Miyakogusa Predicted Gene
- Lj2g3v1252520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1252520.1 Non Characterized Hit- tr|F6HCQ5|F6HCQ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.86,1e-18,DUF1675,Protein of unknown function DUF1675;
coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; F,CUFF.36567.1
(381 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g045370.1 | ninja-family protein AFP1 | HC | chr5:19912802... 373 e-103
Medtr7g013820.1 | ABI five-binding protein | HC | chr7:4066303-4... 132 4e-31
Medtr8g012620.1 | ninja-family protein AFP1 | LC | chr8:3688274-... 99 6e-21
Medtr3g025970.1 | ninja-family protein AFP1 | HC | chr3:7931894-... 98 2e-20
Medtr6g087140.5 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
Medtr6g087140.4 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
Medtr6g087140.1 | ninja-family protein mc410 | HC | chr6:3350494... 52 7e-07
Medtr6g087140.13 | ninja-family protein mc410 | HC | chr6:335049... 52 7e-07
Medtr6g087140.11 | ninja-family protein mc410 | HC | chr6:335048... 52 7e-07
Medtr6g087140.12 | ninja-family protein mc410 | HC | chr6:335048... 52 7e-07
Medtr6g087140.7 | ninja-family protein mc410 | HC | chr6:3350491... 52 7e-07
Medtr6g087140.10 | ninja-family protein mc410 | HC | chr6:335048... 52 7e-07
Medtr6g087140.8 | ninja-family protein mc410 | HC | chr6:3350494... 52 7e-07
Medtr6g087140.9 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
Medtr6g087140.3 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
Medtr6g087140.2 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
Medtr6g087140.6 | ninja-family protein mc410 | HC | chr6:3350485... 52 7e-07
>Medtr5g045370.1 | ninja-family protein AFP1 | HC |
chr5:19912802-19918237 | 20130731
Length = 570
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/398 (54%), Positives = 241/398 (60%), Gaps = 26/398 (6%)
Query: 3 MEKDPRDLLQRFLVSSGGSEKIDNRXXXXXXXXXXXXXXXXXXXXXXXXXXX-------- 54
M+K PRDLL+RF VS+ + I
Sbjct: 1 MDKYPRDLLERFFVSTTTTTTITQTQQIQNTQHHQHQYRQYLRENQEEEDEEEEEDEGIE 60
Query: 55 -----SLGGRFGVDKHAKNQHLVRSSSVVGTMPLLREDSEEA------SPAYSTLVRSSS 103
SLGGRFGVDKHA N+ L RSSSVVGTMPLLRED A +PAY TL+RSSS
Sbjct: 61 LNLGLSLGGRFGVDKHANNKKLTRSSSVVGTMPLLREDIAAAAGVASPTPAYPTLIRSSS 120
Query: 104 LPSETEEEWRKRKKLQTLRRMEAKRRRSEKQRGSKSERDXXXXXXXXXXXXXXXXXXXXA 163
LP+ETEEEWRKRK+LQTLRRMEAKRRRSEKQR SKS++D
Sbjct: 121 LPTETEEEWRKRKELQTLRRMEAKRRRSEKQRVSKSDKDSTSTAAGATGGGGSEEIEGSG 180
Query: 164 ITMGLNRLSSSTATPPPFGLPSWGVAXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXX 223
+TMGLNR S+ A PPPF +W A
Sbjct: 181 VTMGLNR-STVGAAPPPF---NWANATTKQVVLGDVLGKGKIGVGFQGLFTQPSSQGSVD 236
Query: 224 XXXXXXXXXXEMDSKPVLGSSSCGEARSPASTQSLQERSNQDAMRSSG-PKTEENKIRS- 281
EMDSKP LGSSSCGE RSPAS QSLQERS+QDA+ SSG PKT EN R+
Sbjct: 237 SQGGSSSSLSEMDSKPFLGSSSCGEIRSPASNQSLQERSSQDAVGSSGGPKTNENLTRTT 296
Query: 282 SRAEV-ENLCKKPNPSQNMGRDFGTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVR 340
SR EV EN K+P +QN+G++ GTN +EDMPCVFTKGDGPNG+RIEGILYKYGKGEEVR
Sbjct: 297 SRTEVMENASKRPYQTQNIGKEIGTNSVEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVR 356
Query: 341 IMCVCHGNFLSPAEFVKHAGGGDVAHPLRQIVVNPSGA 378
IMCVCHGNFLSPAEFVKHAGGGDVAHPLR IVVNPS
Sbjct: 357 IMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAT 394
>Medtr7g013820.1 | ABI five-binding protein | HC |
chr7:4066303-4062111 | 20130731
Length = 362
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 297 QNMGRDFGTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFV 356
QN +DF N EDMP V TKG+GPNGK++EG LYKYGKGEEVRI+CVCHG+FL+PAEFV
Sbjct: 282 QNKTKDF-KNLFEDMPSVTTKGEGPNGKKVEGFLYKYGKGEEVRILCVCHGSFLTPAEFV 340
Query: 357 KHAGGGDVAHPLRQIVVNPS 376
KHAGGGDV +PL+ IVVN S
Sbjct: 341 KHAGGGDVTNPLKHIVVNSS 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 55 SLGGRFGVDKHAKNQHLVRSSSV--------VGTMPLLREDSEEASPAYSTLVRSSSLPS 106
S+ GRFG D + K + R++S+ VG +S L+R+ SLP
Sbjct: 83 SMNGRFGFDPNTKK--IKRTTSIPESMIPVTVGGGSSSGGSGGGSSGGGGGLMRTCSLPV 140
Query: 107 ETEEEWRKRKKLQTLRRMEAKRRRSEKQRGSKSERD 142
E EEEWRKRK+LQ+ RRMEA+++R EKQR S++ R+
Sbjct: 141 ENEEEWRKRKELQSQRRMEARKKRYEKQRNSRAMRE 176
>Medtr8g012620.1 | ninja-family protein AFP1 | LC |
chr8:3688274-3689856 | 20130731
Length = 296
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 51/70 (72%)
Query: 308 MEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHP 367
+ MP V TKG+G NGK + G LY+Y K +EV I+CVCHG+ SPAEFV+HAGG D+ HP
Sbjct: 225 LPQMPYVSTKGNGSNGKVVNGFLYRYSKCDEVSIVCVCHGSTFSPAEFVQHAGGTDITHP 284
Query: 368 LRQIVVNPSG 377
LR I VN S
Sbjct: 285 LRHITVNSSA 294
>Medtr3g025970.1 | ninja-family protein AFP1 | HC |
chr3:7931894-7928987 | 20130731
Length = 219
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 308 MEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHP 367
+ MP V T GDGPNGKRIEG LYKY GE V I+CVCHG+FL+P EFV HAGG +VA+P
Sbjct: 150 LRQMPTVTTTGDGPNGKRIEGFLYKYRSGE-VCIVCVCHGSFLTPKEFVMHAGGKEVANP 208
Query: 368 LRQIVVNP 375
++ I V P
Sbjct: 209 MKHITVYP 216
>Medtr6g087140.5 | ninja-family protein mc410 | HC |
chr6:33504851-33508559 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.4 | ninja-family protein mc410 | HC |
chr6:33504851-33508591 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.1 | ninja-family protein mc410 | HC |
chr6:33504943-33508312 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.13 | ninja-family protein mc410 | HC |
chr6:33504916-33508312 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.11 | ninja-family protein mc410 | HC |
chr6:33504851-33508591 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.12 | ninja-family protein mc410 | HC |
chr6:33504851-33508523 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.7 | ninja-family protein mc410 | HC |
chr6:33504916-33508312 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.10 | ninja-family protein mc410 | HC |
chr6:33504851-33508523 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.8 | ninja-family protein mc410 | HC |
chr6:33504943-33508312 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.9 | ninja-family protein mc410 | HC |
chr6:33504851-33508591 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.3 | ninja-family protein mc410 | HC |
chr6:33504851-33508591 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.2 | ninja-family protein mc410 | HC |
chr6:33504851-33508559 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460
>Medtr6g087140.6 | ninja-family protein mc410 | HC |
chr6:33504851-33508559 | 20130731
Length = 487
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 304 GTNPMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 359
G+ ++P V T NG+ I G+ Y+Y ++RI+C CHG+ ++P +FV+HA
Sbjct: 408 GSGSYPNLPWVSTTSS--NGRTISGVTYRYNT-NQIRIVCACHGSHMTPEDFVRHA 460