>Medtr3g023650.1 | carboxy-terminal region remorin | HC |
           chr3:7183246-7180922 | 20130731
          Length = 235

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 79/114 (69%)

Query: 44  LRPSTQETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFK 103
           L     + KA+ WE+ ++++I++RYEK+K  I SWE +K+++A+ ++ ++++EL+  R  
Sbjct: 119 LHNKNNKAKAEAWEKAKMERIQKRYEKMKSQILSWEGEKRVQAKQQMERKKNELDYTRAN 178

Query: 104 ALQSFQNKMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTGKLPGICFCF 157
           A++ ++ K+  +D I + A  +  +NR+ EELK KEKAN IR TGK+P  CFCF
Sbjct: 179 AIEHYKRKIARIDMIGQRAIKELEDNRRKEELKVKEKANKIRKTGKVPVTCFCF 232


>Medtr5g043685.1 | carboxy-terminal region remorin | LC |
           chr5:19199685-19197212 | 20130731
          Length = 289

 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 8/99 (8%)

Query: 33  SKKPGPVPKTPLRPSTQETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVK 92
           ++KP P  +T    +  ET  ++ ERTE DKI QRYEK KE IDSWE+KKK+KA+ +L+K
Sbjct: 124 ARKPDPQRETTTGSNNGET--NKQERTEPDKINQRYEKSKELIDSWEDKKKIKAKRELMK 181

Query: 93  QESELERRRFKALQSFQNKMTNVDKIAEGARTKAVENRK 131
           Q+SELER R K+L+ +      V+ +A+GA  KA E+RK
Sbjct: 182 QQSELERGRKKSLEKY------VNLVADGAIAKAEESRK 214


>Medtr8g080180.2 | carboxy-terminal region remorin | HC |
           chr8:34442403-34445750 | 20130731
          Length = 361

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 50  ETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQ 109
           E++A  W+  E  K   R+++ +  I +WEN +  KA  ++ K E + ER +  A +   
Sbjct: 246 ESRAMAWDEAERAKYMARFKREEMKIQAWENHQIRKAEMEMKKMEVKAERMKAMAQEKLT 305

Query: 110 NKMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTG----------KLPGICF 155
           NK+    +IAE  R  A     +  L+T E+ + IR TG          KLP IC+
Sbjct: 306 NKLAATRRIAEEKRANAQVKLNDNALRTTERVDYIRRTGHVPSSFSFTFKLPSICW 361


>Medtr8g080180.1 | carboxy-terminal region remorin | HC |
           chr8:34442437-34445750 | 20130731
          Length = 361

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 50  ETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQ 109
           E++A  W+  E  K   R+++ +  I +WEN +  KA  ++ K E + ER +  A +   
Sbjct: 246 ESRAMAWDEAERAKYMARFKREEMKIQAWENHQIRKAEMEMKKMEVKAERMKAMAQEKLT 305

Query: 110 NKMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTG----------KLPGICF 155
           NK+    +IAE  R  A     +  L+T E+ + IR TG          KLP IC+
Sbjct: 306 NKLAATRRIAEEKRANAQVKLNDNALRTTERVDYIRRTGHVPSSFSFTFKLPSICW 361


>Medtr1g052560.1 | carboxy-terminal region remorin | HC |
           chr1:21429641-21426963 | 20130731
          Length = 273

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query: 50  ETKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQ 109
           E+K   W+  ++ K+  R+++    I+ WEN++  KA   ++K E +LE +R KAL+  Q
Sbjct: 166 ESKIAAWQNAKVAKVNNRFKREDAVINGWENEQVQKANSWMMKVERKLEEKRAKALEKMQ 225

Query: 110 NKMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTGKLPG 152
           N +    + A+  R  A   R  +  +  E AN +R  G+ P 
Sbjct: 226 NDVAKAHRKAQEKRASAEAKRGTKISRVLEIANLMRVVGRAPS 268


>Medtr8g097320.2 | carboxy-terminal region remorin | HC |
           chr8:40772237-40769635 | 20130731
          Length = 208

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 56  WERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQNKMTNV 115
           WE  E  K+  R  K++  +D WE+ KK     K    E +L+R++ + ++  QNK+  +
Sbjct: 99  WEENEKTKVENRAYKMQSAVDLWEDDKKASIEAKFKGIEVKLDRKKSEYVEVMQNKIGEI 158

Query: 116 DKIAEGARTKAVENRKNEE-LKTKEKANAIRTTGKLP-GICFCF 157
            K AE  +   +E +K EE LK +E A   RT G  P  +  CF
Sbjct: 159 HKSAE-EKKAMIEAQKGEEILKVEETAAKFRTRGYQPRRLLGCF 201


>Medtr8g097320.1 | carboxy-terminal region remorin | HC |
           chr8:40772400-40769635 | 20130731
          Length = 205

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 56  WERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQNKMTNV 115
           WE  E  K+  R  K++  +D WE+ KK     K    E +L+R++ + ++  QNK+  +
Sbjct: 96  WEENEKTKVENRAYKMQSAVDLWEDDKKASIEAKFKGIEVKLDRKKSEYVEVMQNKIGEI 155

Query: 116 DKIAEGARTKAVENRKNEE-LKTKEKANAIRTTGKLP-GICFCF 157
            K AE  +   +E +K EE LK +E A   RT G  P  +  CF
Sbjct: 156 HKSAE-EKKAMIEAQKGEEILKVEETAAKFRTRGYQPRRLLGCF 198


>Medtr1g019280.2 | carboxy-terminal region remorin | HC |
           chr1:5781751-5777571 | 20130731
          Length = 558

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%)

Query: 51  TKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQN 110
           T++  WE +E  K   + ++ +  I +WEN +K KA   + K E +LE++R  ++    N
Sbjct: 447 TRSSSWEISERSKTVSKAKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRASSMDKIMN 506

Query: 111 KMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTGKLPGICFCF 157
           K+    K A+  R+    ++ ++  +T  K  + R  G++  +  CF
Sbjct: 507 KLKFAQKKAQEMRSSVSVDQAHQVARTSHKVMSFRRAGQMGSLSGCF 553


>Medtr1g019280.1 | carboxy-terminal region remorin | HC |
           chr1:5782200-5777571 | 20130731
          Length = 620

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%)

Query: 51  TKADEWERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQN 110
           T++  WE +E  K   + ++ +  I +WEN +K KA   + K E +LE++R  ++    N
Sbjct: 509 TRSSSWEISERSKTVSKAKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRASSMDKIMN 568

Query: 111 KMTNVDKIAEGARTKAVENRKNEELKTKEKANAIRTTGKLPGICFCF 157
           K+    K A+  R+    ++ ++  +T  K  + R  G++  +  CF
Sbjct: 569 KLKFAQKKAQEMRSSVSVDQAHQVARTSHKVMSFRRAGQMGSLSGCF 615


>Medtr1g100647.1 | carboxy-terminal region remorin | HC |
           chr1:45590830-45593341 | 20130731
          Length = 209

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 56  WERTELDKIRQRYEKLKETIDSWENKKKMKARHKLVKQESELERRRFKALQSFQNKMTNV 115
           WE +E  K   + ++   TI +WEN KK     +L K E +LE+++ +  +  +NK+  +
Sbjct: 107 WEESEKSKAENKAQRRLSTITAWENSKKAAKEAELRKLEEQLEKKKGEYAEKLKNKIAAL 166

Query: 116 DKIAEGARTKAVENRKNEE-LKTKEKANAIRTTGKLPGICFCF 157
            K AE  +   +E +K E+ LK +E A   R TG  P   F  
Sbjct: 167 HKAAEEKKA-MIEAKKGEDLLKAEEIAAKYRATGTAPKKLFGL 208