Miyakogusa Predicted Gene
- Lj2g3v1238830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1238830.1 Non Characterized Hit- tr|I1J641|I1J641_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20587 PE,77.46,0,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
SUBFAMILY NOT NAMED,NULL; FAM,CUFF.36535.1
(1109 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g046240.1 | RPAP1-like, carboxy-terminal protein | HC | ch... 1627 0.0
Medtr1g031840.1 | hypothetical protein | HC | chr1:11190985-1118... 763 0.0
Medtr1g031850.1 | hypothetical protein | HC | chr1:11194196-1119... 103 1e-21
Medtr2g060580.1 | hypothetical protein | HC | chr2:25705891-2570... 100 6e-21
Medtr2g060610.1 | hypothetical protein | LC | chr2:25709152-2570... 88 5e-17
Medtr2g060590.1 | hypothetical protein | HC | chr2:25706545-2570... 79 2e-14
Medtr2g060600.1 | hypothetical protein | LC | chr2:25707297-2570... 78 6e-14
Medtr2g060565.1 | hypothetical protein | LC | chr2:25700530-2570... 72 3e-12
>Medtr5g046240.1 | RPAP1-like, carboxy-terminal protein | HC |
chr5:20281096-20271961 | 20130731
Length = 1479
Score = 1627 bits (4213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 812/1122 (72%), Positives = 904/1122 (80%), Gaps = 20/1122 (1%)
Query: 1 MTKSEDKVDKSVDWKAVWAFALGPEPELVLALRI----CLDDNHNSVVLACAKVVQCALS 56
MTK +KVDKSVDW+AVW +ALGP+PEL L+LR+ C+ + + L C VVQ ALS
Sbjct: 365 MTKKGNKVDKSVDWEAVWTYALGPQPELALSLRVRAQKCIKEA--ASFLTC-HVVQSALS 421
Query: 57 CDVNENYFDISETIATCDKDIYTAPVFRSRPDTAAGFLPGGFWKYSAKPSNILPFNEDSM 116
CDVNENYFDISE +AT DKDI TAPVFRSRPD + GFL GG+WKYSAKPSNI PF+EDSM
Sbjct: 422 CDVNENYFDISENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSM 481
Query: 117 DDETEGKHTIQDDVVVAGQDFTAGLVRMGILPRLRYLLETDPSAALEECVISILIAIVRH 176
D+E++ KHTIQDDV VAGQDFTAGLVRMGILPRLRYLLETDP+AALEEC++SILIAIVRH
Sbjct: 482 DNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTAALEECIVSILIAIVRH 541
Query: 177 SPSCANAVLKCQRLIQTIVHRFTVDNIEIRSSMIKSVKLLKVLARSDRKTCLEFVKNGYF 236
SPSCANAVLKC+RLIQTIV RFTV N EIRSSMIKSVKLLKVLAR DRKTCLEF+KNGYF
Sbjct: 542 SPSCANAVLKCERLIQTIVQRFTVGNFEIRSSMIKSVKLLKVLARLDRKTCLEFIKNGYF 601
Query: 237 QAMTWNLYQYPPSIDHWLKLGKEKCKLGSALIVEQLQFWRVCIQYGYCVSYFSEMFPALC 296
AMTWNLYQ P SID WLKLGKEKCKL SAL +EQL+FWRVCI+YGYCVS+FS++FPALC
Sbjct: 602 NAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFSKIFPALC 661
Query: 297 FWLNPPSFKKLIENNVLCESTSISRETYLVLESLAGRLPNLFSQQCLNNQLPESSGGAEV 356
FWL+ PSF+KL +NNVL EST ISRE YLVLESLA RL NLFSQQCL NQ PES+ AE
Sbjct: 662 FWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAERLRNLFSQQCLTNQHPESTDDAEF 721
Query: 357 WSWSYVRPMVDLAIKWIASRNDPEVSKLFEGQEEGICDFTLGDLSATPLLWVYAAVTDML 416
WSWSYV PMVDLAIKWIA R+DPEV KLFEGQEEG+ FTLGDLS+TPLLWVYAAVT ML
Sbjct: 722 WSWSYVGPMVDLAIKWIARRSDPEVYKLFEGQEEGVNHFTLGDLSSTPLLWVYAAVTHML 781
Query: 417 FRVLERVTLEDAINLPEGNGLVPWLPDFVPKIGLDFIKYWHLGFSVSAGTKCGKYSRGGS 476
FRVLE+VTL DAI+L E NG VPWLP FVPKIGL+ I YWHLGFSV++ TK G+ S S
Sbjct: 782 FRVLEKVTLGDAISLQEANGHVPWLPKFVPKIGLELINYWHLGFSVASVTKSGRDSGDES 841
Query: 477 FMEELIYLRQKGDIEMSLASTCCLNGMIKVITSMDNLIQSCKTDIGSLPYEEQRLSGEEK 536
FM+ELI+LRQKGDIEMSLASTCCLNG+I VIT +DNLI+S KT I + P EQ LS E K
Sbjct: 842 FMKELIHLRQKGDIEMSLASTCCLNGIINVITKIDNLIRSAKTGICNPPVTEQSLSKEGK 901
Query: 537 VLKEGIVSRCLVDLRSMLNFFMFSVSSGWHCMQSIEIXXXXXXXXXXXXXXXXXXXXXXS 596
VL+EGIVSRCLV+LRSML+ F FS SSGW MQSIEI S
Sbjct: 902 VLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRGGPAPGMGVGWGAHGGGFWS 961
Query: 597 KTVLLMQTDARFLIYLLETFKNASKDVPETEEKTSTMQRVKTALELYLTAGPRDKVALEK 656
KTVL ++TDAR L+ LL+ F+N S D PETE+ T +MQ+V TAL L LTAGP D V +EK
Sbjct: 962 KTVLPVKTDARLLVCLLQIFENTSNDAPETEQMTFSMQQVNTALGLCLTAGPADMVVIEK 1021
Query: 657 TLDLLFDVSVLKYLDLCIQNFLLNRRGKTFGWQHEEEDYMHFSRTLSSHFRSRWLXXXXX 716
TLDLLF VS+LKYLDLCIQNFLLNRRGK FGW++E++DYMHFSR LSSHFRSRWL
Sbjct: 1022 TLDLLFHVSILKYLDLCIQNFLLNRRGKAFGWKYEDDDYMHFSRMLSSHFRSRWLSVRVK 1081
Query: 717 XXXXXXXXXXXXXXNPKFDACLDTIYEDSDMPSTRSPCSNSLMVEWAKQKLPLPLHFYLS 776
PK D LDTIYEDSDM ST SPC NSLM+EWA+Q LPLP+HFYLS
Sbjct: 1082 SKAVDGSSSSGVKATPKADVRLDTIYEDSDMSSTTSPCCNSLMIEWARQNLPLPVHFYLS 1141
Query: 777 PISTIFHSKRAGPLKANSVHRVDPDMHDLANLREVSKCGLFFVLGIEAM-TIQDTEIPSP 835
PISTI +KRAGP K SVH + HD ANL EV+KCGLFFVLGIE M + T IPSP
Sbjct: 1142 PISTIPLTKRAGPQKVGSVH----NPHDPANLLEVAKCGLFFVLGIETMSSFIGTGIPSP 1197
Query: 836 IQHVSLTWKLHSLSVNFLVGMEILEQDQDRETFEALQDLYGELLDKARLNQSK---SDDK 892
IQ VSLTWKLHSLSVNFLVGMEILEQDQ RETFEALQDLYGELLDK R NQ+K SDDK
Sbjct: 1198 IQRVSLTWKLHSLSVNFLVGMEILEQDQGRETFEALQDLYGELLDKERFNQNKEAISDDK 1257
Query: 893 KDIEFLKFQSEIHEGYSIVIDDLVEQFSAISYGDMIFGRQISLYLHRCVEASTRLLAWNT 952
K IEFL+F+S+IHE YS I++LVEQFS+ISYGD+IFGRQ+S+YLH CVE+S RL WNT
Sbjct: 1258 KHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNT 1317
Query: 953 LSNAHVLELLPPLEKCFSAAEGYLEPTEDNERILEAYAKSWVSDSLDRAVIRGTVSYTLV 1012
LSNA VLELLPPLEKCFS AEGYLEP EDNE ILEAYAKSWVSD+LDRA IRG+VSYT+
Sbjct: 1318 LSNARVLELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMA 1377
Query: 1013 VHHLSSFIFNACPVDKXXXXXXXXXXXXXDYAGKQRHEGMLLNLIHHNKSPKSDTDEQL- 1071
VHHLSSFIFNACPVDK DYAGKQ+HEGML+NLI HN+ S+ DEQL
Sbjct: 1378 VHHLSSFIFNACPVDKLLLRNNLVRSLLRDYAGKQQHEGMLMNLISHNRQSTSNMDEQLD 1437
Query: 1072 ----ENTWLEARLKVLTEACEGNSSLLTQVNKLKAAAEKSSL 1109
E +WLE+R+KVL EACEGNSSLL QV KLK AAEK+SL
Sbjct: 1438 GLLHEESWLESRMKVLIEACEGNSSLLIQVKKLKDAAEKNSL 1479
>Medtr1g031840.1 | hypothetical protein | HC | chr1:11190985-11184712
| 20130731
Length = 762
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/601 (66%), Positives = 441/601 (73%), Gaps = 18/601 (2%)
Query: 518 KTDIGSLPYEEQRLSGEEKVLKEGIVSRCLVDLRSMLNFFMFSVSSGWHCMQSIEIXXXX 577
K + P R G ++ E V VD RSML+ F FS SSGW MQSIEI
Sbjct: 171 KPTVVPFPVARHRSHGPTRLQSEVFV----VD-RSMLDVFTFSASSGWQRMQSIEIFGRG 225
Query: 578 XXXXXXXXXXXXXXXXXXSKTVLLMQTDARFLIYLLETFKNASKDVPETEEKTSTMQRVK 637
SKTVL +QTDAR L+ LL+ F+N S D PETE+ T +MQRV
Sbjct: 226 GPAPGMGVGWGAHGGGFWSKTVLPVQTDARLLVCLLQIFENTSNDAPETEQMTFSMQRVN 285
Query: 638 TALELYLTAGPRDKVALEKTLDLLFDVSVLKYLDLCIQNFLLNRRGKTFGWQHEEEDYMH 697
TAL L LTAGP D V +EKTLDLLF VS+LKYLDLCIQNFLLNRRGK FGW++E++DYMH
Sbjct: 286 TALGLCLTAGPADMVVIEKTLDLLFHVSILKYLDLCIQNFLLNRRGKAFGWKYEDDDYMH 345
Query: 698 FSRTLSSHFRSRWLXXXXXXXXXXXXXXXXXXXNPKFDACLDTIYEDSDMPSTRSPCSNS 757
FSR LSSHFRSRWL PK D LDTIYEDSDM ST SPC NS
Sbjct: 346 FSRMLSSHFRSRWLSVRVKSKAVDGSSSSGVKATPKADVRLDTIYEDSDMSSTTSPCCNS 405
Query: 758 LMVEWAKQKLPLPLHFYLSPISTIFHSKRAGPLKANSVHRVDPDMHDLANLREVSKCGLF 817
LM+EWA+Q LPLP+HFYLSPISTI +KRAGP K SVH + HD ANL EV+KCGLF
Sbjct: 406 LMIEWARQNLPLPVHFYLSPISTIPLTKRAGPQKVGSVH----NPHDPANLLEVAKCGLF 461
Query: 818 FVLGIEAMT-IQDTEIPSPIQHVSLTWKLHSLSVNFLVGMEILEQDQDRETFEALQDLYG 876
FVLGIE M+ T IPSPIQ VSLTWKLHSLSVNFLVGMEILEQDQ RETFEALQDLYG
Sbjct: 462 FVLGIETMSSFIGTGIPSPIQRVSLTWKLHSLSVNFLVGMEILEQDQGRETFEALQDLYG 521
Query: 877 ELLDKARLNQSK---SDDKKDIEFLKFQSEIHEGYSIVIDDLVEQFSAISYGDMIFGRQI 933
ELLDK R NQ+K SDDKK IEFL+F+S+IHE YS I++LVEQFS+ISYGD+IFGRQ+
Sbjct: 522 ELLDKERFNQNKEAISDDKKHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQV 581
Query: 934 SLYLHRCVEASTRLLAWNTLSNAHVLELLPPLEKCFSAAEGYLEPTEDNERILEAYAKSW 993
S+YLH CVE+S RL WNTLSNA VLELLPPLEKCFS AEGYLEP EDNE ILEAYAKSW
Sbjct: 582 SVYLHCCVESSIRLATWNTLSNARVLELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSW 641
Query: 994 VSDSLDRAVIRGTVSYTLVVHHLSSFIFNACPVDKXXXXXXXXXXXXXDYAGKQRHEGML 1053
VSD+LDRA IRG+VSYT+ VHHLSSFIFNACPVDK DYAGKQ+HEGML
Sbjct: 642 VSDALDRAEIRGSVSYTMAVHHLSSFIFNACPVDKLLLRNRLVRSLLRDYAGKQQHEGML 701
Query: 1054 LNLIHHNKSPKSDTDEQL-----ENTWLEARLKVLTEACEGNSSLLTQVNKLKAAAEKSS 1108
+NLI HNK S+ DEQL E +WLE+R+KVL EACEGNSSLLTQV KLK AAEK+S
Sbjct: 702 MNLISHNKQSTSNMDEQLDGLLHEESWLESRMKVLNEACEGNSSLLTQVKKLKDAAEKNS 761
Query: 1109 L 1109
L
Sbjct: 762 L 762
>Medtr1g031850.1 | hypothetical protein | HC | chr1:11194196-11193825
| 20130731
Length = 75
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 53/70 (75%)
Query: 981 DNERILEAYAKSWVSDSLDRAVIRGTVSYTLVVHHLSSFIFNACPVDKXXXXXXXXXXXX 1040
DNE ILEAYAKSWVSD+LDRA IRG+VSYT+ VHHLSSFIFNAC VDK
Sbjct: 2 DNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACHVDKLLLHNRLVRSLL 61
Query: 1041 XDYAGKQRHE 1050
DYAGKQ+HE
Sbjct: 62 RDYAGKQQHE 71
>Medtr2g060580.1 | hypothetical protein | HC |
chr2:25705891-25705530 | 20130731
Length = 94
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 67/113 (59%), Gaps = 23/113 (20%)
Query: 856 MEILEQDQDRETFEALQDLYGELLDKARLNQSKSDDKKDIEFLKFQSEIHEGYSIVIDDL 915
MEILEQ+Q G L+ R+ S+ + YSI I+D
Sbjct: 1 MEILEQNQG-----------GILMKIYRIFMVNSNPR------------FTSYSIFIEDP 37
Query: 916 VEQFSAISYGDMIFGRQISLYLHRCVEASTRLLAWNTLSNAHVLELLPPLEKC 968
VEQFSAISYGD+IF ++ISLYLHR VE S L WNTLSNA VLELLPPLEKC
Sbjct: 38 VEQFSAISYGDLIFAQKISLYLHRYVETSIPLATWNTLSNARVLELLPPLEKC 90
>Medtr2g060610.1 | hypothetical protein | LC |
chr2:25709152-25707417 | 20130731
Length = 117
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 52/76 (68%), Gaps = 12/76 (15%)
Query: 177 SPSCANAVLKCQRLIQTIVHRFTVDNIEIRSSMIKSVKLL------------KVLARSDR 224
+ CANA LKCQ LI TIV RFTV N EI+SS IKSVKLL KVLA +R
Sbjct: 42 TQGCANAALKCQMLILTIVQRFTVGNFEIQSSRIKSVKLLKRIIQMFDMILVKVLAWLER 101
Query: 225 KTCLEFVKNGYFQAMT 240
KTCLEF+KNGYF AMT
Sbjct: 102 KTCLEFIKNGYFNAMT 117
>Medtr2g060590.1 | hypothetical protein | HC |
chr2:25706545-25706163 | 20130731
Length = 109
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
Query: 646 AGPRDKVALEKTLDLLFDVSVLKYLDLCIQNFLLNRRG-KTFGWQHEEEDYMHFSRTLSS 704
GP D VA+E+TLDLLF VS+LKYL+LCIQ F N+RG K F WQ
Sbjct: 18 TGPGDMVAIEQTLDLLFHVSILKYLELCIQKFPRNKRGKKAFRWQ--------------- 62
Query: 705 HFRSRWLXXXXXXXXXXXXXXXXXXXNPKFDACLDTIYEDSDMPSTRS 752
SRWL K DA LDTIYEDSDM RS
Sbjct: 63 ---SRWLSVKVKSKAVDDISSFSIKATLKADAHLDTIYEDSDMSLMRS 107
>Medtr2g060600.1 | hypothetical protein | LC |
chr2:25707297-25706710 | 20130731
Length = 109
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 19/91 (20%)
Query: 429 INLPEGNGLVPWLPDFVPKIGLDFIKYWHLGFSVSAGTKCGKYSRGGSFMEELIYLRQKG 488
I+ E NG VPW+P+FVPKIGL+ I+ L F G F +++ ++
Sbjct: 38 ISREEANGHVPWIPEFVPKIGLELIEI--LAF--------------GLFRDKI---QKDF 78
Query: 489 DIEMSLASTCCLNGMIKVITSMDNLIQSCKT 519
D EMSLASTCCLNGMI +IT +DNLI+S KT
Sbjct: 79 DTEMSLASTCCLNGMINIITEIDNLIRSAKT 109
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 285 VSYFSEMFPALCFWLNPPSFKKLIENNVLCESTSISRE 322
+SYFSE+F A FWL+ PSF+KLI N+VL EST ISRE
Sbjct: 4 LSYFSEIFHAFSFWLDLPSFEKLINNDVLYESTCISRE 41
>Medtr2g060565.1 | hypothetical protein | LC |
chr2:25700530-25701919 | 20130731
Length = 156
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 41/57 (71%)
Query: 633 MQRVKTALELYLTAGPRDKVALEKTLDLLFDVSVLKYLDLCIQNFLLNRRGKTFGWQ 689
MQR TALEL L AGP D V +E++LDLLF V VLKY DLC QNFL +RR + W+
Sbjct: 1 MQRNNTALELCLMAGPGDMVVIERSLDLLFHVFVLKYFDLCTQNFLSSRRALSLTWK 57