Miyakogusa Predicted Gene
- Lj2g3v1193050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1193050.1 Non Characterized Hit- tr|I1J6U3|I1J6U3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,72.92,0,HLH,Helix-loop-helix domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; HLH, helix-loop-helix ,CUFF.36429.1
(444 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0194s0050.1 | transcription factor | HC | scaffold0194:2569... 426 e-119
Medtr1g082480.1 | basic helix loop helix (BHLH) DNA-binding fami... 159 5e-39
Medtr8g024210.1 | transcription factor | HC | chr8:8874219-88716... 157 2e-38
Medtr7g113830.1 | transcription factor | HC | chr7:46921384-4692... 155 7e-38
Medtr1g082480.2 | basic helix loop helix (BHLH) DNA-binding fami... 148 1e-35
Medtr2g022280.1 | basic helix loop helix (BHLH) DNA-binding fami... 140 3e-33
Medtr1g028470.1 | basic helix loop helix (BHLH) DNA-binding fami... 135 1e-31
Medtr3g099620.1 | basic helix loop helix (BHLH) DNA-binding fami... 110 2e-24
Medtr5g064950.2 | basic helix loop helix (BHLH) DNA-binding fami... 103 3e-22
Medtr5g064950.1 | basic helix loop helix (BHLH) DNA-binding fami... 103 3e-22
Medtr8g066770.1 | transcription factor | HC | chr8:27763142-2776... 103 4e-22
Medtr3g090850.1 | transcription factor | HC | chr3:41256456-4125... 91 3e-18
Medtr8g067280.1 | basic helix loop helix (bHLH) family transcrip... 57 3e-08
Medtr1g072320.1 | bHLH transcription factor | HC | chr1:32103626... 56 8e-08
>Medtr0194s0050.1 | transcription factor | HC |
scaffold0194:25693-27314 | 20130731
Length = 387
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/364 (67%), Positives = 265/364 (72%), Gaps = 41/364 (11%)
Query: 83 DKLSFADVVQFADFGPKLALNHQGKDNCEESGI-DPVYFLKFPVLNDKMEDQNLMVNPN- 140
DK+SFADV+QFADFGPKLALN EESGI DPVYFLKFPVLN+K+EDQNLM++ +
Sbjct: 63 DKMSFADVMQFADFGPKLALNR------EESGIEDPVYFLKFPVLNNKIEDQNLMLSGDD 116
Query: 141 GEGEEAEKNDERFNNLVSVDDTSRAXXXXXXXXXXXXXTTPDDNNSVXXXXXXXXFVGHE 200
G GE NDERF L SV+D SR D+NNSV
Sbjct: 117 GLGE----NDERFK-LTSVEDKSR------DQQDHEEARVSDENNSV------------- 152
Query: 201 DQQVQKSNVQENKNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGS 260
Q+ + VQEN KRKRPR+VKT+EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGS
Sbjct: 153 -QEKNCAVVQENNKKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGS 211
Query: 261 YVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLLGEAQSRQVENXXXXXXXXXXXXX 320
YVQRGDQASIIGGAIEFVR KRRRLLGEAQS+QV +
Sbjct: 212 YVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQSKQVGDSSLASTQQQPPFF 271
Query: 321 XXXXXXXXXVNDQMKQLVEMESGGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPG 380
NDQMK LVEME+G L+EETAESKS LADVEVKLLGFDAMIKILSRRRPG
Sbjct: 272 PATLP-----NDQMK-LVEMETG--LQEETAESKSCLADVEVKLLGFDAMIKILSRRRPG 323
Query: 381 QLIKIIAALEDLQLIILHTNITTIEQTVLYSFNVKVAGDSRFTAEDIASSVQQIVSFIHA 440
QLIK IAALED+QLIILHTNITTIEQTVLYSFNVKVA D+RFTAEDIASSVQQI+SFIHA
Sbjct: 324 QLIKTIAALEDMQLIILHTNITTIEQTVLYSFNVKVASDTRFTAEDIASSVQQILSFIHA 383
Query: 441 NISM 444
N SM
Sbjct: 384 NTSM 387
>Medtr1g082480.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:36677044-36674657 | 20130731
Length = 337
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 128/217 (58%), Gaps = 19/217 (8%)
Query: 226 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXX 285
EE+E+QRMTHIAVERNRRKQMNE+L +LRSLMP S++QRGDQASIIGGAI FV+
Sbjct: 129 EEIENQRMTHIAVERNRRKQMNEYLSILRSLMPDSHIQRGDQASIIGGAINFVK------ 182
Query: 286 XXXXXXKRRRLLGEAQSRQV---ENXXXXXXXXXXXXXXXXXXXXXXVNDQMKQLVEMES 342
+ LG + R V E V D S
Sbjct: 183 ---ELEHKFHFLGAKKERVVKSDEAGGSNNMPFSEFFTFPQYSTSGSVCDNSN------S 233
Query: 343 GGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNIT 402
+ E+ E +S +AD+EV ++ A +KI SR+RP QL+KI++ L++++L ILH N+T
Sbjct: 234 VATIGEKVGEIQSCIADIEVTMVENHANLKIRSRKRPKQLLKIVSGLQNMRLTILHLNVT 293
Query: 403 TIEQTVLYSFNVKVAGDSRF-TAEDIASSVQQIVSFI 438
TI + VLYS +VKV D + + +DIAS+V Q V+ I
Sbjct: 294 TIGEIVLYSLSVKVEDDCKLGSVDDIASAVYQTVTRI 330
>Medtr8g024210.1 | transcription factor | HC | chr8:8874219-8871607
| 20130731
Length = 365
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 121/219 (55%), Gaps = 27/219 (12%)
Query: 222 VKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXX 281
VK E+VE+QRMTHIAVERNRR+QMN+HL VLRSLMP SYVQRGDQASIIGGAI+FV+
Sbjct: 170 VKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPSSYVQRGDQASIIGGAIDFVKEL 229
Query: 282 XXXXXXXXXXKRRRLLGEAQSRQVENXXXXXXXXXXXXXXXXXXXXXXVNDQMKQLVEME 341
KR + ++ E E
Sbjct: 230 EQLLESLEAQKRIK-------------------KNEDFGSSSSSSPPSYGMKLSPYEENE 270
Query: 342 SGGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNI 401
+ E A+ K L V L KI +++ GQLIK+I ALE+L+L ILH NI
Sbjct: 271 VKAENKSEAADIKVTLIQTHVNL-------KIECKKKAGQLIKVIVALENLRLTILHLNI 323
Query: 402 TTIEQTVLYSFNVKVAGDSRF-TAEDIASSVQQIVSFIH 439
T+ E +VLYSFN+K+ D + TA DIA +V QI S+I+
Sbjct: 324 TSFESSVLYSFNLKIEEDCKLGTANDIAEAVHQIFSYIN 362
>Medtr7g113830.1 | transcription factor | HC |
chr7:46921384-46922800 | 20130731
Length = 316
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 17/234 (7%)
Query: 212 NKNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASII 271
+++K++R ++ K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASII
Sbjct: 95 SRSKKRRVKTSKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASII 154
Query: 272 GGAIEFVRXXXXXXXXXXXXKRRRLLGEAQSRQVENXXXXXXXXXXXXXXXXXXXXXXVN 331
GGAI FV+ ++ + LG Q ++ +
Sbjct: 155 GGAINFVK---------KLEQKLQFLG-VQKQKEGKFDTIVENKNKPFSEFFTFPQYSTS 204
Query: 332 DQMKQLVEMESGGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALED 391
D + + E + GG ++ +AD+EV ++ A +KI +++RP QL+K++++L
Sbjct: 205 DGVCESSETKMGGEVQSRN------IADIEVTMVESHANLKIRTKKRPKQLLKMVSSLHG 258
Query: 392 LQLIILHTNITTIEQTVLYSFNVKVAGDSRF-TAEDIASSVQQIVSFIHANISM 444
L L ILH N+TT ++ V YS +VKV D + + ++IA+++ QI+ I S+
Sbjct: 259 LCLTILHLNVTTADEFVFYSLSVKVEDDCKLGSVDEIAAAIYQILESIQQESSI 312
>Medtr1g082480.2 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:36677044-36674771 | 20130731
Length = 336
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 114/195 (58%), Gaps = 18/195 (9%)
Query: 226 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXX 285
EE+E+QRMTHIAVERNRRKQMNE+L +LRSLMP S++QRGDQASIIGGAI FV+
Sbjct: 129 EEIENQRMTHIAVERNRRKQMNEYLSILRSLMPDSHIQRGDQASIIGGAINFVK------ 182
Query: 286 XXXXXXKRRRLLGEAQSRQV---ENXXXXXXXXXXXXXXXXXXXXXXVNDQMKQLVEMES 342
+ LG + R V E V D S
Sbjct: 183 ---ELEHKFHFLGAKKERVVKSDEAGGSNNMPFSEFFTFPQYSTSGSVCDNSN------S 233
Query: 343 GGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNIT 402
+ E+ E +S +AD+EV ++ A +KI SR+RP QL+KI++ L++++L ILH N+T
Sbjct: 234 VATIGEKVGEIQSCIADIEVTMVENHANLKIRSRKRPKQLLKIVSGLQNMRLTILHLNVT 293
Query: 403 TIEQTVLYSFNVKVA 417
TI + VLYS +VKV
Sbjct: 294 TIGEIVLYSLSVKVC 308
>Medtr2g022280.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr2:7685904-7683445 | 20130731
Length = 195
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 28/206 (13%)
Query: 233 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXK 292
M+HIAVERNRR+QMNEHL+VLRSL P Y++RGDQASIIGG IEF+ K
Sbjct: 1 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFINELHQVLQALESQK 60
Query: 293 RRRLLGEAQSRQVENXXXXXXXXXXXXXXXXXXXXXXVNDQMKQLVEMESGG-----GLR 347
RR+ L + + + + Q ++ SGG +
Sbjct: 61 RRKSLSPSPGPSPKT----------------------LQPTLHQF-DISSGGIGTNNAFK 97
Query: 348 EETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQT 407
E A S +ADVEVK+ G + ++K++S+R PGQ+ +II LE L +LH NI+++E+T
Sbjct: 98 ELGASCNSSIADVEVKISGPNVILKVISQRIPGQVSRIITVLESLSFEVLHLNISSMEET 157
Query: 408 VLYSFNVKVAGDSRFTAEDIASSVQQ 433
VLY F VK+ + + E++A VQQ
Sbjct: 158 VLYQFVVKIELGCQLSLEELAMEVQQ 183
>Medtr1g028470.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:9631278-9629472 | 20130731
Length = 293
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 27/243 (11%)
Query: 206 KSNVQENKNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRG 265
++ + E K KR + V+ RM+HI VERNRRKQMNE L +L+SLMP YV+RG
Sbjct: 60 ETELAETSQKCKRQKIVEEQNNDGQHRMSHITVERNRRKQMNEQLSILKSLMPCFYVKRG 119
Query: 266 DQASIIGGAIEFVRXXXXXXXXXXXXKRRRLLGEAQ---------------SRQVENXXX 310
DQASI+ I+++ K+R++ E S + +
Sbjct: 120 DQASIVESVIDYINELHQLLQCLESKKQRKVYNEVPSPRPLPPSPRIIFPISPRTPSQWL 179
Query: 311 XXXXXXXXXXXXXXXXXXXVNDQMKQLVEMESGGGLREETAESKSLLADVEVKLLGFDAM 370
+ND + +LV S SL+ADVEVK G +
Sbjct: 180 QQCGGYLSSEPSPTSSASSINDNINELV------------GNSTSLVADVEVKFCGSHVL 227
Query: 371 IKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQTVLYSFNVKVAGDSRFTAEDIASS 430
+K +S R PGQ ++I++ LEDL+L I+H + T ++T+LY F +K+ + + +AE++A
Sbjct: 228 LKTVSSRIPGQALRIMSVLEDLRLEIVHVRVNTADETMLYLFTIKIGIECQLSAEELAQQ 287
Query: 431 VQQ 433
+QQ
Sbjct: 288 IQQ 290
>Medtr3g099620.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr3:45673320-45670902 | 20130731
Length = 321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 58/67 (86%)
Query: 213 KNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 272
+ KR+R +S K EE+E+QRMTHI VERNRRKQMNE+L VLRSLMP SYVQRGDQASIIG
Sbjct: 96 RRKRRRIKSAKNKEEIENQRMTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIG 155
Query: 273 GAIEFVR 279
GAI FV+
Sbjct: 156 GAINFVK 162
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 357 LADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQTVLYSFNVKV 416
+AD+EV ++ A +KILS+++PGQL+KI+ L++L+L ILH N+TT++ VLYS ++KV
Sbjct: 230 VADIEVTMVDSHANMKILSKKKPGQLMKIVVGLQNLRLTILHLNVTTVDDMVLYSVSIKV 289
Query: 417 AGDSRFTAED-IASSVQQIVSFIHANIS 443
S+ + D IA++V +++ + ++
Sbjct: 290 EEGSQLNSVDEIAAAVNRLLRTVQQELA 317
>Medtr5g064950.2 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr5:27301497-27299995 | 20130731
Length = 308
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 213 KNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 272
+ KR+ + K EE+ESQRMTHIAVERNRRKQMNE+L +L+SLMP SYVQRGDQASI+G
Sbjct: 80 RRKRRHTVNAKNKEEIESQRMTHIAVERNRRKQMNEYLDILKSLMPPSYVQRGDQASIVG 139
Query: 273 GAIEFVR 279
GAI F++
Sbjct: 140 GAINFLK 146
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 357 LADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQTVLYSFNVKV 416
+ D+EV L+ A IKI+ ++R GQ++K++A +++L ILH N+++++ VL S + KV
Sbjct: 210 MGDIEVTLVDSHANIKIMLKKRQGQVMKMVAGIQNLGFNILHLNVSSMDDNVLVSVSAKV 269
>Medtr5g064950.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr5:27301497-27299044 | 20130731
Length = 300
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 213 KNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 272
+ KR+ + K EE+ESQRMTHIAVERNRRKQMNE+L +L+SLMP SYVQRGDQASI+G
Sbjct: 80 RRKRRHTVNAKNKEEIESQRMTHIAVERNRRKQMNEYLDILKSLMPPSYVQRGDQASIVG 139
Query: 273 GAIEFVR 279
GAI F++
Sbjct: 140 GAINFLK 146
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 357 LADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQTVLYSFNVKV 416
+ D+EV L+ A IKI+ ++R GQ++K++A +++L ILH N+++++ VL S + KV
Sbjct: 210 MGDIEVTLVDSHANIKIMLKKRQGQVMKMVAGIQNLGFNILHLNVSSMDDNVLVSVSAKV 269
Query: 417 AGDSRF-TAEDIASSVQQI 434
SR T ++IA++V ++
Sbjct: 270 EEGSRLNTVDEIAAAVNEL 288
>Medtr8g066770.1 | transcription factor | HC |
chr8:27763142-27765450 | 20130731
Length = 312
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 222 VKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVR 279
K EE E+QR+THI VERNRRKQMNEHL VLRSLMP SYVQRGDQASI+GGAIEFV+
Sbjct: 103 CKNKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVK 160
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 350 TAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIILHTNITTIEQTVL 409
T+++K+ +AD+EV L+ A ++IL+R RPGQL K++A + L L ILH N+TTI+ V
Sbjct: 214 TSKTKAAIADIEVTLIETHANLRILTRTRPGQLTKLVAGFQRLFLSILHLNVTTIQPLVF 273
Query: 410 YSFNVKV-AGDSRFTAEDIASSVQQIVSFIHANISM 444
YS + KV G + + IA++V ++ I S+
Sbjct: 274 YSISAKVEEGFQLGSVDGIATAVHHLLGRIEEEASL 309
>Medtr3g090850.1 | transcription factor | HC |
chr3:41256456-41258644 | 20130731
Length = 329
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 211 ENKNKRKRPRSVKTT--EEVES----QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQR 264
E + KRKR + T E++ S QR++HI VERNRRKQMNEHL VLRSLMP YV+R
Sbjct: 73 ETEPKRKRQKLTPTLLEEQINSVDGQQRVSHITVERNRRKQMNEHLSVLRSLMPCFYVKR 132
Query: 265 GDQASIIGGAIEFVRXXXXXXXXXXXXKRRRLLGEAQS 302
GDQASIIGG ++++ K+R++ E S
Sbjct: 133 GDQASIIGGVVDYITELQQLLQALEAKKQRKVYSEVLS 170
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 13/105 (12%)
Query: 330 VNDQMKQLVEMESGGGLREETAESKSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAAL 389
VND + +LV A SKS +ADVEVK G ++K +S+R PGQ +KII+AL
Sbjct: 234 VNDNINELV------------ANSKSPIADVEVKFSGPHVLLKTVSQRIPGQPLKIISAL 281
Query: 390 EDLQLIILHTNI-TTIEQTVLYSFNVKVAGDSRFTAEDIASSVQQ 433
EDL L ILH NI +T + T+L SF +K+ + + +AE++A +QQ
Sbjct: 282 EDLALEILHVNINSTSDDTMLNSFTIKIGIECQLSAEELAQQIQQ 326
>Medtr8g067280.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr8:28079487-28082002 |
20130731
Length = 648
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 109/237 (45%), Gaps = 37/237 (15%)
Query: 209 VQENKNKRKRPRSVKTTEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQA 268
V+ K +KR R E + + H+ ER RR+++N+ LR+++P V + D+A
Sbjct: 440 VEPGKRPKKRGRKPANGRE---EPLNHVEAERQRREKLNQKFYALRAVVPN--VSKMDKA 494
Query: 269 SIIGGAIEFVRXXXXXXXXXXXXKRR--RLLGEAQSRQVENXXXXXXXXXXXXXXXXXXX 326
S++G AI ++ K + LG A +++E
Sbjct: 495 SLLGDAISYINELKSKLQGLESSKGELEKQLG-ATKKELE-------------------- 533
Query: 327 XXXVNDQMKQLVEMESGGGLREETAESKSLL-ADVEVKLLGFDAMIKILSRRRPGQLIKI 385
+Q + + ++ + S L+ D++VK++G+DAMI+I ++ K+
Sbjct: 534 LVASKNQSQNPIPLDKEKEKTTSSTSSSKLIDLDIDVKIMGWDAMIRIQCSKKNHPAAKL 593
Query: 386 IAALEDLQLIILHTNITTIEQTVLYSFNVKVAGDSRFTAEDIASSVQQIVSFIHANI 442
+AAL++L L + H +++ + ++ +V + SRF + +Q++S + + I
Sbjct: 594 MAALKELDLDVNHASVSVVNDLMIQQASVNMG--SRFYTQ------EQLLSLLSSKI 642
>Medtr1g072320.1 | bHLH transcription factor | HC |
chr1:32103626-32096191 | 20130731
Length = 656
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 82/164 (50%), Gaps = 25/164 (15%)
Query: 235 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRXXXXXXXXXXXXKRR 294
H+ ER RR+++NE +LRSL+P +V + D+ASI+G IE+++ RR
Sbjct: 471 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYLKQL-----------RR 517
Query: 295 RLLG-EAQSRQVENXXXXXXXXXXXXXXXXXXXXXXVNDQMKQLVEMESGGGLREETAES 353
++ E ++RQ+E K++ +E G R + E+
Sbjct: 518 KIQDLETRNRQIETEQQSRSGVTVLVGPTDK----------KKVRIVEECGATRAKAVET 567
Query: 354 KSLLADVEVKLLGFDAMIKILSRRRPGQLIKIIAALEDLQLIIL 397
+ +++ V+V ++ DA+++I R G L+ ++ L +L++ ++
Sbjct: 568 E-VVSSVQVSIIESDALLEIECLHREGLLLDVMVMLRELRIEVI 610