Miyakogusa Predicted Gene
- Lj2g3v1254030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1254030.1 tr|Q9FZE3|Q9FZE3_ARATH C2H2-like zinc finger
protein OS=Arabidopsis thaliana GN=T1K7.4 PE=2
SV=1,32.61,3e-18,seg,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zinc finger,Zi,CUFF.36601.1
(518 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g043930.1 | C2H2-type zinc finger protein | HC | chr5:1930... 418 e-117
Medtr4g082980.1 | C2H2-type zinc finger protein | HC | chr4:3226... 219 4e-57
Medtr4g109340.1 | C2H2-type zinc finger protein | HC | chr4:4540... 172 5e-43
Medtr3g023760.1 | C2H2-type zinc finger protein | HC | chr3:7235... 84 3e-16
Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC ... 69 1e-11
Medtr4g100860.1 | C2H2-type zinc-finger protein, putative | HC |... 55 2e-07
Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | H... 49 9e-06
>Medtr5g043930.1 | C2H2-type zinc finger protein | HC |
chr5:19301858-19300119 | 20130731
Length = 514
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/558 (49%), Positives = 331/558 (59%), Gaps = 84/558 (15%)
Query: 1 MEERKFVCKYCSKRFPCGKSLGGHIRTHMMSEHSAQANEASAERRSNA-----AMLKLDA 55
ME+R VCKYC KRFPCGKSLGGHIRTHMMSE+S Q+NE E+R NA AM K D
Sbjct: 1 MEDR--VCKYCLKRFPCGKSLGGHIRTHMMSENSLQSNE---EKRMNANASVNAMFKFDE 55
Query: 56 AERKRKRESXXXXXXXXXXXXXXXXXXXXXXXNLMYGLRENPKKTTRFVHSNATSS-QME 114
RKRKR NL+YGLRENPKKTTRFVHSNA ++ QME
Sbjct: 56 G-RKRKR----------LDLGSNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQME 104
Query: 115 KFCKECGKGFPSLKALCGHMACHSEKDRGTN-------LSEKQKLVMDTQSDTETSGPTH 167
KFCKECGKGFPSLKALCGHMACHSEKD+G N + EKQKLVMD+QSDTE S T
Sbjct: 105 KFCKECGKGFPSLKALCGHMACHSEKDKGANRIESVSGVREKQKLVMDSQSDTEASVQTD 164
Query: 168 PRRSKRMRXXXXXXXXXXXXLTNHHPXXXXXXXXXXXXXXXXXXXXXARCLMMLSKDSSY 227
RRS+RM+ ++ ARCLM+LS+DS+Y
Sbjct: 165 SRRSRRMKFKNLSGGGGDNKSSS---SLHWGNCSSSVSEVEQEQEDVARCLMLLSRDSTY 221
Query: 228 KGRFALVTDSSDNNSVVLEAKSPSV-----TFNFGKNFV---SNAYELVEQKKKVHKDTK 279
KGRF LVT+SSDNNSVV+E KSPSV N GKN V +N +EL E KK++KD K
Sbjct: 222 KGRFPLVTESSDNNSVVVEEKSPSVDTKFAVMNRGKNIVGAKNNGFELAE--KKLNKDGK 279
Query: 280 LKSSAEIGYDSDNSDSGYFRYGPKKVDSDEESSDGFFRNEVKSSKVGYLSGFDGYDVESR 339
+KS EIGY SDNSDSGYF YGPKKV+SD+ SSDGFFRN+ KSSKVGY S F +D ES
Sbjct: 280 MKS-VEIGYVSDNSDSGYFTYGPKKVESDD-SSDGFFRNDAKSSKVGYFSSFQDHDFES- 336
Query: 340 KMMMLSRGSKKLVLEDLDNEHSKFGSRKRLTYDSVGQKTEALDHXXXXXXXXNHGLFTNE 399
SKK++ + ++F K++ ++ +KT+ N+ ++ +
Sbjct: 337 --------SKKIISRGRNRNSAEF---KKVVLENSSKKTK---------NGYNNEVYESL 376
Query: 400 RDNNGSGSEDSAYESDENSTDSDSYPATKPHKNLNVXXXXXXXXXXXXXXXXXX----EH 455
+ + S SEDSAYESDENS++SDSYPA K N N+ EH
Sbjct: 377 KIDRESYSEDSAYESDENSSESDSYPAPKAQSNKNMNGKTNKKSSYKGKKKMKSKKSKEH 436
Query: 456 ECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXX---------- 505
ECPICNKIF+SGQALGGHKRSHF+GG+++NTLVIRP
Sbjct: 437 ECPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPPAFA 496
Query: 506 -----CLIDLNLPAPVDE 518
L DLNLPAP DE
Sbjct: 497 AAANPSLFDLNLPAPDDE 514
>Medtr4g082980.1 | C2H2-type zinc finger protein | HC |
chr4:32267388-32265780 | 20130731
Length = 450
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 250/549 (45%), Gaps = 130/549 (23%)
Query: 1 MEE--RKFVCKYCSKRFPCGKSLGGHIRTHMMSEHSAQANEASAERRSNAAMLKLDAAER 58
MEE RKFVCKYC KRFPCGKSLGGHIRTHM E
Sbjct: 1 MEEKHRKFVCKYCFKRFPCGKSLGGHIRTHMTEE-------------------------- 34
Query: 59 KRKRESXXXXXXXXXXXXXXXXXXXXXXXNLMYGLRENPKKTTRFVHSNAT--------- 109
R + NL+YGLRENPKKT RFVHS+
Sbjct: 35 ---RNNAAAIAAAGGDAAEHVAAGVGDGGNLIYGLRENPKKTMRFVHSHHHHYNHHAATA 91
Query: 110 ------SSQMEKFCKECGKGFPSLKALCGHMACHSEKDRGTNLSEKQKLVMDTQSDTETS 163
++M KFCKECGKGFPSLKALCGHMA HSEK++ N + ++ +D +
Sbjct: 92 AATTLEQNEMIKFCKECGKGFPSLKALCGHMASHSEKEKKINKAMMEEDTQSDDTDDDDD 151
Query: 164 GPTHPRRSKRMRXXXXXXXXXXXXLTNHHPXXXXXXXXXXXXXXXXXXXXXARCLMMLSK 223
+ +R L+N P +
Sbjct: 152 DVCVAATTMNLRKSKRRIRFKSITLSNQQPSSSSVNGGSSSVSEM-------------EQ 198
Query: 224 DSSYKGRFALVTDSSDNNS-VVLEAKSPSVTFNFGKNFVSN-AYELVEQKKKVHKDTKLK 281
+ +GRF V++SSDNN+ +VLE KS V N G FV+N A E V +KKK KLK
Sbjct: 199 EQQEEGRF--VSESSDNNNEIVLETKSKIVIRN-GNKFVANHAREFVAEKKK-----KLK 250
Query: 282 SSAEIGYDSDNSDSGYFRYGPKKVDSDEESSDG--FFRNEVKSSKVGYLSGFDGYDVESR 339
IG S+NSD FRYG KK+ + S F R +V++ K SGFD D S+
Sbjct: 251 MVG-IGV-SNNSDLRDFRYGSKKIKFVDSSVPNYEFKRPKVEADK----SGFD--DCRSK 302
Query: 340 KMMMLSRGSKK--LVLEDLDNEHSKFGSRKR---LTYDSVGQKTEALDHXXXXXXXXNHG 394
++ KK ++ +DLD++ +KF SRK+ ++YDS
Sbjct: 303 YNNNVTTIFKKSGMMNKDLDHD-TKFDSRKKDNDISYDST-------------------- 341
Query: 395 LFTNERDNNGSGSEDSAYESDENSTDSDSYPATKPHKNLNVXXXXXXXXXXXXXXXXXX- 453
+ENS++SDS+PA K H + V
Sbjct: 342 --------------TDVESDEENSSESDSFPAAKSHNSKAVNRKKLSSSNKGKKKKKLKS 387
Query: 454 ----EHECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLID 509
E+ECPIC KIFRSGQALGGHKRSHFVGGSEENT VI+ CLID
Sbjct: 388 KKSKEYECPICYKIFRSGQALGGHKRSHFVGGSEENTFVIKQA------AAAVAVPCLID 441
Query: 510 LNLPAPVDE 518
LNLPAPVDE
Sbjct: 442 LNLPAPVDE 450
>Medtr4g109340.1 | C2H2-type zinc finger protein | HC |
chr4:45405757-45403067 | 20130731
Length = 516
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 230/564 (40%), Gaps = 125/564 (22%)
Query: 1 MEERKFVCKYCSKRFPCGKSLGGHIRTHMMSEHSAQANEASAERRSNAAMLKLDAAERKR 60
++E K CK+CSK FPCG+SLGGH+R+H+ N SAE+ AE K
Sbjct: 6 IQEFKHACKFCSKSFPCGRSLGGHMRSHI--------NNLSAEK-----------AEHKE 46
Query: 61 KRESXXXXXXXXXXXXXXXXXXXXXXXNLMYGLRENPKKTTR--FVHSNATSSQMEKFCK 118
K+ N YGLRENPKKT R S+ S +KFCK
Sbjct: 47 KQ--------LIFSTKKNDSIGSEAATNGSYGLRENPKKTWRKRIADSSEDSYVYDKFCK 98
Query: 119 ECGKGFPSLKALCGHMACHSEKDRGTNLSEKQKLVM----DTQSDTETSGPTHPRRSKRM 174
ECGK F S +AL GHM CHSEK+R +N E Q D QSD E + P +RSKR
Sbjct: 99 ECGKCFHSWQALFGHMKCHSEKERVSNSLEDQDSWTNDAKDVQSDNEITAPNRKKRSKRT 158
Query: 175 RXXXXXXXXXXXXLTNHHPXXXXXXXXXXXXXXXXXXXXXARCLMMLSKD-SSYKGRFAL 233
R + A L+MLS+D S + G L
Sbjct: 159 R--------------TRYNMVATATASSSVSEVEHEQEEVAMSLIMLSRDVSPWSGLHYL 204
Query: 234 VTDSSDNNSVVLEAKSPSVTFNFGKNFVSNAYELVEQKKKVHKDTKLKSSAEIGYDSDNS 293
+SSDNNSV EA+S SV N F +N +L++Q S Y+ NS
Sbjct: 205 AAESSDNNSVYFEARS-SVRTNLVTKFDANIAKLMKQ------------SENKKYELGNS 251
Query: 294 DSGYFRYGPKKVDS-DEE----------SSDGFFRNEVKSSKVGYLSGFDGYDVESRKMM 342
S F++ K ++ D E S GF ++ S++ YLS + +VE+ K
Sbjct: 252 VSKNFKFKGKSLEILDTEKGFKMIKTGVSIKGFLKS--TKSELDYLSTLEDSEVENGKSR 309
Query: 343 ------MLSRGSKKLVLEDLDNEH--------SKFGSRKRL---TYDSVGQKTEALDHXX 385
+LS+ + + ++N H F R + T + + +AL
Sbjct: 310 VNGTESVLSKSA--TIRSSVNNPHHDHEDEFIKNFNKRGKFECTTCNKIFHSYQALG-GH 366
Query: 386 XXXXXXNHGLFTNERDNNGSGSEDSAYESDENS----TDSDSYPATKPHKNLN------- 434
N G F S ES ENS TD + T K +
Sbjct: 367 RASHKKNKGCFA------------SKIESSENSIEFETDLSHHEPTTESKLMKISDNIEY 414
Query: 435 VXXXXXXXXXXXXXXXXXXEHECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXX 494
V HECPIC K+F+SGQALGGHKRSH V E+ +V+
Sbjct: 415 VQNMGERETVRDSKKKIKGHHECPICFKVFQSGQALGGHKRSHIVATGSESRVVLEEQVP 474
Query: 495 XXXXXXXXXXXCLIDLNLPAPVDE 518
+DLNLPA +E
Sbjct: 475 QIRD--------FLDLNLPAATEE 490
>Medtr3g023760.1 | C2H2-type zinc finger protein | HC |
chr3:7235345-7233398 | 20130731
Length = 468
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 71/146 (48%), Gaps = 40/146 (27%)
Query: 5 KFVCKYCSKRFPCGKSLGGHIRTHMMSEHSAQANEASAERRSNAAMLKLDAAERKRKRES 64
K VCK+C K F GKSLGGH+R+H ++ + AA R+ K+E
Sbjct: 11 KHVCKFCRKSFASGKSLGGHMRSHDHDHDDDYDDDHDDDGDEYVV-----AARRRMKKEE 65
Query: 65 XXXXXXXXXXXXXXXXXXXXXXXNLMYGLRENPKKTTRFVHSNATSSQ---------MEK 115
YGLRENPKKT R V +++T+ Q ++K
Sbjct: 66 G-------------------------YGLRENPKKTWR-VLTDSTNEQEIQDPFDVVLDK 99
Query: 116 FCKECGKGFPSLKALCGHMACHSEKD 141
CKECGKGF S+KAL GHM CH +K+
Sbjct: 100 LCKECGKGFQSMKALFGHMKCHKKKN 125
>Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC |
scaffold0160:20867-19377 | 20130731
Length = 361
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 455 HECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPA 514
HECP+C ++F SGQALGGHKR+H + GS T+ I +IDLNLPA
Sbjct: 286 HECPVCFRVFNSGQALGGHKRTHVIHGSSSTTVPI--------FSSKRVTKSVIDLNLPA 337
Query: 515 PVDE 518
P+D+
Sbjct: 338 PIDD 341
>Medtr4g100860.1 | C2H2-type zinc-finger protein, putative | HC |
chr4:41629470-41630850 | 20130731
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 456 ECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGXXXXXXXXXXXXXCLIDLNLPAP 515
ECP C K+F SGQALGGHKRSH + S + IDLN+PAP
Sbjct: 247 ECPFCFKVFGSGQALGGHKRSHLMIPSSSTST----ANVNVNPTAARFKDSFIDLNMPAP 302
Query: 516 VDE 518
++E
Sbjct: 303 LEE 305
>Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | HC |
chr4:9546941-9545698 | 20130731
Length = 378
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 455 HECPICNKIFRSGQALGGHKRSHFVG---------GSEENTLVIRPGXXXXXXXXXXXXX 505
HECPIC + F SGQALGGH+R+H +G + T+V R
Sbjct: 278 HECPICFREFASGQALGGHRRTHNIGFGSASASTSAAAITTMVRR--NVKVARVSANVGD 335
Query: 506 CLIDLNLPAPV 516
L+DLN PAP+
Sbjct: 336 SLLDLNFPAPM 346