Miyakogusa Predicted Gene

Lj2g3v1242380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1242380.1 Non Characterized Hit- tr|F6I1P6|F6I1P6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.71,2e-19,DUF2828,Domain of unknown function DUF2828; FAMILY NOT
NAMED,NULL,CUFF.36557.1
         (49 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g445440.1 | plant/T31B5-30 protein | HC | chr6:15836174-15...   101   2e-22
Medtr3g103410.1 | plant/MWF20 protein | HC | chr3:47713934-47711...    96   5e-21
Medtr5g045160.1 | plant/T31B5-30 protein | HC | chr5:19797004-19...    95   1e-20

>Medtr6g445440.1 | plant/T31B5-30 protein | HC |
           chr6:15836174-15834149 | 20130731
          Length = 636

 Score =  101 bits (251), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/49 (85%), Positives = 47/49 (95%)

Query: 1   MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
           MGFTEN SPTFLS+GNPCLDFFFHVVPDTP +TL++RL+LAWSHNPLTT
Sbjct: 58  MGFTENMSPTFLSTGNPCLDFFFHVVPDTPSETLVERLKLAWSHNPLTT 106


>Medtr3g103410.1 | plant/MWF20 protein | HC |
          chr3:47713934-47711611 | 20130731
          Length = 707

 Score = 96.3 bits (238), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/49 (79%), Positives = 46/49 (93%)

Query: 1  MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLTT 49
          M  TEN SPT+L++GNPCLDFFFHVVPDTPP+TL++RLQLAWS+NPLTT
Sbjct: 44 MTLTENMSPTYLTTGNPCLDFFFHVVPDTPPETLLRRLQLAWSYNPLTT 92


>Medtr5g045160.1 | plant/T31B5-30 protein | HC |
           chr5:19797004-19794564 | 20130731
          Length = 664

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query: 1   MGFTENNSPTFLSSGNPCLDFFFHVVPDTPPQTLIQRLQLAWSHNPLT 48
           MG TEN SPTFLS+GNPCLDFFFHVVPDTP +TL++RL+LAWS NPLT
Sbjct: 63  MGLTENMSPTFLSTGNPCLDFFFHVVPDTPSETLVERLKLAWSQNPLT 110