Miyakogusa Predicted Gene

Lj2g3v1198850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1198850.1 Non Characterized Hit- tr|I1J687|I1J687_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45787
PE,83.33,0,Cpn60_TCP1,Chaperonin Cpn60/TCP-1; RUBISCO SUBUNIT
BINDING-PROTEIN BETA SUBUNIT, RUBB,NULL; CHAPERON,CUFF.36469.1
         (247 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g017390.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   329   1e-90
Medtr1g017380.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   329   1e-90
Medtr1g090140.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   226   1e-59
Medtr1g090130.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   225   3e-59
Medtr4g057970.1 | ruBisCO large subunit-binding protein protein ...   222   2e-58
Medtr4g084130.2 | TCP-1/cpn60 chaperonin family protein | HC | c...   219   2e-57
Medtr4g084130.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   219   3e-57
Medtr8g017080.1 | TCP-1/cpn60 chaperonin family protein | HC | c...   215   3e-56

>Medtr1g017390.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:4833343-4839399 | 20130731
          Length = 591

 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 155/246 (63%), Positives = 210/246 (85%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           MI+EAL +VGR+GVVT+E+G+S EN L +VEGMQFDRGY+SP+FVTD  KMTVEF+NCKL
Sbjct: 206 MIAEALSKVGRKGVVTLEEGRSAENNLYVVEGMQFDRGYISPYFVTDSEKMTVEFENCKL 265

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           LLVDKKI+NA++L+NIL+ + R  +P++I++E IE+EALA ++ NKL GSLK+AA+KAP 
Sbjct: 266 LLVDKKISNARDLINILEDAIRNGFPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPG 325

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FGERK+ YL+DIAILTGGTVIRE++G +L KA   +LG+A K+V+T+++T IV DGST+ 
Sbjct: 326 FGERKSQYLDDIAILTGGTVIREEVGLSLDKAGNEVLGTAAKVVLTKDTTTIVGDGSTQE 385

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
           AV KRV Q++  +E   ++++K+ LNERIA+LSGG+A++QVGA TE ELK+K+LR+EDAL
Sbjct: 386 AVTKRVSQIKNQIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 445

Query: 241 NATKGS 246
           NATK +
Sbjct: 446 NATKAA 451


>Medtr1g017380.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:4821544-4827364 | 20130731
          Length = 591

 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 155/246 (63%), Positives = 210/246 (85%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           MI+EAL +VGR+GVVT+E+G+S EN L +VEGMQFDRGY+SP+FVTD  KMTVEF+NCKL
Sbjct: 206 MIAEALSKVGRKGVVTLEEGRSAENNLYVVEGMQFDRGYISPYFVTDSEKMTVEFENCKL 265

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           LLVDKKI+NA++L+NIL+ + R  +P++I++E IE+EALA ++ NKL GSLK+AA+KAP 
Sbjct: 266 LLVDKKISNARDLINILEDAIRNGFPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPG 325

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FGERK+ YL+DIAILTGGTVIRE++G +L KA   +LG+A K+V+T+++T IV DGST+ 
Sbjct: 326 FGERKSQYLDDIAILTGGTVIREEVGLSLDKAGNEVLGTAAKVVLTKDTTTIVGDGSTQE 385

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
           AV KRV Q++  +E   ++++K+ LNERIA+LSGG+A++QVGA TE ELK+K+LR+EDAL
Sbjct: 386 AVTKRVSQIKNQIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 445

Query: 241 NATKGS 246
           NATK +
Sbjct: 446 NATKAA 451


>Medtr1g090140.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:40381503-40376286 | 20130731
          Length = 574

 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 175/246 (71%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           +I++A+ +VG+ GV+TI  GK+ +N LE+VEGM+ DRGY+SP+F+T++     E ++  +
Sbjct: 192 LIAKAMEKVGKEGVITIADGKTLQNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLI 251

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           ++ +KKI+N   ++ +L+++ +++ PL+IV+E +E +ALA ++ NKL   +KV AIKAP 
Sbjct: 252 IIHEKKISNINSIVKVLELALKKQRPLLIVAEDVESDALATLILNKLRAGIKVCAIKAPG 311

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FGE +   L+D+A+LTGG +I E++G  L K    M GS  KI I+++ T+I+     + 
Sbjct: 312 FGENRKSGLQDLAVLTGGQLITEELGMNLEKVDLEMFGSCKKITISKDDTVILDGAGDKK 371

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
           ++E+R  Q+R  VEN+  ++ K+ L ER+A+LSGG+A+L++G  +E E+ +K+ R+ DAL
Sbjct: 372 SIEERCEQIRSAVENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDAL 431

Query: 241 NATKGS 246
           NATK +
Sbjct: 432 NATKAA 437


>Medtr1g090130.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:40370583-40364703 | 20130731
          Length = 576

 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 173/246 (70%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           +I++A+ +VG+ GV+TI  GK+  N LE+VEGM+ DRGY+SP+F+T++     E ++  +
Sbjct: 192 LIAKAMEKVGKEGVITIADGKTLHNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLV 251

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           ++ +KKI++   ++ +L+++ +++ PL+IV+E IE +ALA ++ NKL   +KV AIKAP 
Sbjct: 252 IIHEKKISSLNAIVKVLELALKKQRPLLIVAEDIESDALATLILNKLRAGIKVCAIKAPG 311

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FGE +   L+D+A+LTGG +I ED+G  L K    M GS  KI I+++ T+I+     + 
Sbjct: 312 FGENRKSGLQDLAVLTGGQLITEDLGHNLEKVDLEMFGSCKKITISKDDTVILDGAGDKK 371

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
           A+E+R  Q+R  VEN+  ++ +  L ER+A+LSGG+A+L++G  +E E+ +K+ R+ DAL
Sbjct: 372 AIEERCEQIRSAVENSTSDYDRDKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDAL 431

Query: 241 NATKGS 246
           NATK +
Sbjct: 432 NATKAA 437


>Medtr4g057970.1 | ruBisCO large subunit-binding protein protein |
           HC | chr4:21470747-21466740 | 20130731
          Length = 587

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 170/243 (69%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           MI+EA+ +VG  GV++IE   S E T+E+ EGM+ DRGY+SP FVT+  K  VEF+N ++
Sbjct: 206 MIAEAIGKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNLEKSIVEFENARV 265

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           L+ D+KI+  K+++ +L+ + + + PL+I++E I  EALA ++ NKL G L VAAIKAP 
Sbjct: 266 LITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGILNVAAIKAPG 325

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FGER+   L+DIAILTG      D+G  +   S   LG A K+ I+++ST I+ D +++ 
Sbjct: 326 FGERRKALLQDIAILTGAEFQASDLGLLVESTSIEQLGLARKVTISKDSTTIIADAASKD 385

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
            ++ RV QL++ +  T   +  + L ERIA+LSGG+A+++VGA TE EL+D++LRIEDA 
Sbjct: 386 ELQSRVAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAK 445

Query: 241 NAT 243
           NAT
Sbjct: 446 NAT 448


>Medtr4g084130.2 | TCP-1/cpn60 chaperonin family protein | HC |
           chr4:32768872-32774716 | 20130731
          Length = 467

 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 174/244 (71%), Gaps = 2/244 (0%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           +I+EA+ ++G  GV+TIE  +S+E ++ I EGM+ DRGY+SPHF+T++ K  VEF N K+
Sbjct: 86  LIAEAIEKIGFDGVITIESSRSSETSVVIEEGMKIDRGYMSPHFITNQEKSIVEFDNAKV 145

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           L+ D+KI++ +E++ +L+ + +   PL+I++E +  + L  ++ NK+ G L+VAA+K P 
Sbjct: 146 LVTDQKISSVREIVPLLEKAMQLSAPLLIIAEDVTAQVLETLIVNKMQGLLRVAAVKCPG 205

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
            G+ K   L+DIA++TG   +  D+G TL   ++  LGSA K+ IT N+T I  D +T+ 
Sbjct: 206 LGDGKKALLQDIALMTGADFLCGDLGLTLEGTTSDQLGSALKVKITSNATTIFADPNTKA 265

Query: 181 AVEKRVYQLRR-LVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDA 239
            ++ R+ Q+++ L+E    N  +K L+ERIA+L+GGIA+++VGA TE+EL+D++LRIEDA
Sbjct: 266 EIQARILQIKKDLIETDNANHSRK-LSERIAKLTGGIAVIKVGAHTELELEDRKLRIEDA 324

Query: 240 LNAT 243
            NAT
Sbjct: 325 KNAT 328


>Medtr4g084130.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr4:32768836-32775738 | 20130731
          Length = 579

 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 174/244 (71%), Gaps = 2/244 (0%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           +I+EA+ ++G  GV+TIE  +S+E ++ I EGM+ DRGY+SPHF+T++ K  VEF N K+
Sbjct: 198 LIAEAIEKIGFDGVITIESSRSSETSVVIEEGMKIDRGYMSPHFITNQEKSIVEFDNAKV 257

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           L+ D+KI++ +E++ +L+ + +   PL+I++E +  + L  ++ NK+ G L+VAA+K P 
Sbjct: 258 LVTDQKISSVREIVPLLEKAMQLSAPLLIIAEDVTAQVLETLIVNKMQGLLRVAAVKCPG 317

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
            G+ K   L+DIA++TG   +  D+G TL   ++  LGSA K+ IT N+T I  D +T+ 
Sbjct: 318 LGDGKKALLQDIALMTGADFLCGDLGLTLEGTTSDQLGSALKVKITSNATTIFADPNTKA 377

Query: 181 AVEKRVYQLRR-LVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDA 239
            ++ R+ Q+++ L+E    N  +K L+ERIA+L+GGIA+++VGA TE+EL+D++LRIEDA
Sbjct: 378 EIQARILQIKKDLIETDNANHSRK-LSERIAKLTGGIAVIKVGAHTELELEDRKLRIEDA 436

Query: 240 LNAT 243
            NAT
Sbjct: 437 KNAT 440


>Medtr8g017080.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr8:5738864-5745918 | 20130731
          Length = 576

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 102/246 (41%), Positives = 166/246 (67%)

Query: 1   MISEALHQVGRRGVVTIEKGKSTENTLEIVEGMQFDRGYLSPHFVTDKGKMTVEFQNCKL 60
           +I+ A+ +VG+ GV+T+  G + +N LE+VEGM+  RGY+SP+F+TD+     E +N  +
Sbjct: 193 LIARAMEKVGKEGVITVADGNTVDNELEVVEGMKLSRGYISPYFITDQKTQKCELENPFI 252

Query: 61  LLVDKKITNAKELLNILKISWREKYPLVIVSEGIEEEALAPVLKNKLNGSLKVAAIKAPA 120
           L+ DKKI++   LL +L++S   K PL++V+E ++ +ALA ++ NK +  LKV AIKAP 
Sbjct: 253 LIHDKKISDMGSLLKVLELSVTNKRPLLVVAEDVDSDALAMLILNKHHAGLKVCAIKAPG 312

Query: 121 FGERKTHYLEDIAILTGGTVIREDMGFTLAKASTGMLGSATKIVITQNSTLIVTDGSTRV 180
           FG+ +   L+D+AILTGG VI E+ G  L K    MLG+A KI ++ + T+++  G  + 
Sbjct: 313 FGDNRRASLDDLAILTGGEVITEERGIPLDKVRPEMLGTAKKITVSIDDTIVLHGGGDKK 372

Query: 181 AVEKRVYQLRRLVENTVENFQKKILNERIARLSGGIAILQVGALTEVELKDKQLRIEDAL 240
            +E+R  QLR  + N+   F K+   ER+++LSGG+A+ +VG  +E E+ +++ R+ DAL
Sbjct: 373 FIEERCVQLRDAMHNSSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDAL 432

Query: 241 NATKGS 246
           NAT+ +
Sbjct: 433 NATRAA 438