Miyakogusa Predicted Gene

Lj2g3v1227800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1227800.1 Non Characterized Hit- tr|A5AXI3|A5AXI3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.43,0.0000001,seg,NULL,CUFF.36526.1
         (306 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g046750.1 | plant/F4N2-9 protein, putative | HC | chr5:204...   262   4e-70

>Medtr5g046750.1 | plant/F4N2-9 protein, putative | HC |
           chr5:20489318-20487485 | 20130731
          Length = 292

 Score =  262 bits (669), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 166/315 (52%), Positives = 185/315 (58%), Gaps = 40/315 (12%)

Query: 1   MSITGLI-DPEMNH-KKSFHLRNDSGELDVFEAARYFSGYNEVVGY-TGSTLAQKIMREE 57
           MS+ GLI D EMNH KKSFH RNDSGELDVFEA+RYFSGYNEV+GY   ST  QKIMREE
Sbjct: 1   MSLAGLIIDQEMNHNKKSFHRRNDSGELDVFEASRYFSGYNEVIGYNNSSTFTQKIMREE 60

Query: 58  RHGHRARISLDMPMRSLLPQQF---XXXXXXXXXXXXXXPSSPGGRLASFLNSLFNQXXX 114
           R+G++ RISLDMPMRSLLPQQF                 PSSPGGRLASFLNSLFNQ   
Sbjct: 61  RNGYKGRISLDMPMRSLLPQQFHGGIDQKQMKEKKHNKQPSSPGGRLASFLNSLFNQ-ST 119

Query: 115 XXXXXXXXXXXXXDEDESPGXXXXXXXXXXXXXXXXXXXXXXXXX------XPPYVLQTP 168
                        DEDESPG                                PPYV  TP
Sbjct: 120 SKKKSKSSSQSMKDEDESPGGRRRRRSSISHFRSSSTADSRSIYSLNSGFRTPPYV-NTP 178

Query: 169 TKSCKEFRT-SSDHKHTVPLPTKLNGHAKQNTLQNELKKDSTFLDDKYKHSNNGLSEKQK 227
           TK C+EF+T  SD K+ V L           TLQNEL       DDK K  +N     +K
Sbjct: 179 TKGCREFKTLLSDQKNEVSL------KKSSTTLQNEL-----CWDDKKKRDSNLKQFVEK 227

Query: 228 NWGNELLEKDRTWLEKYSLEEKDIRKFNEVDDGAESDSSSDLFELQNYDLGYCSSGLPVY 287
            +              Y  E++++RKFNEVDDGAESDSSSDLFELQNY+L + SSGLPVY
Sbjct: 228 KY--------------YEEEKREVRKFNEVDDGAESDSSSDLFELQNYELSHYSSGLPVY 273

Query: 288 ETTNMDNIKRGAPIS 302
           ETTNMDNIKRG+ IS
Sbjct: 274 ETTNMDNIKRGSTIS 288