Miyakogusa Predicted Gene

Lj2g3v1196750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1196750.1 CUFF.36478.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g088775.1 | hypothetical protein | HC | chr4:35391967-3538...   291   1e-79
Medtr0227s0030.1 | transmembrane protein, putative | HC | scaffo...   291   2e-79
Medtr4g088775.2 | hypothetical protein | HC | chr4:35391966-3538...   275   1e-74
Medtr4g073910.1 | hypothetical protein | HC | chr4:28084194-2808...   232   1e-61
Medtr4g073910.2 | hypothetical protein | HC | chr4:28084285-2809...   222   1e-58

>Medtr4g088775.1 | hypothetical protein | HC |
           chr4:35391967-35385465 | 20130731
          Length = 160

 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/159 (87%), Positives = 151/159 (94%)

Query: 1   MDVDSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIE 60
           MDVDSQP MEETILVGDDLM GPPSP+VPPEIASHVL GVD+CDGILRN+FLCLQINDIE
Sbjct: 1   MDVDSQPGMEETILVGDDLMMGPPSPIVPPEIASHVLQGVDLCDGILRNLFLCLQINDIE 60

Query: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLI 120
           PFCQDEIALYKQCAERRDKEIRKRLQDSE KLGSSMPLD AKER+AQLEAEVT+LERRLI
Sbjct: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSEFKLGSSMPLDAAKERSAQLEAEVTSLERRLI 120

Query: 121 LASGLEGMEGFRQRWSLHGRLTDSKKRLQFLKQGIEGRN 159
           LASG++G+EGFR RWSLHGRLTDSKKRL+ LK+G++GR 
Sbjct: 121 LASGVQGIEGFRTRWSLHGRLTDSKKRLESLKKGMDGRK 159


>Medtr0227s0030.1 | transmembrane protein, putative | HC |
           scaffold0227:18874-9378 | 20130731
          Length = 417

 Score =  291 bits (745), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 147/158 (93%)

Query: 1   MDVDSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIE 60
           MDVDSQP MEETILVGDDLM GPPSP+VPPEIASHVL GVD+CDGILRN+FLCLQINDIE
Sbjct: 258 MDVDSQPGMEETILVGDDLMMGPPSPIVPPEIASHVLQGVDLCDGILRNLFLCLQINDIE 317

Query: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLI 120
           PFCQDEIALYKQCAERRDKEIR RLQDSE KLGSSMPLD AKER+ QLEAEVT+LER LI
Sbjct: 318 PFCQDEIALYKQCAERRDKEIRNRLQDSEFKLGSSMPLDAAKERSTQLEAEVTSLERHLI 377

Query: 121 LASGLEGMEGFRQRWSLHGRLTDSKKRLQFLKQGIEGR 158
           LASG++G+EGFR RWSLHGRLTDSKKRL+ LKQG++ R
Sbjct: 378 LASGVQGIEGFRTRWSLHGRLTDSKKRLESLKQGMDER 415


>Medtr4g088775.2 | hypothetical protein | HC |
           chr4:35391966-35386451 | 20130731
          Length = 145

 Score =  275 bits (703), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 131/145 (90%), Positives = 139/145 (95%)

Query: 1   MDVDSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIE 60
           MDVDSQP MEETILVGDDLM GPPSP+VPPEIASHVL GVD+CDGILRN+FLCLQINDIE
Sbjct: 1   MDVDSQPGMEETILVGDDLMMGPPSPIVPPEIASHVLQGVDLCDGILRNLFLCLQINDIE 60

Query: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLI 120
           PFCQDEIALYKQCAERRDKEIRKRLQDSE KLGSSMPLD AKER+AQLEAEVT+LERRLI
Sbjct: 61  PFCQDEIALYKQCAERRDKEIRKRLQDSEFKLGSSMPLDAAKERSAQLEAEVTSLERRLI 120

Query: 121 LASGLEGMEGFRQRWSLHGRLTDSK 145
           LASG++G+EGFR RWSLHGRLTDSK
Sbjct: 121 LASGVQGIEGFRTRWSLHGRLTDSK 145


>Medtr4g073910.1 | hypothetical protein | HC |
           chr4:28084194-28089777 | 20130731
          Length = 164

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/135 (83%), Positives = 122/135 (90%), Gaps = 4/135 (2%)

Query: 4   DSQPTMEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIEPFC 63
           DSQP+MEETILVGDDLM G PSP    EIASHVL GVD+CDGILRN+FL LQINDIEPFC
Sbjct: 20  DSQPSMEETILVGDDLMMGSPSP----EIASHVLQGVDLCDGILRNLFLSLQINDIEPFC 75

Query: 64  QDEIALYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLILAS 123
           QDEIALYKQCAERRDKEIRKRLQDSE KLGSSMPL  AK+R+ QLEAEVT+LERRLILAS
Sbjct: 76  QDEIALYKQCAERRDKEIRKRLQDSEFKLGSSMPLGAAKKRSTQLEAEVTSLERRLILAS 135

Query: 124 GLEGMEGFRQRWSLH 138
           G++G+EGFR RWSLH
Sbjct: 136 GVQGIEGFRTRWSLH 150


>Medtr4g073910.2 | hypothetical protein | HC |
           chr4:28084285-28090878 | 20130731
          Length = 140

 Score =  222 bits (565), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/130 (83%), Positives = 117/130 (90%), Gaps = 4/130 (3%)

Query: 9   MEETILVGDDLMTGPPSPVVPPEIASHVLHGVDMCDGILRNMFLCLQINDIEPFCQDEIA 68
           MEETILVGDDLM G PSP    EIASHVL GVD+CDGILRN+FL LQINDIEPFCQDEIA
Sbjct: 1   MEETILVGDDLMMGSPSP----EIASHVLQGVDLCDGILRNLFLSLQINDIEPFCQDEIA 56

Query: 69  LYKQCAERRDKEIRKRLQDSELKLGSSMPLDQAKERAAQLEAEVTTLERRLILASGLEGM 128
           LYKQCAERRDKEIRKRLQDSE KLGSSMPL  AK+R+ QLEAEVT+LERRLILASG++G+
Sbjct: 57  LYKQCAERRDKEIRKRLQDSEFKLGSSMPLGAAKKRSTQLEAEVTSLERRLILASGVQGI 116

Query: 129 EGFRQRWSLH 138
           EGFR RWSLH
Sbjct: 117 EGFRTRWSLH 126