Miyakogusa Predicted Gene

Lj2g3v1182640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1182640.1 Non Characterized Hit- tr|I3S3K2|I3S3K2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,62.67,7e-16,seg,NULL; PSK,Phytosulfokine,CUFF.36383.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g106030.1 | phytosulfokine precursor protein | HC | chr1:4...    87   5e-18

>Medtr1g106030.1 | phytosulfokine precursor protein | HC |
          chr1:47964003-47964797 | 20130731
          Length = 83

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query: 23 YATRLGPASSSVISKSNQHGVLEEEMNSIEEACQDIGEDECLMRRTLAAHTDYIYTQKQK 82
          YA R GP SS +IS +NQ+ VLE++   IEE C+ I E++CLMRRTL AHTDYIYTQK+K
Sbjct: 23 YAGRHGPVSSPIISSNNQYEVLEDDKVDIEENCKSISEEDCLMRRTLVAHTDYIYTQKEK 82

Query: 83 P 83
          P
Sbjct: 83 P 83