Miyakogusa Predicted Gene

Lj2g3v1203370.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1203370.1 Non Characterized Hit- tr|G7IWD8|G7IWD8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,32.72,4e-18,
,CUFF.36496.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain ...    52   6e-07
Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain ...    52   6e-07
Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731          52   7e-07

>Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr8:5709180-5705508 | 20130731
          Length = 694

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQWISLLTVR 216
            D I +D W   +  R
Sbjct: 142 YDFIDEDIWQEFIRTR 157


>Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr2:16185805-16182137 | 20130731
          Length = 694

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQWISLLTVR 216
            D I +D W   +  R
Sbjct: 142 YDFIDEDIWQEFIRTR 157


>Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731
          Length = 681

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 82  RLRLRDLK-KLPTGKKVVIEWNEEGQPVGEAFGLFLNYIYDLASNANKFPVNYDNWSAVP 140
           R R+++LK K   G+K+ IE+   G P GE    F   +   A       ++  +W++VP
Sbjct: 24  RTRMKNLKMKTAHGEKLPIEFQSNGLPSGENAKRFKLQVASFARECTSILIS--DWNSVP 81

Query: 141 STYKDRVWNDIIAVKFQVNDEEHKKWILSNMGEKWEENRSWLYHEYYDPSLDLEENIHWG 200
              KD +W  I A     ND+  KK  +S  GE+W+  +  L   Y     +++++    
Sbjct: 82  DATKDEIWKSITAKWDMPNDKIVKKKTISYAGERWKAFKYSLTSRYLFDGENIDKSPMET 141

Query: 201 PDSIPKDQWISLLTVR 216
            D I +D W   +  R
Sbjct: 142 YDFIDEDIWQEFIRTR 157