Miyakogusa Predicted Gene

Lj2g3v1252800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1252800.1 Non Characterized Hit- tr|B4FWU8|B4FWU8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=2,65.57,0.000000000000001,Eaf7,Chromatin modification-related
protein EAF7; seg,NULL; MRG-BINDING PROTEIN,Chromatin
modificati,CUFF.36588.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g044200.1 | chromatin modification-related protein Eaf7 | ...   168   9e-43
Medtr6g053980.1 | chromatin modification-related protein Eaf7 | ...   126   5e-30

>Medtr5g044200.1 | chromatin modification-related protein Eaf7 | HC
           | chr5:19428800-19431485 | 20130731
          Length = 131

 Score =  168 bits (426), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 97/121 (80%)

Query: 2   SSGGGAGKPKEEEQDGMSVHSPCKPHPSSASSLPKDXXXXXXXXXXXXXXXIYPPMKLQG 61
           S+G  A KPKEEEQDGMSVHSPCKP PSSASSL KD               IYPP+KLQG
Sbjct: 4   SNGKEAVKPKEEEQDGMSVHSPCKPPPSSASSLNKDIDQVELELRLLEALEIYPPLKLQG 63

Query: 62  IHRHFVLYGLMDFLRRRFDRHFSSEEVLQLLDRFYNLEMLKTDDEEIESLNHEEDFCLPE 121
           +HRHFVLYGLM++L+R FDRHF+++EVL+LL RFYN+EMLK+DD+EI+ LN+EEDF LP+
Sbjct: 64  VHRHFVLYGLMEYLKRSFDRHFTADEVLELLGRFYNIEMLKSDDDEIDVLNNEEDFSLPQ 123

Query: 122 S 122
           S
Sbjct: 124 S 124


>Medtr6g053980.1 | chromatin modification-related protein Eaf7 | HC
           | chr6:19492807-19491578 | 20130731
          Length = 130

 Score =  126 bits (316), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 90/120 (75%), Gaps = 1/120 (0%)

Query: 3   SGGGAGKPKEEEQDGMSVHSPCKPHPSSASSLPKDXXXXXXXXXXXXXXXIYPPMKLQGI 62
            G    KPK  EQDG SVHSPCKP PSS+SSL KD                YPP+KLQG+
Sbjct: 5   KGKEVVKPKVAEQDGTSVHSPCKPPPSSSSSL-KDLDQVELELQLLLAFEFYPPIKLQGV 63

Query: 63  HRHFVLYGLMDFLRRRFDRHFSSEEVLQLLDRFYNLEMLKTDDEEIESLNHEEDFCLPES 122
           HRHFVLYGLM++L+R FDRHF++EEVL+L+ RFYN+EMLK+DD+EI+ LN+EEDF LP+S
Sbjct: 64  HRHFVLYGLMEYLKRSFDRHFTAEEVLELVGRFYNIEMLKSDDDEIDELNNEEDFRLPQS 123