Miyakogusa Predicted Gene

Lj2g3v1203450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1203450.1 tr|I3T8R8|I3T8R8_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=4
SV=1,95.45,3e-17,FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; FKBP_C,Peptidyl-prolyl cis-trans,CUFF.36495.1
         (46 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053470.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ...    68   2e-12
Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    65   1e-11
Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    56   6e-09

>Medtr7g053470.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
          HC | chr7:18851017-18844062 | 20130731
          Length = 544

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 32/36 (88%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          E+GDEV VHYTGTLLDGTKFDSSR R  PF+FTLGQ
Sbjct: 50 ESGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQ 85


>Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
          protein | HC | chr8:3497984-3493093 | 20130731
          Length = 575

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 31/36 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          + GDEV+VHYTGTLLDGTKFDSSR R   FNFTLGQ
Sbjct: 56 DVGDEVHVHYTGTLLDGTKFDSSRDRGTTFNFTLGQ 91


>Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
          protein | HC | chr8:34977709-34974074 | 20130731
          Length = 570

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/34 (73%), Positives = 26/34 (76%)

Query: 11 GDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQ 44
          GD+V VHYTG LLDGTKFDSSR R   F F LGQ
Sbjct: 56 GDQVEVHYTGILLDGTKFDSSRDRGTTFKFKLGQ 89